RNA–Protein interactions for RNA: ENST00000505705.1

LIMCH1-206, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 3

Gene LIMCH1, Length 437 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-206ENST00000505705 SMIM7Q9BQ49 75 aa5.92□□□□□ -1.46
LIMCH1-206ENST00000505705 C11orf68Q9H3H3 251 aaKnown RBP5.92□□□□□ -1.46
LIMCH1-206ENST00000505705 TP53TG3Q9ULZ0 132 aa5.92□□□□□ -1.46
LIMCH1-206ENST00000505705 TIMM8BQ9Y5J9 83 aaPredicted RBP5.92□□□□□ -1.46
LIMCH1-206ENST00000505705 PGPEP1LA6NFU8 196 aa5.91□□□□□ -1.46
LIMCH1-206ENST00000505705 B4DEV8 164 aa5.91□□□□□ -1.46
LIMCH1-206ENST00000505705 M0R036 132 aa5.91□□□□□ -1.46
LIMCH1-206ENST00000505705 GNRH2O43555 120 aa5.91□□□□□ -1.46
LIMCH1-206ENST00000505705 SH2D1AO60880 128 aa5.91□□□□□ -1.46
LIMCH1-206ENST00000505705 NDUFS6O75380 124 aaKnown RBP5.91□□□□□ -1.46
LIMCH1-206ENST00000505705 ZNF415Q09FC8 603 aa5.91□□□□□ -1.46
LIMCH1-206ENST00000505705 FAM222AQ5U5X8 452 aa5.91□□□□□ -1.46
LIMCH1-206ENST00000505705 C11orf45Q8TAV5 145 aa5.91□□□□□ -1.46
LIMCH1-206ENST00000505705 SMIM12Q96EX1 92 aa5.91□□□□□ -1.46
LIMCH1-206ENST00000505705 LINC00467Q9BRT7 94 aa5.91□□□□□ -1.46
LIMCH1-206ENST00000505705 NOP10Q9NPE3 64 aaKnown RBP5.91□□□□□ -1.46
LIMCH1-206ENST00000505705 GSN-AS1Q9NRJ2 163 aa5.91□□□□□ -1.46
LIMCH1-206ENST00000505705 TMSB15BA0A087X1C1 80 aa5.9□□□□□ -1.46
LIMCH1-206ENST00000505705 TEX48A0A1B0GUV7 120 aa5.9□□□□□ -1.46
LIMCH1-206ENST00000505705 C9JCJ5 164 aa5.9□□□□□ -1.46
LIMCH1-206ENST00000505705 TYMSP04818 313 aa5.9□□□□□ -1.46
LIMCH1-206ENST00000505705 CRIP1P50238 77 aa5.9□□□□□ -1.46
LIMCH1-206ENST00000505705 TMEM241Q24JQ0 296 aa5.9□□□□□ -1.46
LIMCH1-206ENST00000505705 FAM74A3Q4VXF1 159 aa5.9□□□□□ -1.46
LIMCH1-206ENST00000505705 SOHLH1Q5JUK2 328 aa5.9□□□□□ -1.46
LIMCH1-206ENST00000505705 COX8CQ7Z4L0 72 aa5.9□□□□□ -1.46
LIMCH1-206ENST00000505705 COMMD7Q86VX2 200 aa5.9□□□□□ -1.46
LIMCH1-206ENST00000505705 IL17DQ8TAD2 202 aa5.9□□□□□ -1.46
LIMCH1-206ENST00000505705 OCC1Q8TAD7 63 aa5.9□□□□□ -1.46
LIMCH1-206ENST00000505705 RNASE8Q8TDE3 154 aaKnown RBP5.9□□□□□ -1.46
LIMCH1-206ENST00000505705 WWC2-AS2Q96NR7 200 aa5.9□□□□□ -1.46
LIMCH1-206ENST00000505705 MLST8Q9BVC4 326 aa5.9□□□□□ -1.46
LIMCH1-206ENST00000505705 TRBV20OR9-2A0A075B6H5 130 aa5.89□□□□□ -1.47
LIMCH1-206ENST00000505705 TRGV1A0A0A0MS02 117 aa5.89□□□□□ -1.47
LIMCH1-206ENST00000505705 IGKV3D-20A0A0C4DH25 116 aa5.89□□□□□ -1.47
LIMCH1-206ENST00000505705 GRIFINA4D1Z8 144 aa5.89□□□□□ -1.47
LIMCH1-206ENST00000505705 LYRM9A8MSI8 78 aa5.89□□□□□ -1.47
LIMCH1-206ENST00000505705 C9JQL5 133 aa5.89□□□□□ -1.47
LIMCH1-206ENST00000505705 IGLV2-8P01709 118 aa5.89□□□□□ -1.47
LIMCH1-206ENST00000505705 P01737 135 aa5.89□□□□□ -1.47
LIMCH1-206ENST00000505705 SFTA3P0C7M3 94 aa5.89□□□□□ -1.47
LIMCH1-206ENST00000505705 DEFB130BP0DP73 79 aa5.89□□□□□ -1.47
LIMCH1-206ENST00000505705 DEFB130AP0DP74 79 aa5.89□□□□□ -1.47
LIMCH1-206ENST00000505705 ASIPP42127 132 aa5.89□□□□□ -1.47
LIMCH1-206ENST00000505705 NANOS2P60321 138 aaKnown RBP5.89□□□□□ -1.47
LIMCH1-206ENST00000505705 DAD1P61803 113 aa5.89□□□□□ -1.47
LIMCH1-206ENST00000505705 TDRG1Q3Y452 100 aa5.89□□□□□ -1.47
LIMCH1-206ENST00000505705 IBA57Q5T440 356 aaKnown RBP5.89□□□□□ -1.47
LIMCH1-206ENST00000505705 UQCC3Q6UW78 93 aa5.89□□□□□ -1.47
LIMCH1-206ENST00000505705 EDA2RQ9HAV5 297 aa5.89□□□□□ -1.47
LIMCH1-206ENST00000505705 MDFICQ9P1T7 246 aa5.89□□□□□ -1.47
LIMCH1-206ENST00000505705 C11orf21Q9P2W6 132 aa5.89□□□□□ -1.47
LIMCH1-206ENST00000505705 DKK2Q9UBU2 259 aa5.89□□□□□ -1.47
LIMCH1-206ENST00000505705 NAT8Q9UHE5 227 aa5.89□□□□□ -1.47
LIMCH1-206ENST00000505705 CELA1Q9UNI1 258 aa5.89□□□□□ -1.47
LIMCH1-206ENST00000505705 PRKDCP78527 4128 aaKnown RBP5.89□□□□□ -1.47
LIMCH1-206ENST00000505705 DNAH9Q9NYC9 4486 aa5.88□□□□□ -1.47
LIMCH1-206ENST00000505705 TRGV2A0A075B6R0 118 aa5.88□□□□□ -1.47
LIMCH1-206ENST00000505705 IGHV3-16A0A0C4DH30 117 aa5.88□□□□□ -1.47
LIMCH1-206ENST00000505705 GAGE12BA1L429 117 aa5.88□□□□□ -1.47
LIMCH1-206ENST00000505705 XKRY2A2RUG3 117 aa5.88□□□□□ -1.47
LIMCH1-206ENST00000505705 KRBOX1C9JBD0 128 aa5.88□□□□□ -1.47
LIMCH1-206ENST00000505705 GAGE7O76087 117 aa5.88□□□□□ -1.47
LIMCH1-206ENST00000505705 GAGE12FP0CL80 117 aa5.88□□□□□ -1.47
LIMCH1-206ENST00000505705 GAGE12GP0CL81 117 aa5.88□□□□□ -1.47
LIMCH1-206ENST00000505705 GAGE12IP0CL82 117 aa5.88□□□□□ -1.47
LIMCH1-206ENST00000505705 TCL1AP56279 114 aa5.88□□□□□ -1.47
LIMCH1-206ENST00000505705 ERVFC1-1P60608 527 aa5.88□□□□□ -1.47
LIMCH1-206ENST00000505705 ADIRFQ15847 76 aa5.88□□□□□ -1.47
LIMCH1-206ENST00000505705 C11orf72Q8NBR9 251 aa5.88□□□□□ -1.47
LIMCH1-206ENST00000505705 OR2D3Q8NGH3 330 aa5.88□□□□□ -1.47
LIMCH1-206ENST00000505705 SPXQ9BT56 116 aa5.88□□□□□ -1.47
LIMCH1-206ENST00000505705 RNASE7Q9H1E1 156 aaKnown RBP5.88□□□□□ -1.47
LIMCH1-206ENST00000505705 LY96Q9Y6Y9 160 aa5.88□□□□□ -1.47
LIMCH1-206ENST00000505705 HUWE1Q7Z6Z7 4374 aaKnown RBP5.87□□□□□ -1.47
LIMCH1-206ENST00000505705 PLAC8L1A1L4L8 177 aa5.87□□□□□ -1.47
LIMCH1-206ENST00000505705 LINC00862A6NCI5 91 aa5.87□□□□□ -1.47
LIMCH1-206ENST00000505705 K7EN84 100 aa5.87□□□□□ -1.47
LIMCH1-206ENST00000505705 GATCO43716 136 aaKnown RBP5.87□□□□□ -1.47
LIMCH1-206ENST00000505705 HTN3P15516 51 aa5.87□□□□□ -1.47
LIMCH1-206ENST00000505705 RPS20P60866 119 aaKnown RBP5.87□□□□□ -1.47
LIMCH1-206ENST00000505705 RPL19P84098 196 aaKnown RBP5.87□□□□□ -1.47
LIMCH1-206ENST00000505705 DAZ2Q13117 558 aaKnown RBP5.87□□□□□ -1.47
LIMCH1-206ENST00000505705 LINC01551Q86U37 167 aa5.87□□□□□ -1.47
LIMCH1-206ENST00000505705 C15orf54Q8N8G6 183 aa5.87□□□□□ -1.47
LIMCH1-206ENST00000505705 NUDT10Q8NFP7 164 aa5.87□□□□□ -1.47
LIMCH1-206ENST00000505705 NUDT11Q96G61 164 aa5.87□□□□□ -1.47
LIMCH1-206ENST00000505705 TPPP3Q9BW30 176 aa5.87□□□□□ -1.47
LIMCH1-206ENST00000505705 MRPL16Q9NX20 251 aaKnown RBP5.87□□□□□ -1.47
LIMCH1-206ENST00000505705 C19orf71A6NCJ1 209 aa5.86□□□□□ -1.47
LIMCH1-206ENST00000505705 F8W036 122 aa5.86□□□□□ -1.47
LIMCH1-206ENST00000505705 H3BVH4 76 aa5.86□□□□□ -1.47
LIMCH1-206ENST00000505705 M0R2P5 195 aa5.86□□□□□ -1.47
LIMCH1-206ENST00000505705 SPINK4O60575 86 aa5.86□□□□□ -1.47
LIMCH1-206ENST00000505705 ARMS2P0C7Q2 107 aa5.86□□□□□ -1.47
LIMCH1-206ENST00000505705 SSTP61278 116 aa5.86□□□□□ -1.47
LIMCH1-206ENST00000505705 RPL23P62829 140 aaKnown RBP5.86□□□□□ -1.47
LIMCH1-206ENST00000505705 C12orf74Q32Q52 190 aa5.86□□□□□ -1.47
LIMCH1-206ENST00000505705 ZFAND6Q6FIF0 208 aa5.86□□□□□ -1.47
LIMCH1-206ENST00000505705 Q6ZTC4 211 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms