RNA–Protein interactions for RNA: ENST00000483407.1

CSDE1-207, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 741 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-207ENST00000483407 LYPD5Q6UWN5 251 aa3.99□□□□□ -1.77
CSDE1-207ENST00000483407 NEGR1Q7Z3B1 354 aa3.99□□□□□ -1.77
CSDE1-207ENST00000483407 NRARPQ7Z6K4 114 aa3.99□□□□□ -1.77
CSDE1-207ENST00000483407 PCNPQ8WW12 178 aaKnown RBP3.99□□□□□ -1.77
CSDE1-207ENST00000483407 VGLL1Q99990 258 aa3.99□□□□□ -1.77
CSDE1-207ENST00000483407 C20orf85Q9H1P6 137 aa3.99□□□□□ -1.77
CSDE1-207ENST00000483407 UQCC1Q9NVA1 299 aa3.99□□□□□ -1.77
CSDE1-207ENST00000483407 FLVCR2Q9UPI3 526 aa3.99□□□□□ -1.77
CSDE1-207ENST00000483407 HHLA3Q9XRX5 114 aa3.99□□□□□ -1.77
CSDE1-207ENST00000483407 RCL1Q9Y2P8 373 aaKnown RBP3.99□□□□□ -1.77
CSDE1-207ENST00000483407 KLF12Q9Y4X4 402 aa3.99□□□□□ -1.77
CSDE1-207ENST00000483407 LY96Q9Y6Y9 160 aa3.99□□□□□ -1.77
CSDE1-207ENST00000483407 APOBP04114 4563 aaKnown RBP3.99□□□□□ -1.77
CSDE1-207ENST00000483407 IGHV1OR15-1A0A075B7D0 117 aa3.98□□□□□ -1.77
CSDE1-207ENST00000483407 TRAV5A0A0B4J249 113 aa3.98□□□□□ -1.77
CSDE1-207ENST00000483407 TRGV4A0A0C4DH28 118 aa3.98□□□□□ -1.77
CSDE1-207ENST00000483407 CCDC160A6NGH7 325 aa3.98□□□□□ -1.77
CSDE1-207ENST00000483407 M0R3E3 92 aa3.98□□□□□ -1.77
CSDE1-207ENST00000483407 PRAF2O60831 178 aa3.98□□□□□ -1.77
CSDE1-207ENST00000483407 CST7O76096 145 aa3.98□□□□□ -1.77
CSDE1-207ENST00000483407 DNAH10OSP0CZ25 163 aa3.98□□□□□ -1.77
CSDE1-207ENST00000483407 HIST1H1EP10412 219 aaKnown RBP3.98□□□□□ -1.77
CSDE1-207ENST00000483407 CRISP2P16562 243 aa3.98□□□□□ -1.77
CSDE1-207ENST00000483407 PVALBP20472 110 aaPredicted RBP3.98□□□□□ -1.77
CSDE1-207ENST00000483407 SRIP30626 198 aa3.98□□□□□ -1.77
CSDE1-207ENST00000483407 RPL29P47914 159 aaKnown RBP3.98□□□□□ -1.77
CSDE1-207ENST00000483407 CRYBA4P53673 196 aa3.98□□□□□ -1.77
CSDE1-207ENST00000483407 BAXQ07812 192 aa3.98□□□□□ -1.77
CSDE1-207ENST00000483407 CD300CQ08708 224 aa3.98□□□□□ -1.77
CSDE1-207ENST00000483407 ZNF415Q09FC8 603 aa3.98□□□□□ -1.77
CSDE1-207ENST00000483407 PDE6HQ13956 83 aa3.98□□□□□ -1.77
CSDE1-207ENST00000483407 ZNF674Q2M3X9 581 aa3.98□□□□□ -1.77
CSDE1-207ENST00000483407 CNPY1Q3B7I2 92 aa3.98□□□□□ -1.77
CSDE1-207ENST00000483407 TMEM78Q5T7P6 136 aa3.98□□□□□ -1.77
CSDE1-207ENST00000483407 C10orf126Q8N4M7 172 aa3.98□□□□□ -1.77
CSDE1-207ENST00000483407 MITD1Q8WV92 249 aa3.98□□□□□ -1.77
CSDE1-207ENST00000483407 SRRQ9GZT4 340 aa3.98□□□□□ -1.77
CSDE1-207ENST00000483407 AGPAT4-IT1Q9H0P7 198 aa3.98□□□□□ -1.77
CSDE1-207ENST00000483407 SLC39A9Q9NUM3 307 aa3.98□□□□□ -1.77
CSDE1-207ENST00000483407 MRPL16Q9NX20 251 aaKnown RBP3.98□□□□□ -1.77
CSDE1-207ENST00000483407 TMEM14CQ9P0S9 112 aa3.98□□□□□ -1.77
CSDE1-207ENST00000483407 WDR83OSQ9Y284 106 aa3.98□□□□□ -1.77
CSDE1-207ENST00000483407 LSM5Q9Y4Y9 91 aaKnown RBP3.98□□□□□ -1.77
CSDE1-207ENST00000483407 TNFRSF18Q9Y5U5 241 aa3.98□□□□□ -1.77
CSDE1-207ENST00000483407 SRRM2Q9UQ35 2752 aaKnown RBP3.98□□□□□ -1.77
CSDE1-207ENST00000483407 UBE2L5PA0A1B0GUS4 154 aa3.97□□□□□ -1.77
CSDE1-207ENST00000483407 C5orf51A6NDU8 294 aa3.97□□□□□ -1.77
CSDE1-207ENST00000483407 FAM24AA6NFZ4 105 aa3.97□□□□□ -1.77
CSDE1-207ENST00000483407 FAM25EA8MYX2 175 aa3.97□□□□□ -1.77
CSDE1-207ENST00000483407 E5RGE8 158 aa3.97□□□□□ -1.77
CSDE1-207ENST00000483407 PSCAO43653 123 aa3.97□□□□□ -1.77
CSDE1-207ENST00000483407 ORM1P02763 201 aa3.97□□□□□ -1.77
CSDE1-207ENST00000483407 IGKV2-30P06310 120 aa3.97□□□□□ -1.77
CSDE1-207ENST00000483407 S100A11P31949 105 aa3.97□□□□□ -1.77
CSDE1-207ENST00000483407 KRTAP10-1P60331 282 aa3.97□□□□□ -1.77
CSDE1-207ENST00000483407 HBG1P69891 147 aa3.97□□□□□ -1.77
CSDE1-207ENST00000483407 HBG2P69892 147 aa3.97□□□□□ -1.77
CSDE1-207ENST00000483407 GAGE5Q13069 117 aa3.97□□□□□ -1.77
CSDE1-207ENST00000483407 GAGE6Q13070 117 aa3.97□□□□□ -1.77
CSDE1-207ENST00000483407 STX12Q86Y82 276 aa3.97□□□□□ -1.77
CSDE1-207ENST00000483407 BLNKQ8WV28 456 aa3.97□□□□□ -1.77
CSDE1-207ENST00000483407 ZNF479Q96JC4 524 aa3.97□□□□□ -1.77
CSDE1-207ENST00000483407 FAM19A4Q96LR4 140 aa3.97□□□□□ -1.77
CSDE1-207ENST00000483407 TXNDC17Q9BRA2 123 aa3.97□□□□□ -1.77
CSDE1-207ENST00000483407 MRPL32Q9BYC8 188 aaKnown RBP3.97□□□□□ -1.77
CSDE1-207ENST00000483407 GPN1Q9HCN4 374 aaPredicted RBP3.97□□□□□ -1.77
CSDE1-207ENST00000483407 ZNF492Q9P255 531 aa3.97□□□□□ -1.77
CSDE1-207ENST00000483407 IGKV2-40A0A087WW87 121 aaPredicted RBP3.96□□□□□ -1.78
CSDE1-207ENST00000483407 TRBV7-9A0A0J9YWB2 115 aa3.96□□□□□ -1.78
CSDE1-207ENST00000483407 C9JCJ5 164 aa3.96□□□□□ -1.78
CSDE1-207ENST00000483407 K7EQD1 137 aa3.96□□□□□ -1.78
CSDE1-207ENST00000483407 CCSO14618 274 aa3.96□□□□□ -1.78
CSDE1-207ENST00000483407 IGKV2D-40P01614 121 aaPredicted RBP3.96□□□□□ -1.78
CSDE1-207ENST00000483407 SMR3BP02814 79 aaPredicted RBP3.96□□□□□ -1.78
CSDE1-207ENST00000483407 CRYGDP07320 174 aa3.96□□□□□ -1.78
CSDE1-207ENST00000483407 PYYP10082 97 aa3.96□□□□□ -1.78
CSDE1-207ENST00000483407 FGF7P21781 194 aa3.96□□□□□ -1.78
CSDE1-207ENST00000483407 CSN1S1P47710 185 aa3.96□□□□□ -1.78
CSDE1-207ENST00000483407 SULT1A1P50225 295 aa3.96□□□□□ -1.78
CSDE1-207ENST00000483407 S100A10P60903 97 aa3.96□□□□□ -1.78
CSDE1-207ENST00000483407 ATP6V1FQ16864 119 aa3.96□□□□□ -1.78
CSDE1-207ENST00000483407 LBHQ53QV2 105 aaPredicted RBP3.96□□□□□ -1.78
CSDE1-207ENST00000483407 SH2D6Q7Z4S9 175 aa3.96□□□□□ -1.78
CSDE1-207ENST00000483407 WFDC10BQ8IUB3 73 aa3.96□□□□□ -1.78
CSDE1-207ENST00000483407 IQCF2Q8IXL9 164 aa3.96□□□□□ -1.78
CSDE1-207ENST00000483407 EXOC3-AS1Q8N2X6 119 aa3.96□□□□□ -1.78
CSDE1-207ENST00000483407 ZFAND2AQ8N6M9 145 aa3.96□□□□□ -1.78
CSDE1-207ENST00000483407 SPXQ9BT56 116 aa3.96□□□□□ -1.78
CSDE1-207ENST00000483407 TMEM70Q9BUB7 260 aa3.96□□□□□ -1.78
CSDE1-207ENST00000483407 TP53TG3Q9ULZ0 132 aa3.96□□□□□ -1.78
CSDE1-207ENST00000483407 NBEAP1P0C6P0 100 aa3.95□□□□□ -1.78
CSDE1-207ENST00000483407 SFTA3P0C7M3 94 aa3.95□□□□□ -1.78
CSDE1-207ENST00000483407 BTCP35070 178 aa3.95□□□□□ -1.78
CSDE1-207ENST00000483407 ZNF138P52744 262 aa3.95□□□□□ -1.78
CSDE1-207ENST00000483407 MUC21Q5SSG8 566 aa3.95□□□□□ -1.78
CSDE1-207ENST00000483407 PRR9Q5T870 116 aa3.95□□□□□ -1.78
CSDE1-207ENST00000483407 FAM159AQ6UWV7 190 aa3.95□□□□□ -1.78
CSDE1-207ENST00000483407 TMEM252Q8N6L7 170 aa3.95□□□□□ -1.78
CSDE1-207ENST00000483407 OR10G4Q8NGN3 311 aa3.95□□□□□ -1.78
CSDE1-207ENST00000483407 C2orf50Q96LR7 162 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 91.5 ms