RNA–Protein interactions for RNA: ENST00000506779.1

TOPBP1-205, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 536 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-205ENST00000506779 CD5LO43866 347 aa1.63□□□□□ -2.15
TOPBP1-205ENST00000506779 GGCTO75223 188 aaKnown RBP1.63□□□□□ -2.15
TOPBP1-205ENST00000506779 OR2J3O76001 311 aa1.63□□□□□ -2.15
TOPBP1-205ENST00000506779 IGKV1-17P01599 117 aa1.63□□□□□ -2.15
TOPBP1-205ENST00000506779 IL4P05112 153 aa1.63□□□□□ -2.15
TOPBP1-205ENST00000506779 CTSGP08311 255 aa1.63□□□□□ -2.15
TOPBP1-205ENST00000506779 OR10J4P0C629 311 aa1.63□□□□□ -2.15
TOPBP1-205ENST00000506779 RBMY1CP0DJD4 496 aa1.63□□□□□ -2.15
TOPBP1-205ENST00000506779 APELAP0DMC3 54 aa1.63□□□□□ -2.15
TOPBP1-205ENST00000506779 GALR1P47211 349 aa1.63□□□□□ -2.15
TOPBP1-205ENST00000506779 UBE2G2P60604 165 aa1.63□□□□□ -2.15
TOPBP1-205ENST00000506779 UBE2G1P62253 170 aa1.63□□□□□ -2.15
TOPBP1-205ENST00000506779 RANP62826 216 aaKnown RBP1.63□□□□□ -2.15
TOPBP1-205ENST00000506779 BLCAPP62952 87 aa1.63□□□□□ -2.15
TOPBP1-205ENST00000506779 PAFAH1B2P68402 229 aa1.63□□□□□ -2.15
TOPBP1-205ENST00000506779 BTN1A1Q13410 526 aa1.63□□□□□ -2.15
TOPBP1-205ENST00000506779 LY6EQ16553 131 aa1.63□□□□□ -2.15
TOPBP1-205ENST00000506779 COX19Q49B96 90 aa1.63□□□□□ -2.15
TOPBP1-205ENST00000506779 SAPCD1Q5SSQ6 148 aa1.63□□□□□ -2.15
TOPBP1-205ENST00000506779 CLEC19AQ6UXS0 136 aa1.63□□□□□ -2.15
TOPBP1-205ENST00000506779 MIR17HGQ75NE6 70 aa1.63□□□□□ -2.15
TOPBP1-205ENST00000506779 GPHB5Q86YW7 130 aa1.63□□□□□ -2.15
TOPBP1-205ENST00000506779 CYB561D1Q8N8Q1 229 aa1.63□□□□□ -2.15
TOPBP1-205ENST00000506779 C5orf17Q8NAS9 161 aa1.63□□□□□ -2.15
TOPBP1-205ENST00000506779 OR4X2Q8NGF9 303 aa1.63□□□□□ -2.15
TOPBP1-205ENST00000506779 ZNF502Q8TBZ5 544 aa1.63□□□□□ -2.15
TOPBP1-205ENST00000506779 C17orf50Q8WW18 174 aa1.63□□□□□ -2.15
TOPBP1-205ENST00000506779 FAM104AQ969W3 186 aa1.63□□□□□ -2.15
TOPBP1-205ENST00000506779 FXYD5Q96DB9 178 aa1.63□□□□□ -2.15
TOPBP1-205ENST00000506779 FMC1Q96HJ9 113 aa1.63□□□□□ -2.15
TOPBP1-205ENST00000506779 FAM167A-AS1Q96KT0 104 aa1.63□□□□□ -2.15
TOPBP1-205ENST00000506779 PGLYRP4Q96LB8 373 aa1.63□□□□□ -2.15
TOPBP1-205ENST00000506779 UBE2E2Q96LR5 201 aa1.63□□□□□ -2.15
TOPBP1-205ENST00000506779 HSPB9Q9BQS6 159 aa1.63□□□□□ -2.15
TOPBP1-205ENST00000506779 SLC50A1Q9BRV3 221 aa1.63□□□□□ -2.15
TOPBP1-205ENST00000506779 NDFIP1Q9BT67 221 aa1.63□□□□□ -2.15
TOPBP1-205ENST00000506779 SHANK2-AS3Q9BTD1 123 aa1.63□□□□□ -2.15
TOPBP1-205ENST00000506779 SCRT1Q9BWW7 348 aa1.63□□□□□ -2.15
TOPBP1-205ENST00000506779 SLC25A39Q9BZJ4 359 aaPredicted RBP1.63□□□□□ -2.15
TOPBP1-205ENST00000506779 DAZ1Q9NQZ3 744 aaKnown RBP1.63□□□□□ -2.15
TOPBP1-205ENST00000506779 OTORQ9NRC9 128 aa1.63□□□□□ -2.15
TOPBP1-205ENST00000506779 PEF1Q9UBV8 284 aaKnown RBP1.63□□□□□ -2.15
TOPBP1-205ENST00000506779 EPDR1Q9UM22 224 aa1.63□□□□□ -2.15
TOPBP1-205ENST00000506779 ZFP30Q9Y2G7 519 aa1.63□□□□□ -2.15
TOPBP1-205ENST00000506779 UFC1Q9Y3C8 167 aa1.63□□□□□ -2.15
TOPBP1-205ENST00000506779 SHANK1Q9Y566 2161 aa1.63□□□□□ -2.15
TOPBP1-205ENST00000506779 FBN3Q75N90 2809 aa1.63□□□□□ -2.15
TOPBP1-205ENST00000506779 TANC2Q9HCD6 1990 aa1.63□□□□□ -2.15
TOPBP1-205ENST00000506779 C2CD3Q4AC94 2353 aa1.63□□□□□ -2.15
TOPBP1-205ENST00000506779 CREBBPQ92793 2442 aa1.62□□□□□ -2.15
TOPBP1-205ENST00000506779 TRBV19A0A075B6N1 114 aa1.62□□□□□ -2.15
TOPBP1-205ENST00000506779 TRBV24-1A0A075B6N3 115 aa1.62□□□□□ -2.15
TOPBP1-205ENST00000506779 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP1.62□□□□□ -2.15
TOPBP1-205ENST00000506779 IGHV3-21A0A0B4J1V1 117 aa1.62□□□□□ -2.15
TOPBP1-205ENST00000506779 TRAV5A0A0B4J249 113 aa1.62□□□□□ -2.15
TOPBP1-205ENST00000506779 A0A1B0GUS0 222 aa1.62□□□□□ -2.15
TOPBP1-205ENST00000506779 MDFIC2A0A1B0GVS7 189 aa1.62□□□□□ -2.15
TOPBP1-205ENST00000506779 XKRY2A2RUG3 117 aa1.62□□□□□ -2.15
TOPBP1-205ENST00000506779 RBAKDNA6NC62 111 aa1.62□□□□□ -2.15
TOPBP1-205ENST00000506779 A8MWL6 223 aa1.62□□□□□ -2.15
TOPBP1-205ENST00000506779 C1orf196B1AJZ1 125 aa1.62□□□□□ -2.15
TOPBP1-205ENST00000506779 C9JQL5 133 aa1.62□□□□□ -2.15
TOPBP1-205ENST00000506779 H3BRN7 92 aa1.62□□□□□ -2.15
TOPBP1-205ENST00000506779 LGALS9O00182 355 aa1.62□□□□□ -2.15
TOPBP1-205ENST00000506779 PEX7O00628 323 aa1.62□□□□□ -2.15
TOPBP1-205ENST00000506779 RS1O15537 224 aa1.62□□□□□ -2.15
TOPBP1-205ENST00000506779 TCRAP04437 139 aa1.62□□□□□ -2.15
TOPBP1-205ENST00000506779 S100A8P05109 93 aa1.62□□□□□ -2.15
TOPBP1-205ENST00000506779 SLC25A5P05141 298 aaKnown RBP1.62□□□□□ -2.15
TOPBP1-205ENST00000506779 IGLC2P0DOY2 106 aa1.62□□□□□ -2.15
TOPBP1-205ENST00000506779 ADCYAP1P18509 176 aa1.62□□□□□ -2.15
TOPBP1-205ENST00000506779 RAB5AP20339 215 aa1.62□□□□□ -2.15
TOPBP1-205ENST00000506779 CRYBB3P26998 211 aa1.62□□□□□ -2.15
TOPBP1-205ENST00000506779 PSMB8P28062 276 aa1.62□□□□□ -2.15
TOPBP1-205ENST00000506779 MYCNOSP40205 109 aa1.62□□□□□ -2.15
TOPBP1-205ENST00000506779 AKR1C3P42330 323 aa1.62□□□□□ -2.15
TOPBP1-205ENST00000506779 RPL35P42766 123 aaKnown RBP1.62□□□□□ -2.15
TOPBP1-205ENST00000506779 ATP5G3P48201 142 aa1.62□□□□□ -2.15
TOPBP1-205ENST00000506779 CMC4P56277 68 aaPredicted RBP1.62□□□□□ -2.15
TOPBP1-205ENST00000506779 RAB5BP61020 215 aa1.62□□□□□ -2.15
TOPBP1-205ENST00000506779 RPL23P62829 140 aaKnown RBP1.62□□□□□ -2.15
TOPBP1-205ENST00000506779 FLI1Q01543 452 aaPredicted RBP1.62□□□□□ -2.15
TOPBP1-205ENST00000506779 ADIRFQ15847 76 aa1.62□□□□□ -2.15
TOPBP1-205ENST00000506779 TMEM183BQ1AE95 376 aa1.62□□□□□ -2.15
TOPBP1-205ENST00000506779 RPEL1Q2QD12 228 aa1.62□□□□□ -2.15
TOPBP1-205ENST00000506779 NSUN5P1Q3KNT7 163 aa1.62□□□□□ -2.15
TOPBP1-205ENST00000506779 GCSAMLQ5JQS6 135 aa1.62□□□□□ -2.15
TOPBP1-205ENST00000506779 IBA57Q5T440 356 aaKnown RBP1.62□□□□□ -2.15
TOPBP1-205ENST00000506779 Q6AWC8 147 aa1.62□□□□□ -2.15
TOPBP1-205ENST00000506779 TOMM20LQ6UXN7 152 aa1.62□□□□□ -2.15
TOPBP1-205ENST00000506779 PATE2Q6UY27 113 aa1.62□□□□□ -2.15
TOPBP1-205ENST00000506779 SSX7Q7RTT5 188 aa1.62□□□□□ -2.15
TOPBP1-205ENST00000506779 LINC01551Q86U37 167 aa1.62□□□□□ -2.15
TOPBP1-205ENST00000506779 BAGE2Q86Y30 109 aa1.62□□□□□ -2.15
TOPBP1-205ENST00000506779 Q8N2B8 174 aa1.62□□□□□ -2.15
TOPBP1-205ENST00000506779 C6orf223Q8N319 242 aa1.62□□□□□ -2.15
TOPBP1-205ENST00000506779 TMEM75Q8N9X5 138 aa1.62□□□□□ -2.15
TOPBP1-205ENST00000506779 WFDC11Q8NEX6 87 aa1.62□□□□□ -2.15
TOPBP1-205ENST00000506779 BLNKQ8WV28 456 aa1.62□□□□□ -2.15
TOPBP1-205ENST00000506779 BORCS7Q96B45 105 aa1.62□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms