RNA–Protein interactions for RNA: ENST00000487709.1

HMGB1P36-201, Transcript of high mobility group box 1 pseudogene 36, humanhuman

BASIC

Gene HMGB1P36, Length 576 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P36-201ENST00000487709 A6NN06 94 aa1.16□□□□□ -2.22
HMGB1P36-201ENST00000487709 F6UZH7 168 aa1.16□□□□□ -2.22
HMGB1P36-201ENST00000487709 GEMIN2O14893 280 aaKnown RBP1.16□□□□□ -2.22
HMGB1P36-201ENST00000487709 RNASE3P12724 160 aaKnown RBP1.16□□□□□ -2.22
HMGB1P36-201ENST00000487709 ZCCHC23Q6ZST2 131 aa1.16□□□□□ -2.22
HMGB1P36-201ENST00000487709 Q6ZUT4 128 aa1.16□□□□□ -2.22
HMGB1P36-201ENST00000487709 PATE1Q8WXA2 126 aa1.16□□□□□ -2.22
HMGB1P36-201ENST00000487709 DPH3Q96FX2 82 aa1.16□□□□□ -2.22
HMGB1P36-201ENST00000487709 C12orf57Q99622 126 aa1.16□□□□□ -2.22
HMGB1P36-201ENST00000487709 REG4Q9BYZ8 158 aa1.16□□□□□ -2.22
HMGB1P36-201ENST00000487709 EIF4G3O43432 1585 aaKnown RBP1.16□□□□□ -2.22
HMGB1P36-201ENST00000487709 CPAMD8Q8IZJ3 1885 aa1.16□□□□□ -2.22
HMGB1P36-201ENST00000487709 ANKRD31Q8N7Z5 1873 aa1.16□□□□□ -2.22
HMGB1P36-201ENST00000487709 XIRP1Q702N8 1843 aaKnown RBP1.15□□□□□ -2.22
HMGB1P36-201ENST00000487709 TENM1Q9UKZ4 2725 aa1.15□□□□□ -2.23
HMGB1P36-201ENST00000487709 TRBV6-4A0A1B0GX49 114 aa1.15□□□□□ -2.23
HMGB1P36-201ENST00000487709 A0A1W2PRS3 328 aa1.15□□□□□ -2.23
HMGB1P36-201ENST00000487709 C20orf202A1L168 122 aa1.15□□□□□ -2.23
HMGB1P36-201ENST00000487709 ATP6V1G2-DDX39BF2Z307 99 aa1.15□□□□□ -2.23
HMGB1P36-201ENST00000487709 CORTO00230 105 aa1.15□□□□□ -2.23
HMGB1P36-201ENST00000487709 NUPR1O60356 82 aa1.15□□□□□ -2.23
HMGB1P36-201ENST00000487709 SNAPC5O75971 98 aa1.15□□□□□ -2.23
HMGB1P36-201ENST00000487709 IGHV3-33P01772 117 aa1.15□□□□□ -2.23
HMGB1P36-201ENST00000487709 ADCYAP1P18509 176 aa1.15□□□□□ -2.23
HMGB1P36-201ENST00000487709 BTG2P78543 158 aa1.15□□□□□ -2.23
HMGB1P36-201ENST00000487709 MPV17LQ2QL34 196 aa1.15□□□□□ -2.23
HMGB1P36-201ENST00000487709 MIC13Q5XKP0 118 aa1.15□□□□□ -2.23
HMGB1P36-201ENST00000487709 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.15□□□□□ -2.23
HMGB1P36-201ENST00000487709 LINC00299Q6ZSB3 139 aa1.15□□□□□ -2.23
HMGB1P36-201ENST00000487709 SLC25A26Q70HW3 274 aa1.15□□□□□ -2.23
HMGB1P36-201ENST00000487709 VSTM2AQ8TAG5 236 aa1.15□□□□□ -2.23
HMGB1P36-201ENST00000487709 DYNLRB2Q8TF09 96 aa1.15□□□□□ -2.23
HMGB1P36-201ENST00000487709 PP6455Q8WZ26 134 aa1.15□□□□□ -2.23
HMGB1P36-201ENST00000487709 SPANXDQ9BXN6 97 aa1.15□□□□□ -2.23
HMGB1P36-201ENST00000487709 NAA60Q9H7X0 242 aa1.15□□□□□ -2.23
HMGB1P36-201ENST00000487709 CDC42SE1Q9NRR8 79 aa1.15□□□□□ -2.23
HMGB1P36-201ENST00000487709 SCN3BQ9NY72 215 aa1.15□□□□□ -2.23
HMGB1P36-201ENST00000487709 ZNF518AQ6AHZ1 1483 aa1.15□□□□□ -2.23
HMGB1P36-201ENST00000487709 STRCQ7RTU9 1775 aa1.15□□□□□ -2.23
HMGB1P36-201ENST00000487709 FER1L6Q2WGJ9 1857 aa1.14□□□□□ -2.23
HMGB1P36-201ENST00000487709 IGLV3-32A0A0A0MS00 114 aa1.14□□□□□ -2.23
HMGB1P36-201ENST00000487709 PIPP12273 146 aaPredicted RBP1.14□□□□□ -2.23
HMGB1P36-201ENST00000487709 GNG4P50150 75 aa1.14□□□□□ -2.23
HMGB1P36-201ENST00000487709 POLR2JP52435 117 aaKnown RBP1.14□□□□□ -2.23
HMGB1P36-201ENST00000487709 RHOHQ15669 191 aa1.14□□□□□ -2.23
HMGB1P36-201ENST00000487709 OR2T2Q6IF00 324 aa1.14□□□□□ -2.23
HMGB1P36-201ENST00000487709 PLPP5Q8NEB5 264 aa1.14□□□□□ -2.23
HMGB1P36-201ENST00000487709 PPDPFLQ8WWR9 84 aa1.14□□□□□ -2.23
HMGB1P36-201ENST00000487709 MYOFQ9NZM1 2061 aa1.14□□□□□ -2.23
HMGB1P36-201ENST00000487709 BCL9LQ86UU0 1499 aa1.13□□□□□ -2.23
HMGB1P36-201ENST00000487709 TRAV17A0A0B4J275 112 aa1.13□□□□□ -2.23
HMGB1P36-201ENST00000487709 PIGBOS1A0A0B4J2F0 54 aa1.13□□□□□ -2.23
HMGB1P36-201ENST00000487709 SNCGO76070 127 aa1.13□□□□□ -2.23
HMGB1P36-201ENST00000487709 DNAL4O96015 105 aa1.13□□□□□ -2.23
HMGB1P36-201ENST00000487709 IL5P05113 134 aa1.13□□□□□ -2.23
HMGB1P36-201ENST00000487709 SMIM6P0DI80 62 aa1.13□□□□□ -2.23
HMGB1P36-201ENST00000487709 HIST1H1DP16402 221 aaKnown RBP1.13□□□□□ -2.23
HMGB1P36-201ENST00000487709 UNQ5815/PRO19632Q6UWF5 114 aa1.13□□□□□ -2.23
HMGB1P36-201ENST00000487709 SPTSSAQ969W0 71 aa1.13□□□□□ -2.23
HMGB1P36-201ENST00000487709 SEC11CQ9BY50 192 aa1.13□□□□□ -2.23
HMGB1P36-201ENST00000487709 AGPAT4-IT1Q9H0P7 198 aa1.13□□□□□ -2.23
HMGB1P36-201ENST00000487709 TMEM242Q9NWH2 141 aa1.13□□□□□ -2.23
HMGB1P36-201ENST00000487709 TMEM14CQ9P0S9 112 aa1.13□□□□□ -2.23
HMGB1P36-201ENST00000487709 ZFP30Q9Y2G7 519 aa1.13□□□□□ -2.23
HMGB1P36-201ENST00000487709 CCDC88AQ3V6T2 1871 aa1.13□□□□□ -2.23
HMGB1P36-201ENST00000487709 CECR2Q9BXF3 1484 aa1.12□□□□□ -2.23
HMGB1P36-201ENST00000487709 MBD5Q9P267 1494 aa1.12□□□□□ -2.23
HMGB1P36-201ENST00000487709 A0A0J9YY99 117 aa1.12□□□□□ -2.23
HMGB1P36-201ENST00000487709 LOC100130705A0A1B0GUX0 176 aa1.12□□□□□ -2.23
HMGB1P36-201ENST00000487709 TMEM30CPA0ZSE6 113 aa1.12□□□□□ -2.23
HMGB1P36-201ENST00000487709 JMJD7-PLA2G4BH0Y9G9 81 aa1.12□□□□□ -2.23
HMGB1P36-201ENST00000487709 CCDC179H3BU77 68 aa1.12□□□□□ -2.23
HMGB1P36-201ENST00000487709 M0R2N4 97 aa1.12□□□□□ -2.23
HMGB1P36-201ENST00000487709 PITX3O75364 302 aa1.12□□□□□ -2.23
HMGB1P36-201ENST00000487709 NDUFB6O95139 128 aa1.12□□□□□ -2.23
HMGB1P36-201ENST00000487709 PPYP01298 95 aa1.12□□□□□ -2.23
HMGB1P36-201ENST00000487709 PIRTP0C851 137 aa1.12□□□□□ -2.23
HMGB1P36-201ENST00000487709 IL7P13232 177 aa1.12□□□□□ -2.23
HMGB1P36-201ENST00000487709 TPPP2P59282 170 aa1.12□□□□□ -2.23
HMGB1P36-201ENST00000487709 PPP3R1P63098 170 aa1.12□□□□□ -2.23
HMGB1P36-201ENST00000487709 Q56UQ5 140 aa1.12□□□□□ -2.23
HMGB1P36-201ENST00000487709 SPANXN1Q5VSR9 72 aa1.12□□□□□ -2.23
HMGB1P36-201ENST00000487709 RPL7L1Q6DKI1 246 aaKnown RBP1.12□□□□□ -2.23
HMGB1P36-201ENST00000487709 PPP3R2Q96LZ3 170 aa1.12□□□□□ -2.23
HMGB1P36-201ENST00000487709 BOKQ9UMX3 212 aaPredicted RBP1.12□□□□□ -2.23
HMGB1P36-201ENST00000487709 SERP1Q9Y6X1 66 aa1.12□□□□□ -2.23
HMGB1P36-201ENST00000487709 RIMS1Q86UR5 1692 aaKnown RBP1.12□□□□□ -2.23
HMGB1P36-201ENST00000487709 COL6A6A6NMZ7 2263 aa1.12□□□□□ -2.23
HMGB1P36-201ENST00000487709 MGAMO43451 1857 aa1.12□□□□□ -2.23
HMGB1P36-201ENST00000487709 CFTRP13569 1480 aa1.12□□□□□ -2.23
HMGB1P36-201ENST00000487709 LAMB4A4D0S4 1761 aa1.11□□□□□ -2.23
HMGB1P36-201ENST00000487709 MYH7BA7E2Y1 1941 aa1.11□□□□□ -2.23
HMGB1P36-201ENST00000487709 KTN1Q86UP2 1357 aaKnown RBP1.11□□□□□ -2.23
HMGB1P36-201ENST00000487709 HEATR5BQ9P2D3 2071 aa1.11□□□□□ -2.23
HMGB1P36-201ENST00000487709 VIRMAQ69YN4 1812 aaKnown RBP1.11□□□□□ -2.23
HMGB1P36-201ENST00000487709 A6NIN4 97 aa1.11□□□□□ -2.23
HMGB1P36-201ENST00000487709 APOC4-APOC2K7ER74 178 aa1.11□□□□□ -2.23
HMGB1P36-201ENST00000487709 INE1O15225 51 aa1.11□□□□□ -2.23
HMGB1P36-201ENST00000487709 CCL25O15444 150 aa1.11□□□□□ -2.23
HMGB1P36-201ENST00000487709 TNFP01375 233 aa1.11□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms