RNA–Protein interactions for RNA: ENST00000488973.6

HMG20B-213, Transcript of high mobility group 20B, humanhuman

TSL 1 (best)

Gene HMG20B, Length 2,434 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-213ENST00000488973 TMEM160Q9NX00 188 aa15.02□□□□□ -0.01
HMG20B-213ENST00000488973 NHP2Q9NX24 153 aaKnown RBP15.02□□□□□ -0.01
HMG20B-213ENST00000488973 SPTBN2O15020 2390 aa15.01□□□□□ -0.01
HMG20B-213ENST00000488973 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa15.01□□□□□ -0.01
HMG20B-213ENST00000488973 ZFAND3Q9H8U3 227 aa15.01□□□□□ -0.01
HMG20B-213ENST00000488973 PRO0461Q9UI25 63 aa15.01□□□□□ -0.01
HMG20B-213ENST00000488973 IGHV3OR16-8A0A075B7F1 116 aa15.01□□□□□ -0.01
HMG20B-213ENST00000488973 IGHV7-81A0A0B4J1V7 117 aa15.01□□□□□ -0.01
HMG20B-213ENST00000488973 TRAV40A0A0B4J280 105 aa15.01□□□□□ -0.01
HMG20B-213ENST00000488973 ID1P41134 155 aa15.01□□□□□ -0.01
HMG20B-213ENST00000488973 VMO1Q7Z5L0 202 aa15.01□□□□□ -0.01
HMG20B-213ENST00000488973 NRACQ8N912 160 aa15.01□□□□□ -0.01
HMG20B-213ENST00000488973 VKORC1Q9BQB6 163 aa15.01□□□□□ -0.01
HMG20B-213ENST00000488973 MRPL35Q9NZE8 188 aaKnown RBP15.01□□□□□ -0.01
HMG20B-213ENST00000488973 ATMQ13315 3056 aa15□□□□□ -0.01
HMG20B-213ENST00000488973 TRGV3P03979 118 aa15□□□□□ -0.01
HMG20B-213ENST00000488973 XGP55808 180 aa15□□□□□ -0.01
HMG20B-213ENST00000488973 RNF182Q8N6D2 247 aa15□□□□□ -0.01
HMG20B-213ENST00000488973 CITED1Q99966 193 aa15□□□□□ -0.01
HMG20B-213ENST00000488973 C11orf21Q9P2W6 132 aa15□□□□□ -0.01
HMG20B-213ENST00000488973 A0A087WX48 190 aa14.99□□□□□ -0.01
HMG20B-213ENST00000488973 IGHV3-35A0A0C4DH35 117 aa14.99□□□□□ -0.01
HMG20B-213ENST00000488973 APOMO95445 188 aa14.99□□□□□ -0.01
HMG20B-213ENST00000488973 ZFAND6Q6FIF0 208 aa14.99□□□□□ -0.01
HMG20B-213ENST00000488973 AGPAT4-IT1Q9H0P7 198 aa14.99□□□□□ -0.01
HMG20B-213ENST00000488973 MINOS1Q5TGZ0 78 aa14.98□□□□□ -0.01
HMG20B-213ENST00000488973 VCX2Q9H322 139 aa14.98□□□□□ -0.01
HMG20B-213ENST00000488973 MINOS1-NBL1R4GNA1 71 aa14.98□□□□□ -0.01
HMG20B-213ENST00000488973 IGHV4-4A0A075B6R2 117 aa14.98□□□□□ -0.01
HMG20B-213ENST00000488973 IGHV7-4-1A0A0J9YVY3 117 aa14.98□□□□□ -0.01
HMG20B-213ENST00000488973 KLK9Q2XQG4 91 aa14.98□□□□□ -0.01
HMG20B-213ENST00000488973 FAM110DQ8TAY7 271 aaPredicted RBP14.98□□□□□ -0.01
HMG20B-213ENST00000488973 KLK9Q9UKQ9 250 aa14.98□□□□□ -0.01
HMG20B-213ENST00000488973 AGRNO00468 2067 aa14.98□□□□□ -0.01
HMG20B-213ENST00000488973 GAGE12JA6NER3 117 aa14.97□□□□□ -0.01
HMG20B-213ENST00000488973 IGLL5B9A064 214 aa14.97□□□□□ -0.01
HMG20B-213ENST00000488973 H3BMG7 143 aa14.97□□□□□ -0.01
HMG20B-213ENST00000488973 GAGE7O76087 117 aa14.97□□□□□ -0.01
HMG20B-213ENST00000488973 LY6HO94772 140 aa14.97□□□□□ -0.01
HMG20B-213ENST00000488973 GAGE12FP0CL80 117 aa14.97□□□□□ -0.01
HMG20B-213ENST00000488973 GAGE12GP0CL81 117 aa14.97□□□□□ -0.01
HMG20B-213ENST00000488973 GAGE12IP0CL82 117 aa14.97□□□□□ -0.01
HMG20B-213ENST00000488973 GAGE4Q13068 117 aa14.97□□□□□ -0.01
HMG20B-213ENST00000488973 C15orf32Q32M92 178 aa14.97□□□□□ -0.01
HMG20B-213ENST00000488973 MAPKAPK5-AS1Q8N8E1 139 aa14.97□□□□□ -0.01
HMG20B-213ENST00000488973 NHLRC4P0CG21 123 aaPredicted RBP14.97□□□□□ -0.01
HMG20B-213ENST00000488973 PLNP26678 52 aa14.97□□□□□ -0.01
HMG20B-213ENST00000488973 MRPL53Q96EL3 112 aaKnown RBP14.97□□□□□ -0.01
HMG20B-213ENST00000488973 TMEM78Q5T7P6 136 aa14.96□□□□□ -0.01
HMG20B-213ENST00000488973 TEX29Q8N6K0 151 aa14.96□□□□□ -0.01
HMG20B-213ENST00000488973 Q8N9W7 124 aa14.96□□□□□ -0.01
HMG20B-213ENST00000488973 CEP295Q9C0D2 2601 aa14.96□□□□□ -0.02
HMG20B-213ENST00000488973 CLPSL1A2RUU4 121 aa14.95□□□□□ -0.02
HMG20B-213ENST00000488973 PF4V1P10720 104 aa14.95□□□□□ -0.02
HMG20B-213ENST00000488973 TRAV12-1A0A0B4J245 112 aa14.94□□□□□ -0.02
HMG20B-213ENST00000488973 A0A1B0GWB2 263 aa14.94□□□□□ -0.02
HMG20B-213ENST00000488973 C12orf74Q32Q52 190 aa14.94□□□□□ -0.02
HMG20B-213ENST00000488973 FBXL19-AS1Q494R0 122 aa14.94□□□□□ -0.02
HMG20B-213ENST00000488973 WNK2Q9Y3S1 2297 aa14.94□□□□□ -0.02
HMG20B-213ENST00000488973 PTPRQQ9UMZ3 2332 aa14.94□□□□□ -0.02
HMG20B-213ENST00000488973 DCHS2Q6V1P9 2916 aa14.94□□□□□ -0.02
HMG20B-213ENST00000488973 TRAV8-2A0A0B4J237 113 aa14.94□□□□□ -0.02
HMG20B-213ENST00000488973 TRAV26-2A0A0B4J265 109 aa14.94□□□□□ -0.02
HMG20B-213ENST00000488973 LINC01619G3V211 115 aa14.94□□□□□ -0.02
HMG20B-213ENST00000488973 C9orf47Q6ZRZ4 202 aa14.94□□□□□ -0.02
HMG20B-213ENST00000488973 KLRB1Q12918 225 aa14.93□□□□□ -0.02
HMG20B-213ENST00000488973 SPANXN1Q5VSR9 72 aa14.93□□□□□ -0.02
HMG20B-213ENST00000488973 LRBAP50851 2863 aa14.93□□□□□ -0.02
HMG20B-213ENST00000488973 VPREB3Q9UKI3 123 aa14.93□□□□□ -0.02
HMG20B-213ENST00000488973 IGHV3-66A0A0C4DH42 116 aa14.92□□□□□ -0.02
HMG20B-213ENST00000488973 H7C1H1 209 aa14.92□□□□□ -0.02
HMG20B-213ENST00000488973 CSMD1Q96PZ7 3565 aa14.92□□□□□ -0.02
HMG20B-213ENST00000488973 FAM90A27PA6NNH2 459 aa14.92□□□□□ -0.02
HMG20B-213ENST00000488973 F8VRH5 84 aa14.92□□□□□ -0.02
HMG20B-213ENST00000488973 GRNP28799 593 aaKnown RBP14.92□□□□□ -0.02
HMG20B-213ENST00000488973 EFNA4P52798 201 aa14.92□□□□□ -0.02
HMG20B-213ENST00000488973 HIST1H4GQ99525 98 aa14.92□□□□□ -0.02
HMG20B-213ENST00000488973 ABCA4P78363 2273 aa14.92□□□□□ -0.02
HMG20B-213ENST00000488973 ANKHD1Q8IWZ3 2542 aaKnown RBP14.92□□□□□ -0.02
HMG20B-213ENST00000488973 ECSCRQ19T08 205 aa14.91□□□□□ -0.02
HMG20B-213ENST00000488973 SMIM2Q9BVW6 85 aa14.91□□□□□ -0.02
HMG20B-213ENST00000488973 TRBV7-3A0A075B6L6 115 aa14.91□□□□□ -0.02
HMG20B-213ENST00000488973 CENPVL3A0A0U1RRI6 287 aa14.91□□□□□ -0.02
HMG20B-213ENST00000488973 PRSS29PA6NIE9 313 aa14.91□□□□□ -0.02
HMG20B-213ENST00000488973 K7EMI3 77 aa14.91□□□□□ -0.02
HMG20B-213ENST00000488973 SRD5A1P18405 259 aa14.91□□□□□ -0.02
HMG20B-213ENST00000488973 ATP5J2P56134 94 aa14.91□□□□□ -0.02
HMG20B-213ENST00000488973 C5orf47Q569G3 176 aa14.91□□□□□ -0.02
HMG20B-213ENST00000488973 CCDC140Q96MF4 163 aa14.91□□□□□ -0.02
HMG20B-213ENST00000488973 FHL3Q13643 280 aa14.9□□□□□ -0.02
HMG20B-213ENST00000488973 CLEC19AQ6UXS0 136 aa14.9□□□□□ -0.02
HMG20B-213ENST00000488973 METTL26Q96S19 204 aa14.9□□□□□ -0.02
HMG20B-213ENST00000488973 ORMDL2Q53FV1 153 aa14.9□□□□□ -0.02
HMG20B-213ENST00000488973 ATP6V0E1O15342 81 aa14.89□□□□□ -0.03
HMG20B-213ENST00000488973 SLC25A16P16260 332 aa14.89□□□□□ -0.03
HMG20B-213ENST00000488973 RRN3P1Q2M238 152 aa14.88□□□□□ -0.03
HMG20B-213ENST00000488973 EEF1AKMT3Q96AZ1 226 aa14.88□□□□□ -0.03
HMG20B-213ENST00000488973 U3KQE9 123 aa14.88□□□□□ -0.03
HMG20B-213ENST00000488973 IGHV3OR16-13A0A075B7E8 117 aa14.88□□□□□ -0.03
HMG20B-213ENST00000488973 IGHV3-74A0A0B4J1X5 117 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 142 ms