RNA–Protein interactions for RNA: ENST00000491366.5

SEC22A-209, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

TSL 3

Gene SEC22A, Length 482 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-209ENST00000491366 C11orf52Q96A22 123 aa13.9□□□□□ -0.18
SEC22A-209ENST00000491366 SDF2L1Q9HCN8 221 aa13.9□□□□□ -0.18
SEC22A-209ENST00000491366 MDFICQ9P1T7 246 aa13.9□□□□□ -0.18
SEC22A-209ENST00000491366 GAGE12BA1L429 117 aa13.89□□□□□ -0.19
SEC22A-209ENST00000491366 GAGE7O76087 117 aa13.89□□□□□ -0.19
SEC22A-209ENST00000491366 TYMSP04818 313 aa13.89□□□□□ -0.19
SEC22A-209ENST00000491366 GAGE12FP0CL80 117 aa13.89□□□□□ -0.19
SEC22A-209ENST00000491366 GAGE12GP0CL81 117 aa13.89□□□□□ -0.19
SEC22A-209ENST00000491366 GAGE12IP0CL82 117 aa13.89□□□□□ -0.19
SEC22A-209ENST00000491366 DAZ2Q13117 558 aaKnown RBP13.89□□□□□ -0.19
SEC22A-209ENST00000491366 TDRG1Q3Y452 100 aa13.89□□□□□ -0.19
SEC22A-209ENST00000491366 BAGE2Q86Y30 109 aa13.89□□□□□ -0.19
SEC22A-209ENST00000491366 KCNS1Q96KK3 526 aa13.89□□□□□ -0.19
SEC22A-209ENST00000491366 MED9Q9NWA0 146 aa13.89□□□□□ -0.19
SEC22A-209ENST00000491366 STARD9Q9P2P6 4700 aa13.89□□□□□ -0.19
SEC22A-209ENST00000491366 TRGV1A0A0A0MS02 117 aa13.88□□□□□ -0.19
SEC22A-209ENST00000491366 RBFOX3A6NFN3 312 aa13.88□□□□□ -0.19
SEC22A-209ENST00000491366 FABP5P3A8MUU1 101 aa13.88□□□□□ -0.19
SEC22A-209ENST00000491366 IGLL5B9A064 214 aa13.88□□□□□ -0.19
SEC22A-209ENST00000491366 Q6ZTI0 123 aa13.88□□□□□ -0.19
SEC22A-209ENST00000491366 SH2D1AO60880 128 aa13.87□□□□□ -0.19
SEC22A-209ENST00000491366 CRIP1P50238 77 aa13.87□□□□□ -0.19
SEC22A-209ENST00000491366 FAM162BQ5T6X4 162 aa13.87□□□□□ -0.19
SEC22A-209ENST00000491366 MRPL16Q9NX20 251 aaKnown RBP13.87□□□□□ -0.19
SEC22A-209ENST00000491366 IGHV3-16A0A0C4DH30 117 aa13.86□□□□□ -0.19
SEC22A-209ENST00000491366 RAB19A4D1S5 217 aa13.86□□□□□ -0.19
SEC22A-209ENST00000491366 ORM1P02763 201 aa13.86□□□□□ -0.19
SEC22A-209ENST00000491366 TOR2AQ5JU69 321 aa13.86□□□□□ -0.19
SEC22A-209ENST00000491366 COX8CQ7Z4L0 72 aa13.86□□□□□ -0.19
SEC22A-209ENST00000491366 SPINK4O60575 86 aa13.85□□□□□ -0.19
SEC22A-209ENST00000491366 CENPWQ5EE01 88 aa13.85□□□□□ -0.19
SEC22A-209ENST00000491366 ZNF506Q5JVG8 444 aa13.85□□□□□ -0.19
SEC22A-209ENST00000491366 LINC00612Q8N6U2 182 aa13.85□□□□□ -0.19
SEC22A-209ENST00000491366 EIF5A2Q9GZV4 153 aaKnown RBP13.85□□□□□ -0.19
SEC22A-209ENST00000491366 TRGV2A0A075B6R0 118 aa13.84□□□□□ -0.19
SEC22A-209ENST00000491366 F5H768 121 aa13.84□□□□□ -0.19
SEC22A-209ENST00000491366 M0R036 132 aa13.84□□□□□ -0.19
SEC22A-209ENST00000491366 ATP5G1P05496 136 aa13.84□□□□□ -0.19
SEC22A-209ENST00000491366 ZNF674Q2M3X9 581 aa13.84□□□□□ -0.19
SEC22A-209ENST00000491366 PRR27Q6MZM9 219 aa13.84□□□□□ -0.19
SEC22A-209ENST00000491366 IGHV4-4A0A075B6R2 117 aa13.83□□□□□ -0.2
SEC22A-209ENST00000491366 IGKV3D-20A0A0C4DH25 116 aa13.83□□□□□ -0.2
SEC22A-209ENST00000491366 GNG4P50150 75 aa13.83□□□□□ -0.2
SEC22A-209ENST00000491366 SPXQ9BT56 116 aa13.83□□□□□ -0.2
SEC22A-209ENST00000491366 MLST8Q9BVC4 326 aa13.83□□□□□ -0.2
SEC22A-209ENST00000491366 TMSB15BA0A087X1C1 80 aa13.82□□□□□ -0.2
SEC22A-209ENST00000491366 B4DEV8 164 aa13.82□□□□□ -0.2
SEC22A-209ENST00000491366 MGST1P10620 155 aaKnown RBP13.82□□□□□ -0.2
SEC22A-209ENST00000491366 CEBPGP53567 150 aa13.82□□□□□ -0.2
SEC22A-209ENST00000491366 FAM210AQ96ND0 272 aa13.82□□□□□ -0.2
SEC22A-209ENST00000491366 TENM2Q9NT68 2774 aa13.82□□□□□ -0.2
SEC22A-209ENST00000491366 LGALS9BQ3B8N2 356 aa13.81□□□□□ -0.2
SEC22A-209ENST00000491366 GRIFINA4D1Z8 144 aa13.8□□□□□ -0.2
SEC22A-209ENST00000491366 PGPEP1LA6NFU8 196 aa13.8□□□□□ -0.2
SEC22A-209ENST00000491366 KRBOX1C9JBD0 128 aa13.8□□□□□ -0.2
SEC22A-209ENST00000491366 IGHV3-53P01767 116 aa13.8□□□□□ -0.2
SEC22A-209ENST00000491366 S100A4P26447 101 aaKnown RBP13.8□□□□□ -0.2
SEC22A-209ENST00000491366 ASIPP42127 132 aa13.8□□□□□ -0.2
SEC22A-209ENST00000491366 OR5I1Q13606 314 aa13.8□□□□□ -0.2
SEC22A-209ENST00000491366 TMEM88Q6PEY1 159 aa13.8□□□□□ -0.2
SEC22A-209ENST00000491366 TRBV20OR9-2A0A075B6H5 130 aa13.79□□□□□ -0.2
SEC22A-209ENST00000491366 TMEM250H0YL14 139 aa13.79□□□□□ -0.2
SEC22A-209ENST00000491366 M0R2P5 195 aa13.79□□□□□ -0.2
SEC22A-209ENST00000491366 IGLV2-8P01709 118 aa13.79□□□□□ -0.2
SEC22A-209ENST00000491366 NDUFAF3Q9BU61 184 aa13.79□□□□□ -0.2
SEC22A-209ENST00000491366 PARLQ9H300 379 aa13.79□□□□□ -0.2
SEC22A-209ENST00000491366 APLNQ9ULZ1 77 aa13.79□□□□□ -0.2
SEC22A-209ENST00000491366 C9JCJ5 164 aa13.78□□□□□ -0.2
SEC22A-209ENST00000491366 RNASE3P12724 160 aaKnown RBP13.78□□□□□ -0.2
SEC22A-209ENST00000491366 RPL19P84098 196 aaKnown RBP13.78□□□□□ -0.2
SEC22A-209ENST00000491366 LINC01559Q495D7 138 aa13.78□□□□□ -0.2
SEC22A-209ENST00000491366 C9orf85Q96MD7 179 aa13.78□□□□□ -0.2
SEC22A-209ENST00000491366 DYNC2H1Q8NCM8 4307 aaKnown RBP13.77□□□□□ -0.2
SEC22A-209ENST00000491366 H3BVH4 76 aa13.77□□□□□ -0.21
SEC22A-209ENST00000491366 HOXA5P20719 270 aa13.77□□□□□ -0.21
SEC22A-209ENST00000491366 TCTAP57738 103 aa13.77□□□□□ -0.21
SEC22A-209ENST00000491366 RASL10AQ92737 203 aa13.77□□□□□ -0.21
SEC22A-209ENST00000491366 C18orf15Q96N68 181 aa13.77□□□□□ -0.21
SEC22A-209ENST00000491366 LCE6AA0A183 80 aa13.76□□□□□ -0.21
SEC22A-209ENST00000491366 RAB14P61106 215 aa13.76□□□□□ -0.21
SEC22A-209ENST00000491366 SMIM12Q96EX1 92 aa13.76□□□□□ -0.21
SEC22A-209ENST00000491366 FAM210BQ96KR6 192 aa13.76□□□□□ -0.21
SEC22A-209ENST00000491366 SRP19P09132 144 aaKnown RBP13.75□□□□□ -0.21
SEC22A-209ENST00000491366 ZNF876PQ49A33 203 aa13.75□□□□□ -0.21
SEC22A-209ENST00000491366 DAZAP1Q96EP5 407 aaKnown RBP13.75□□□□□ -0.21
SEC22A-209ENST00000491366 TRAV26-1A0A087WT03 109 aa13.74□□□□□ -0.21
SEC22A-209ENST00000491366 A0A0J9YY99 117 aa13.74□□□□□ -0.21
SEC22A-209ENST00000491366 LY6G6CO95867 125 aa13.74□□□□□ -0.21
SEC22A-209ENST00000491366 SFTA3P0C7M3 94 aa13.74□□□□□ -0.21
SEC22A-209ENST00000491366 ARMS2P0C7Q2 107 aa13.74□□□□□ -0.21
SEC22A-209ENST00000491366 SRSF3P84103 164 aaKnown RBP13.73□□□□□ -0.21
SEC22A-209ENST00000491366 ZNF575Q86XF7 245 aa13.73□□□□□ -0.21
SEC22A-209ENST00000491366 OR4C5Q8NGB2 326 aa13.73□□□□□ -0.21
SEC22A-209ENST00000491366 OCC1Q8TAD7 63 aa13.73□□□□□ -0.21
SEC22A-209ENST00000491366 LINC00476Q8WZB0 136 aa13.73□□□□□ -0.21
SEC22A-209ENST00000491366 ZNF479Q96JC4 524 aa13.73□□□□□ -0.21
SEC22A-209ENST00000491366 SMIM7Q9BQ49 75 aa13.73□□□□□ -0.21
SEC22A-209ENST00000491366 IL36BQ9NZH7 164 aa13.73□□□□□ -0.21
SEC22A-209ENST00000491366 NUDT3O95989 172 aa13.72□□□□□ -0.21
SEC22A-209ENST00000491366 IFITM2Q01629 132 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms