RNA–Protein interactions for RNA: ENST00000504220.6

PCDH11X-208, Transcript of protocadherin 11 X-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11X, Length 4,017 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-208ENST00000504220 LINC01600Q96MT4 127 aa2.91□□□□□ -1.94
PCDH11X-208ENST00000504220 UPK3BQ9BT76 320 aa2.91□□□□□ -1.94
PCDH11X-208ENST00000504220 OSTCQ9NRP0 149 aa2.91□□□□□ -1.94
PCDH11X-208ENST00000504220 AGRNO00468 2067 aa2.91□□□□□ -1.94
PCDH11X-208ENST00000504220 F8W1H4 67 aa2.91□□□□□ -1.94
PCDH11X-208ENST00000504220 ATP5LO75964 103 aa2.91□□□□□ -1.94
PCDH11X-208ENST00000504220 HBDP02042 147 aa2.91□□□□□ -1.94
PCDH11X-208ENST00000504220 ASIPP42127 132 aa2.91□□□□□ -1.94
PCDH11X-208ENST00000504220 GDF5OSQ5U4N7 250 aa2.91□□□□□ -1.94
PCDH11X-208ENST00000504220 CRIP3Q6Q6R5 217 aa2.91□□□□□ -1.94
PCDH11X-208ENST00000504220 HRCT1Q6UXD1 115 aa2.91□□□□□ -1.94
PCDH11X-208ENST00000504220 PPP1R27Q86WC6 154 aa2.91□□□□□ -1.94
PCDH11X-208ENST00000504220 AMN1Q8IY45 258 aa2.91□□□□□ -1.94
PCDH11X-208ENST00000504220 TEX29Q8N6K0 151 aa2.91□□□□□ -1.94
PCDH11X-208ENST00000504220 LIME1Q9H400 295 aa2.91□□□□□ -1.94
PCDH11X-208ENST00000504220 PRO0628Q9UI54 55 aa2.91□□□□□ -1.94
PCDH11X-208ENST00000504220 USP24Q9UPU5 2620 aa2.91□□□□□ -1.94
PCDH11X-208ENST00000504220 HHLA3Q9XRX5 114 aa2.91□□□□□ -1.94
PCDH11X-208ENST00000504220 TMEM89A2RUT3 159 aa2.9□□□□□ -1.94
PCDH11X-208ENST00000504220 C15orf61A6NNL5 157 aa2.9□□□□□ -1.94
PCDH11X-208ENST00000504220 TIMM23O14925 209 aa2.9□□□□□ -1.94
PCDH11X-208ENST00000504220 QRFPP83859 136 aa2.9□□□□□ -1.94
PCDH11X-208ENST00000504220 GAGE13Q4V321 117 aa2.9□□□□□ -1.94
PCDH11X-208ENST00000504220 TMEM155Q4W5P6 130 aa2.9□□□□□ -1.94
PCDH11X-208ENST00000504220 C6orf226Q5I0X4 101 aa2.9□□□□□ -1.94
PCDH11X-208ENST00000504220 LYZL1Q6UWQ5 148 aa2.9□□□□□ -1.94
PCDH11X-208ENST00000504220 ZNF497Q6ZNH5 498 aa2.9□□□□□ -1.94
PCDH11X-208ENST00000504220 NUP35Q8NFH5 326 aa2.9□□□□□ -1.94
PCDH11X-208ENST00000504220 MGST2Q99735 147 aa2.9□□□□□ -1.94
PCDH11X-208ENST00000504220 TMEM126AQ9H061 195 aa2.9□□□□□ -1.94
PCDH11X-208ENST00000504220 HOXA3O43365 443 aaPredicted RBP2.9□□□□□ -1.94
PCDH11X-208ENST00000504220 SPRY2O43597 315 aa2.9□□□□□ -1.94
PCDH11X-208ENST00000504220 DPM2O94777 84 aa2.9□□□□□ -1.94
PCDH11X-208ENST00000504220 IGKV1-16P04430 117 aa2.9□□□□□ -1.94
PCDH11X-208ENST00000504220 LINC01620Q4KN68 170 aa2.9□□□□□ -1.94
PCDH11X-208ENST00000504220 C4orf48Q5BLP8 95 aa2.9□□□□□ -1.94
PCDH11X-208ENST00000504220 SDIM1Q6ZPB5 146 aa2.9□□□□□ -1.94
PCDH11X-208ENST00000504220 FAM90A1Q86YD7 464 aa2.9□□□□□ -1.94
PCDH11X-208ENST00000504220 Q8N7P7 452 aa2.9□□□□□ -1.94
PCDH11X-208ENST00000504220 SLC25A39Q9BZJ4 359 aaPredicted RBP2.9□□□□□ -1.94
PCDH11X-208ENST00000504220 DSPP15924 2871 aaKnown RBP2.9□□□□□ -1.95
PCDH11X-208ENST00000504220 IGHV3-53P01767 116 aa2.9□□□□□ -1.95
PCDH11X-208ENST00000504220 CCL1P22362 96 aa2.9□□□□□ -1.95
PCDH11X-208ENST00000504220 MSMPQ1L6U9 139 aa2.9□□□□□ -1.95
PCDH11X-208ENST00000504220 VWC2Q2TAL6 325 aa2.9□□□□□ -1.95
PCDH11X-208ENST00000504220 KRTAP21-3Q3LHN1 58 aa2.9□□□□□ -1.95
PCDH11X-208ENST00000504220 AMTNQ6UX39 209 aa2.9□□□□□ -1.95
PCDH11X-208ENST00000504220 IL17RELQ6ZVW7 336 aa2.9□□□□□ -1.95
PCDH11X-208ENST00000504220 ZNF329Q86UD4 541 aa2.9□□□□□ -1.95
PCDH11X-208ENST00000504220 GNB1LQ9BYB4 327 aa2.9□□□□□ -1.95
PCDH11X-208ENST00000504220 EDA2RQ9HAV5 297 aa2.9□□□□□ -1.95
PCDH11X-208ENST00000504220 ATRQ13535 2644 aa2.9□□□□□ -1.95
PCDH11X-208ENST00000504220 PRRC2AP48634 2157 aaKnown RBP2.9□□□□□ -1.95
PCDH11X-208ENST00000504220 TRGV2A0A075B6R0 118 aa2.9□□□□□ -1.95
PCDH11X-208ENST00000504220 IGKV1-6A0A0C4DH72 117 aa2.9□□□□□ -1.95
PCDH11X-208ENST00000504220 C17orf100A8MU93 164 aa2.9□□□□□ -1.95
PCDH11X-208ENST00000504220 K7EM74 188 aa2.9□□□□□ -1.95
PCDH11X-208ENST00000504220 K7EMI3 77 aa2.9□□□□□ -1.95
PCDH11X-208ENST00000504220 NPFFO15130 113 aa2.9□□□□□ -1.95
PCDH11X-208ENST00000504220 PRB1P04280 392 aa2.9□□□□□ -1.95
PCDH11X-208ENST00000504220 ARMS2P0C7Q2 107 aa2.9□□□□□ -1.95
PCDH11X-208ENST00000504220 ZNF688P0C7X2 276 aa2.9□□□□□ -1.95
PCDH11X-208ENST00000504220 CRYGSP22914 178 aa2.9□□□□□ -1.95
PCDH11X-208ENST00000504220 IFI27P40305 119 aaPredicted RBP2.9□□□□□ -1.95
PCDH11X-208ENST00000504220 GAGE2BQ13066 116 aa2.9□□□□□ -1.95
PCDH11X-208ENST00000504220 GAGE2EQ4V326 116 aa2.9□□□□□ -1.95
PCDH11X-208ENST00000504220 OR10J3Q5JRS4 329 aa2.9□□□□□ -1.95
PCDH11X-208ENST00000504220 ZFAND6Q6FIF0 208 aa2.9□□□□□ -1.95
PCDH11X-208ENST00000504220 C14orf178Q8N769 122 aaPredicted RBP2.9□□□□□ -1.95
PCDH11X-208ENST00000504220 NABP1Q96AH0 204 aa2.9□□□□□ -1.95
PCDH11X-208ENST00000504220 GAGE2DQ9UEU5 116 aa2.9□□□□□ -1.95
PCDH11X-208ENST00000504220 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP2.89□□□□□ -1.95
PCDH11X-208ENST00000504220 TCRBV4S1A1TA0A5B7 111 aa2.89□□□□□ -1.95
PCDH11X-208ENST00000504220 KNCNA6PVL3 124 aa2.89□□□□□ -1.95
PCDH11X-208ENST00000504220 C15orf62A8K5M9 175 aa2.89□□□□□ -1.95
PCDH11X-208ENST00000504220 A8MWV9 139 aa2.89□□□□□ -1.95
PCDH11X-208ENST00000504220 IGKCP01834 107 aa2.89□□□□□ -1.95
PCDH11X-208ENST00000504220 SNRPD3P62318 126 aaKnown RBP2.89□□□□□ -1.95
PCDH11X-208ENST00000504220 POU2AF1Q16633 256 aa2.89□□□□□ -1.95
PCDH11X-208ENST00000504220 CEMP1Q6PRD7 247 aaPredicted RBP2.89□□□□□ -1.95
PCDH11X-208ENST00000504220 ATP5L2Q7Z4Y8 100 aa2.89□□□□□ -1.95
PCDH11X-208ENST00000504220 IGFBPL1Q8WX77 278 aa2.89□□□□□ -1.95
PCDH11X-208ENST00000504220 EEF1AKMT3Q96AZ1 226 aa2.89□□□□□ -1.95
PCDH11X-208ENST00000504220 MS4A6AQ9H2W1 248 aa2.89□□□□□ -1.95
PCDH11X-208ENST00000504220 C7orf69Q9H7B7 122 aa2.89□□□□□ -1.95
PCDH11X-208ENST00000504220 A0A087WWL8 130 aa2.89□□□□□ -1.95
PCDH11X-208ENST00000504220 TRAV21A0A0B4J279 112 aa2.89□□□□□ -1.95
PCDH11X-208ENST00000504220 TRAV40A0A0B4J280 105 aa2.89□□□□□ -1.95
PCDH11X-208ENST00000504220 C19orf71A6NCJ1 209 aa2.89□□□□□ -1.95
PCDH11X-208ENST00000504220 SHISA9B4DS77 424 aa2.89□□□□□ -1.95
PCDH11X-208ENST00000504220 PAX8Q06710 450 aa2.89□□□□□ -1.95
PCDH11X-208ENST00000504220 Q0VFX4 171 aa2.89□□□□□ -1.95
PCDH11X-208ENST00000504220 ZNF876PQ49A33 203 aa2.89□□□□□ -1.95
PCDH11X-208ENST00000504220 CD177Q8N6Q3 437 aa2.89□□□□□ -1.95
PCDH11X-208ENST00000504220 ATP6V0E2Q8NHE4 81 aa2.89□□□□□ -1.95
PCDH11X-208ENST00000504220 PIFOQ8TCI5 191 aa2.89□□□□□ -1.95
PCDH11X-208ENST00000504220 TMEM158Q8WZ71 300 aa2.89□□□□□ -1.95
PCDH11X-208ENST00000504220 FMC1Q96HJ9 113 aa2.89□□□□□ -1.95
PCDH11X-208ENST00000504220 IQCF6A8MYZ5 107 aa2.89□□□□□ -1.95
PCDH11X-208ENST00000504220 COX8AP10176 69 aa2.89□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms