RNA–Protein interactions for RNA: ENST00000503427.5

HMGXB3-202, Transcript of HMG-box containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HMGXB3, Length 5,275 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-202ENST00000503427 UBE2WQ96B02 151 aa12.72□□□□□ -0.37
HMGXB3-202ENST00000503427 MRPL53Q96EL3 112 aaKnown RBP12.71□□□□□ -0.37
HMGXB3-202ENST00000503427 RBAKDNA6NC62 111 aa12.71□□□□□ -0.37
HMGXB3-202ENST00000503427 GAGE12JA6NER3 117 aa12.71□□□□□ -0.37
HMGXB3-202ENST00000503427 ADORA2A-AS1P86434 159 aa12.71□□□□□ -0.37
HMGXB3-202ENST00000503427 GAGE4Q13068 117 aa12.71□□□□□ -0.37
HMGXB3-202ENST00000503427 GAGE5Q13069 117 aa12.71□□□□□ -0.37
HMGXB3-202ENST00000503427 TCTEX1D4Q5JR98 221 aa12.71□□□□□ -0.37
HMGXB3-202ENST00000503427 GAGE2AQ6NT46 116 aa12.71□□□□□ -0.37
HMGXB3-202ENST00000503427 EP400Q96L91 3159 aa12.71□□□□□ -0.38
HMGXB3-202ENST00000503427 TRBV25-1A0A075B6N4 114 aa12.71□□□□□ -0.38
HMGXB3-202ENST00000503427 SPRNQ5BIV9 151 aa12.71□□□□□ -0.38
HMGXB3-202ENST00000503427 CDPF1Q6NVV7 123 aa12.71□□□□□ -0.38
HMGXB3-202ENST00000503427 LENEPQ9Y5L5 61 aa12.7□□□□□ -0.38
HMGXB3-202ENST00000503427 MED13Q9UHV7 2174 aa12.7□□□□□ -0.38
HMGXB3-202ENST00000503427 INAFM2P0DMQ5 153 aa12.7□□□□□ -0.38
HMGXB3-202ENST00000503427 EGR2P11161 476 aaPredicted RBP12.7□□□□□ -0.38
HMGXB3-202ENST00000503427 DKK2Q9UBU2 259 aa12.7□□□□□ -0.38
HMGXB3-202ENST00000503427 PRO1854Q9UHT4 67 aa12.7□□□□□ -0.38
HMGXB3-202ENST00000503427 K7EMI3 77 aa12.7□□□□□ -0.38
HMGXB3-202ENST00000503427 MAJINQ3KP22 176 aa12.7□□□□□ -0.38
HMGXB3-202ENST00000503427 C3orf56Q8N813 242 aa12.7□□□□□ -0.38
HMGXB3-202ENST00000503427 SPANXA1Q9NS26 97 aa12.7□□□□□ -0.38
HMGXB3-202ENST00000503427 NDUFA12Q9UI09 145 aa12.7□□□□□ -0.38
HMGXB3-202ENST00000503427 TRAV12-2A0A075B6T6 113 aa12.7□□□□□ -0.38
HMGXB3-202ENST00000503427 FBXL19-AS1Q494R0 122 aa12.69□□□□□ -0.38
HMGXB3-202ENST00000503427 DYNAPQ8N1N2 210 aa12.69□□□□□ -0.38
HMGXB3-202ENST00000503427 AZU1P20160 251 aa12.69□□□□□ -0.38
HMGXB3-202ENST00000503427 ADAMTS9Q9P2N4 1935 aa12.69□□□□□ -0.38
HMGXB3-202ENST00000503427 IGHV3-16A0A0C4DH30 117 aa12.69□□□□□ -0.38
HMGXB3-202ENST00000503427 ZNF493Q6ZR52 646 aa12.69□□□□□ -0.38
HMGXB3-202ENST00000503427 AGPAT4-IT1Q9H0P7 198 aa12.69□□□□□ -0.38
HMGXB3-202ENST00000503427 DAZAP2Q15038 168 aaPredicted RBP12.69□□□□□ -0.38
HMGXB3-202ENST00000503427 TSSC4Q9Y5U2 329 aaPredicted RBP12.69□□□□□ -0.38
HMGXB3-202ENST00000503427 COL4A4P53420 1690 aaPredicted RBP12.68□□□□□ -0.38
HMGXB3-202ENST00000503427 J3QQQ9 107 aa12.68□□□□□ -0.38
HMGXB3-202ENST00000503427 FGF6P10767 208 aa12.68□□□□□ -0.38
HMGXB3-202ENST00000503427 GP9P14770 177 aa12.68□□□□□ -0.38
HMGXB3-202ENST00000503427 BOD1L2Q8IYS8 172 aa12.68□□□□□ -0.38
HMGXB3-202ENST00000503427 ZNRF2Q8NHG8 242 aa12.68□□□□□ -0.38
HMGXB3-202ENST00000503427 VPREB3Q9UKI3 123 aa12.68□□□□□ -0.38
HMGXB3-202ENST00000503427 HLA-DMBP28068 263 aa12.67□□□□□ -0.38
HMGXB3-202ENST00000503427 TMEM131Q92545 1883 aa12.67□□□□□ -0.38
HMGXB3-202ENST00000503427 ATP6V0BQ99437 205 aa12.67□□□□□ -0.38
HMGXB3-202ENST00000503427 CENPVL3A0A0U1RRI6 287 aa12.67□□□□□ -0.38
HMGXB3-202ENST00000503427 PTPN13Q12923 2485 aa12.67□□□□□ -0.38
HMGXB3-202ENST00000503427 TMEM243Q9BU79 118 aa12.67□□□□□ -0.38
HMGXB3-202ENST00000503427 IGHV4-61A0A0C4DH41 118 aa12.66□□□□□ -0.38
HMGXB3-202ENST00000503427 VWC2LB2RUY7 222 aa12.66□□□□□ -0.38
HMGXB3-202ENST00000503427 I3L2K1 104 aa12.66□□□□□ -0.38
HMGXB3-202ENST00000503427 DEFB113Q30KQ7 82 aa12.66□□□□□ -0.38
HMGXB3-202ENST00000503427 NPBQ8NG41 125 aa12.66□□□□□ -0.38
HMGXB3-202ENST00000503427 CFHR4Q92496 578 aa12.66□□□□□ -0.38
HMGXB3-202ENST00000503427 DEFB112Q30KQ8 113 aa12.65□□□□□ -0.38
HMGXB3-202ENST00000503427 IGF2BP2-AS1Q96M15 143 aa12.65□□□□□ -0.38
HMGXB3-202ENST00000503427 ANKHD1Q8IWZ3 2542 aaKnown RBP12.65□□□□□ -0.38
HMGXB3-202ENST00000503427 PATE2Q6UY27 113 aa12.65□□□□□ -0.38
HMGXB3-202ENST00000503427 SOCS3O14543 225 aa12.65□□□□□ -0.39
HMGXB3-202ENST00000503427 EDA2RQ9HAV5 297 aa12.65□□□□□ -0.39
HMGXB3-202ENST00000503427 INS-IGF2F8WCM5 200 aa12.64□□□□□ -0.39
HMGXB3-202ENST00000503427 C12orf74Q32Q52 190 aa12.64□□□□□ -0.39
HMGXB3-202ENST00000503427 Q8NA96 180 aa12.64□□□□□ -0.39
HMGXB3-202ENST00000503427 PRSS29PA6NIE9 313 aa12.64□□□□□ -0.39
HMGXB3-202ENST00000503427 NUPR1O60356 82 aa12.64□□□□□ -0.39
HMGXB3-202ENST00000503427 ZNF48Q96MX3 618 aaPredicted RBP12.64□□□□□ -0.39
HMGXB3-202ENST00000503427 KIAA1549LQ6ZVL6 1849 aa12.64□□□□□ -0.39
HMGXB3-202ENST00000503427 K7EIM0 57 aa12.64□□□□□ -0.39
HMGXB3-202ENST00000503427 K7ERJ3 54 aa12.64□□□□□ -0.39
HMGXB3-202ENST00000503427 IGKV1-17P01599 117 aa12.64□□□□□ -0.39
HMGXB3-202ENST00000503427 DEFB125Q8N687 156 aa12.64□□□□□ -0.39
HMGXB3-202ENST00000503427 IGHV3-38A0A0C4DH36 116 aa12.64□□□□□ -0.39
HMGXB3-202ENST00000503427 H3BMG7 143 aa12.64□□□□□ -0.39
HMGXB3-202ENST00000503427 RHOHQ15669 191 aa12.64□□□□□ -0.39
HMGXB3-202ENST00000503427 FOXE3Q13461 319 aa12.63□□□□□ -0.39
HMGXB3-202ENST00000503427 C10orf105Q8TEF2 133 aa12.63□□□□□ -0.39
HMGXB3-202ENST00000503427 HERVK_113P63121 156 aa12.63□□□□□ -0.39
HMGXB3-202ENST00000503427 MORN5Q5VZ52 161 aa12.63□□□□□ -0.39
HMGXB3-202ENST00000503427 CFHR3Q02985 330 aa12.63□□□□□ -0.39
HMGXB3-202ENST00000503427 PLCE1Q9P212 2302 aa12.63□□□□□ -0.39
HMGXB3-202ENST00000503427 EML6Q6ZMW3 1958 aa12.63□□□□□ -0.39
HMGXB3-202ENST00000503427 IGHV4-30-2A0A087WSY4 118 aa12.62□□□□□ -0.39
HMGXB3-202ENST00000503427 IGHV4-59P01825 116 aa12.62□□□□□ -0.39
HMGXB3-202ENST00000503427 PFN2P35080 140 aa12.62□□□□□ -0.39
HMGXB3-202ENST00000503427 FOXI2Q6ZQN5 318 aa12.62□□□□□ -0.39
HMGXB3-202ENST00000503427 FAM167A-AS1Q96KT0 104 aa12.62□□□□□ -0.39
HMGXB3-202ENST00000503427 GAGE7O76087 117 aa12.62□□□□□ -0.39
HMGXB3-202ENST00000503427 GAGE12FP0CL80 117 aa12.62□□□□□ -0.39
HMGXB3-202ENST00000503427 GAGE12GP0CL81 117 aa12.62□□□□□ -0.39
HMGXB3-202ENST00000503427 GAGE12IP0CL82 117 aa12.62□□□□□ -0.39
HMGXB3-202ENST00000503427 FREM1Q5H8C1 2179 aa12.62□□□□□ -0.39
HMGXB3-202ENST00000503427 IGLV11-55A0A075B6I3 123 aa12.61□□□□□ -0.39
HMGXB3-202ENST00000503427 GNRH2O43555 120 aa12.61□□□□□ -0.39
HMGXB3-202ENST00000503427 UTF1Q5T230 341 aa12.61□□□□□ -0.39
HMGXB3-202ENST00000503427 PCP2Q8IVA1 136 aa12.61□□□□□ -0.39
HMGXB3-202ENST00000503427 SPANXDQ9BXN6 97 aa12.61□□□□□ -0.39
HMGXB3-202ENST00000503427 F8WEM9 126 aa12.61□□□□□ -0.39
HMGXB3-202ENST00000503427 IGLV2-14P01704 120 aa12.61□□□□□ -0.39
HMGXB3-202ENST00000503427 DEFB121Q5J5C9 76 aa12.61□□□□□ -0.39
HMGXB3-202ENST00000503427 DENND4AQ7Z401 1863 aa12.61□□□□□ -0.39
HMGXB3-202ENST00000503427 GAGE12HA6NDE8 117 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms