RNA–Protein interactions for RNA: ENST00000504380.1

PDLIM7-212, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-212ENST00000504380 OCC1Q8TAD7 63 aa9.49□□□□□ -0.89
PDLIM7-212ENST00000504380 TMEM263Q8WUH6 116 aaKnown RBP9.49□□□□□ -0.89
PDLIM7-212ENST00000504380 C16orf74Q96GX8 76 aa9.49□□□□□ -0.89
PDLIM7-212ENST00000504380 WWC2-AS2Q96NR7 200 aa9.49□□□□□ -0.89
PDLIM7-212ENST00000504380 NOP10Q9NPE3 64 aaKnown RBP9.49□□□□□ -0.89
PDLIM7-212ENST00000504380 MDFICQ9P1T7 246 aa9.49□□□□□ -0.89
PDLIM7-212ENST00000504380 TMSB15BA0A087X1C1 80 aa9.48□□□□□ -0.89
PDLIM7-212ENST00000504380 IGKV3D-20A0A0C4DH25 116 aa9.48□□□□□ -0.89
PDLIM7-212ENST00000504380 CXorf65A6NEN9 183 aa9.48□□□□□ -0.89
PDLIM7-212ENST00000504380 ORM1P02763 201 aa9.48□□□□□ -0.89
PDLIM7-212ENST00000504380 TYMSP04818 313 aa9.48□□□□□ -0.89
PDLIM7-212ENST00000504380 IL17DQ8TAD2 202 aa9.48□□□□□ -0.89
PDLIM7-212ENST00000504380 SMIM7Q9BQ49 75 aa9.48□□□□□ -0.89
PDLIM7-212ENST00000504380 GRIFINA4D1Z8 144 aa9.47□□□□□ -0.89
PDLIM7-212ENST00000504380 TMEM189A5PLL7 270 aa9.47□□□□□ -0.89
PDLIM7-212ENST00000504380 ZNF727A8MUV8 499 aa9.47□□□□□ -0.89
PDLIM7-212ENST00000504380 K7EN84 100 aa9.47□□□□□ -0.89
PDLIM7-212ENST00000504380 RPL19P84098 196 aaKnown RBP9.47□□□□□ -0.89
PDLIM7-212ENST00000504380 ZNF493Q6ZR52 646 aa9.47□□□□□ -0.89
PDLIM7-212ENST00000504380 C11orf45Q8TAV5 145 aa9.47□□□□□ -0.89
PDLIM7-212ENST00000504380 SDF2L1Q9HCN8 221 aa9.47□□□□□ -0.89
PDLIM7-212ENST00000504380 DKK2Q9UBU2 259 aa9.47□□□□□ -0.89
PDLIM7-212ENST00000504380 TIMM8BQ9Y5J9 83 aaPredicted RBP9.47□□□□□ -0.89
PDLIM7-212ENST00000504380 STAB2Q8WWQ8 2551 aa9.46□□□□□ -0.89
PDLIM7-212ENST00000504380 IGHV3-16A0A0C4DH30 117 aa9.46□□□□□ -0.9
PDLIM7-212ENST00000504380 SNURFLB1AK76 121 aa9.46□□□□□ -0.9
PDLIM7-212ENST00000504380 B4DEV8 164 aa9.46□□□□□ -0.9
PDLIM7-212ENST00000504380 KRBOX1C9JBD0 128 aa9.46□□□□□ -0.9
PDLIM7-212ENST00000504380 C9JCJ5 164 aa9.46□□□□□ -0.9
PDLIM7-212ENST00000504380 NDUFS6O75380 124 aaKnown RBP9.46□□□□□ -0.9
PDLIM7-212ENST00000504380 C12orf74Q32Q52 190 aa9.46□□□□□ -0.9
PDLIM7-212ENST00000504380 TDRG1Q3Y452 100 aa9.46□□□□□ -0.9
PDLIM7-212ENST00000504380 ZNF575Q86XF7 245 aa9.46□□□□□ -0.9
PDLIM7-212ENST00000504380 EPPK1P58107 5090 aaKnown RBP9.46□□□□□ -0.9
PDLIM7-212ENST00000504380 TRGV11A0A075B6L2 103 aa9.45□□□□□ -0.9
PDLIM7-212ENST00000504380 SPART-AS1P0CW21 52 aa9.45□□□□□ -0.9
PDLIM7-212ENST00000504380 DEFB130BP0DP73 79 aa9.45□□□□□ -0.9
PDLIM7-212ENST00000504380 DEFB130AP0DP74 79 aa9.45□□□□□ -0.9
PDLIM7-212ENST00000504380 TCL1AP56279 114 aa9.45□□□□□ -0.9
PDLIM7-212ENST00000504380 ZNF415Q09FC8 603 aa9.45□□□□□ -0.9
PDLIM7-212ENST00000504380 ZFAND6Q6FIF0 208 aa9.45□□□□□ -0.9
PDLIM7-212ENST00000504380 COMMD7Q86VX2 200 aa9.45□□□□□ -0.9
PDLIM7-212ENST00000504380 KCNS1Q96KK3 526 aa9.45□□□□□ -0.9
PDLIM7-212ENST00000504380 MRPL16Q9NX20 251 aaKnown RBP9.45□□□□□ -0.9
PDLIM7-212ENST00000504380 GAGE12BA1L429 117 aa9.44□□□□□ -0.9
PDLIM7-212ENST00000504380 GAGE7O76087 117 aa9.44□□□□□ -0.9
PDLIM7-212ENST00000504380 GAGE12FP0CL80 117 aa9.44□□□□□ -0.9
PDLIM7-212ENST00000504380 GAGE12GP0CL81 117 aa9.44□□□□□ -0.9
PDLIM7-212ENST00000504380 GAGE12IP0CL82 117 aa9.44□□□□□ -0.9
PDLIM7-212ENST00000504380 IBA57Q5T440 356 aaKnown RBP9.44□□□□□ -0.9
PDLIM7-212ENST00000504380 Q6ZTI0 123 aa9.44□□□□□ -0.9
PDLIM7-212ENST00000504380 RNASE7Q9H1E1 156 aaKnown RBP9.44□□□□□ -0.9
PDLIM7-212ENST00000504380 SMDT1Q9H4I9 107 aa9.44□□□□□ -0.9
PDLIM7-212ENST00000504380 TRGV1A0A0A0MS02 117 aa9.43□□□□□ -0.9
PDLIM7-212ENST00000504380 LINC00862A6NCI5 91 aa9.43□□□□□ -0.9
PDLIM7-212ENST00000504380 C19orf71A6NCJ1 209 aa9.43□□□□□ -0.9
PDLIM7-212ENST00000504380 SFTA3P0C7M3 94 aa9.43□□□□□ -0.9
PDLIM7-212ENST00000504380 GZMBP10144 247 aa9.43□□□□□ -0.9
PDLIM7-212ENST00000504380 RNASE3P12724 160 aaKnown RBP9.43□□□□□ -0.9
PDLIM7-212ENST00000504380 DAD1P61803 113 aa9.43□□□□□ -0.9
PDLIM7-212ENST00000504380 TMEM241Q24JQ0 296 aa9.43□□□□□ -0.9
PDLIM7-212ENST00000504380 LINC01559Q495D7 138 aa9.43□□□□□ -0.9
PDLIM7-212ENST00000504380 SOHLH1Q5JUK2 328 aa9.43□□□□□ -0.9
PDLIM7-212ENST00000504380 Q6ZTC4 211 aa9.43□□□□□ -0.9
PDLIM7-212ENST00000504380 NUDT10Q8NFP7 164 aa9.43□□□□□ -0.9
PDLIM7-212ENST00000504380 DAZAP1Q96EP5 407 aaKnown RBP9.43□□□□□ -0.9
PDLIM7-212ENST00000504380 SMIM12Q96EX1 92 aa9.43□□□□□ -0.9
PDLIM7-212ENST00000504380 NUDT11Q96G61 164 aa9.43□□□□□ -0.9
PDLIM7-212ENST00000504380 KRTAP17-1Q9BYP8 105 aa9.43□□□□□ -0.9
PDLIM7-212ENST00000504380 LYRM9A8MSI8 78 aa9.42□□□□□ -0.9
PDLIM7-212ENST00000504380 H3BVH4 76 aa9.42□□□□□ -0.9
PDLIM7-212ENST00000504380 SPINK4O60575 86 aa9.42□□□□□ -0.9
PDLIM7-212ENST00000504380 HTN3P15516 51 aa9.42□□□□□ -0.9
PDLIM7-212ENST00000504380 S100A4P26447 101 aaKnown RBP9.42□□□□□ -0.9
PDLIM7-212ENST00000504380 ASIPP42127 132 aa9.42□□□□□ -0.9
PDLIM7-212ENST00000504380 DAZ2Q13117 558 aaKnown RBP9.42□□□□□ -0.9
PDLIM7-212ENST00000504380 LINC01551Q86U37 167 aa9.42□□□□□ -0.9
PDLIM7-212ENST00000504380 OR2D3Q8NGH3 330 aa9.42□□□□□ -0.9
PDLIM7-212ENST00000504380 MUC7Q8TAX7 377 aa9.42□□□□□ -0.9
PDLIM7-212ENST00000504380 P01737 135 aa9.41□□□□□ -0.9
PDLIM7-212ENST00000504380 ARMS2P0C7Q2 107 aa9.41□□□□□ -0.9
PDLIM7-212ENST00000504380 RPL23P62829 140 aaKnown RBP9.41□□□□□ -0.9
PDLIM7-212ENST00000504380 FAM74A3Q4VXF1 159 aa9.41□□□□□ -0.9
PDLIM7-212ENST00000504380 C9orf85Q96MD7 179 aa9.41□□□□□ -0.9
PDLIM7-212ENST00000504380 NAT8Q9UHE5 227 aa9.41□□□□□ -0.9
PDLIM7-212ENST00000504380 MUC4Q99102 2169 aa9.4□□□□□ -0.9
PDLIM7-212ENST00000504380 MUC21A0A0G2JKD1 596 aa9.4□□□□□ -0.9
PDLIM7-212ENST00000504380 MUC21A0A140T8X8 626 aa9.4□□□□□ -0.9
PDLIM7-212ENST00000504380 IGHV3-53P01767 116 aa9.4□□□□□ -0.9
PDLIM7-212ENST00000504380 ADIRFQ15847 76 aa9.4□□□□□ -0.9
PDLIM7-212ENST00000504380 LINC00612Q8N6U2 182 aa9.4□□□□□ -0.9
PDLIM7-212ENST00000504380 PHLDA1Q8WV24 401 aaPredicted RBP9.4□□□□□ -0.9
PDLIM7-212ENST00000504380 SPXQ9BT56 116 aa9.4□□□□□ -0.9
PDLIM7-212ENST00000504380 BIN3Q9NQY0 253 aa9.4□□□□□ -0.9
PDLIM7-212ENST00000504380 LY96Q9Y6Y9 160 aa9.4□□□□□ -0.9
PDLIM7-212ENST00000504380 RYR2Q92736 4967 aa9.4□□□□□ -0.91
PDLIM7-212ENST00000504380 TEX48A0A1B0GUV7 120 aa9.39□□□□□ -0.91
PDLIM7-212ENST00000504380 M0R2P5 195 aa9.39□□□□□ -0.91
PDLIM7-212ENST00000504380 SSTP61278 116 aa9.39□□□□□ -0.91
PDLIM7-212ENST00000504380 UQCC3Q6UW78 93 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 968.7 ms