RNA–Protein interactions for RNA: ENST00000482251.2

CPSF4-212, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 574 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-212ENST00000482251 OR2T35Q8NGX2 323 aa7.18□□□□□ -1.26
CPSF4-212ENST00000482251 PCNPQ8WW12 178 aaKnown RBP7.18□□□□□ -1.26
CPSF4-212ENST00000482251 NDFIP1Q9BT67 221 aa7.18□□□□□ -1.26
CPSF4-212ENST00000482251 SDF2L1Q9HCN8 221 aa7.18□□□□□ -1.26
CPSF4-212ENST00000482251 RYR1P21817 5038 aa7.18□□□□□ -1.26
CPSF4-212ENST00000482251 C9JCJ5 164 aa7.17□□□□□ -1.26
CPSF4-212ENST00000482251 K7EQD1 137 aa7.17□□□□□ -1.26
CPSF4-212ENST00000482251 M0R2P5 195 aa7.17□□□□□ -1.26
CPSF4-212ENST00000482251 CXorf1O96002 111 aa7.17□□□□□ -1.26
CPSF4-212ENST00000482251 MBP02144 154 aa7.17□□□□□ -1.26
CPSF4-212ENST00000482251 UBE2G2P60604 165 aa7.17□□□□□ -1.26
CPSF4-212ENST00000482251 SUMO1P63165 101 aaKnown RBP7.17□□□□□ -1.26
CPSF4-212ENST00000482251 ZNF726P1Q15940 193 aa7.17□□□□□ -1.26
CPSF4-212ENST00000482251 MRPL23Q16540 153 aaKnown RBP7.17□□□□□ -1.26
CPSF4-212ENST00000482251 TDRG1Q3Y452 100 aa7.17□□□□□ -1.26
CPSF4-212ENST00000482251 NEGR1Q7Z3B1 354 aa7.17□□□□□ -1.26
CPSF4-212ENST00000482251 PRNTQ86SH4 94 aa7.17□□□□□ -1.26
CPSF4-212ENST00000482251 OR4C5Q8NGB2 326 aa7.17□□□□□ -1.26
CPSF4-212ENST00000482251 ASB13Q8WXK3 278 aa7.17□□□□□ -1.26
CPSF4-212ENST00000482251 RASL10AQ92737 203 aa7.17□□□□□ -1.26
CPSF4-212ENST00000482251 SPXQ9BT56 116 aa7.17□□□□□ -1.26
CPSF4-212ENST00000482251 ACTR3CQ9C0K3 210 aaPredicted RBP7.17□□□□□ -1.26
CPSF4-212ENST00000482251 TNFSF18Q9UNG2 199 aa7.17□□□□□ -1.26
CPSF4-212ENST00000482251 BORCS7-ASMTA0A0B4J1R7 106 aa7.16□□□□□ -1.26
CPSF4-212ENST00000482251 TRAV4A0A0B4J268 109 aa7.16□□□□□ -1.26
CPSF4-212ENST00000482251 TRAV34A0A0B4J273 112 aa7.16□□□□□ -1.26
CPSF4-212ENST00000482251 A0A1W2PPQ1 181 aa7.16□□□□□ -1.26
CPSF4-212ENST00000482251 G3V3Q6 166 aa7.16□□□□□ -1.26
CPSF4-212ENST00000482251 SMLR1H3BR10 107 aa7.16□□□□□ -1.26
CPSF4-212ENST00000482251 K7EQM0 130 aa7.16□□□□□ -1.26
CPSF4-212ENST00000482251 ARPC5O15511 151 aa7.16□□□□□ -1.26
CPSF4-212ENST00000482251 GCGP01275 180 aa7.16□□□□□ -1.26
CPSF4-212ENST00000482251 FUSP35637 526 aaKnown RBP eCLIP7.16□□□□□ -1.26
CPSF4-212ENST00000482251 FGF8P55075 233 aaPredicted RBP7.16□□□□□ -1.26
CPSF4-212ENST00000482251 KRTAP10-2P60368 255 aa7.16□□□□□ -1.26
CPSF4-212ENST00000482251 SERF2P84101 59 aa7.16□□□□□ -1.26
CPSF4-212ENST00000482251 FLI1Q01543 452 aaPredicted RBP7.16□□□□□ -1.26
CPSF4-212ENST00000482251 SLAQ13239 276 aa7.16□□□□□ -1.26
CPSF4-212ENST00000482251 LYPD5Q6UWN5 251 aa7.16□□□□□ -1.26
CPSF4-212ENST00000482251 WFDC10BQ8IUB3 73 aa7.16□□□□□ -1.26
CPSF4-212ENST00000482251 CYB561D1Q8N8Q1 229 aa7.16□□□□□ -1.26
CPSF4-212ENST00000482251 TMEM167BQ9NRX6 74 aa7.16□□□□□ -1.26
CPSF4-212ENST00000482251 C11orf21Q9P2W6 132 aa7.16□□□□□ -1.26
CPSF4-212ENST00000482251 PSG8Q9UQ74 426 aa7.16□□□□□ -1.26
CPSF4-212ENST00000482251 TNFRSF18Q9Y5U5 241 aa7.16□□□□□ -1.26
CPSF4-212ENST00000482251 HSPG2P98160 4391 aa7.16□□□□□ -1.26
CPSF4-212ENST00000482251 LRP1BQ9NZR2 4599 aa7.15□□□□□ -1.26
CPSF4-212ENST00000482251 IGHV3-73A0A0B4J1V6 119 aa7.15□□□□□ -1.26
CPSF4-212ENST00000482251 SERTM2A0A1B0GWG4 89 aa7.15□□□□□ -1.26
CPSF4-212ENST00000482251 IGLV2-11P01706 119 aa7.15□□□□□ -1.26
CPSF4-212ENST00000482251 RGS21Q2M5E4 152 aa7.15□□□□□ -1.26
CPSF4-212ENST00000482251 ZFP69Q49AA0 526 aa7.15□□□□□ -1.26
CPSF4-212ENST00000482251 ARL6IP6Q8N6S5 226 aa7.15□□□□□ -1.26
CPSF4-212ENST00000482251 SUN5Q8TC36 379 aa7.15□□□□□ -1.26
CPSF4-212ENST00000482251 KCNS1Q96KK3 526 aa7.15□□□□□ -1.26
CPSF4-212ENST00000482251 LINC00479Q96M42 142 aa7.15□□□□□ -1.26
CPSF4-212ENST00000482251 EPDR1Q9UM22 224 aa7.15□□□□□ -1.26
CPSF4-212ENST00000482251 CTXND1A0A1B0GTU2 59 aa7.14□□□□□ -1.27
CPSF4-212ENST00000482251 IFNA7P01567 189 aa7.14□□□□□ -1.27
CPSF4-212ENST00000482251 PFN1P07737 140 aaKnown RBP7.14□□□□□ -1.27
CPSF4-212ENST00000482251 SMUG1Q53HV7 270 aa7.14□□□□□ -1.27
CPSF4-212ENST00000482251 AKR1C8PQ5T2L2 129 aa7.14□□□□□ -1.27
CPSF4-212ENST00000482251 DPPA3Q6W0C5 159 aa7.14□□□□□ -1.27
CPSF4-212ENST00000482251 Q6ZRN7 208 aaPredicted RBP7.14□□□□□ -1.27
CPSF4-212ENST00000482251 NHLRC2Q8NBF2 726 aa7.14□□□□□ -1.27
CPSF4-212ENST00000482251 KRTAP4-5Q9BYR2 181 aa7.14□□□□□ -1.27
CPSF4-212ENST00000482251 ARL2-SNX15V9GYD0 113 aa7.14□□□□□ -1.27
CPSF4-212ENST00000482251 FBLL1A6NHQ2 334 aaKnown RBP7.13□□□□□ -1.27
CPSF4-212ENST00000482251 ORM1P02763 201 aa7.13□□□□□ -1.27
CPSF4-212ENST00000482251 DNAH10OSP0CZ25 163 aa7.13□□□□□ -1.27
CPSF4-212ENST00000482251 PPT1P50897 306 aa7.13□□□□□ -1.27
CPSF4-212ENST00000482251 ZNF876PQ49A33 203 aa7.13□□□□□ -1.27
CPSF4-212ENST00000482251 Q86TA4 180 aa7.13□□□□□ -1.27
CPSF4-212ENST00000482251 TXNDC17Q9BRA2 123 aa7.13□□□□□ -1.27
CPSF4-212ENST00000482251 LY96Q9Y6Y9 160 aa7.13□□□□□ -1.27
CPSF4-212ENST00000482251 A0A1W2PRE2 83 aa7.12□□□□□ -1.27
CPSF4-212ENST00000482251 MAP1LC3B2A6NCE7 125 aa7.12□□□□□ -1.27
CPSF4-212ENST00000482251 PEX7O00628 323 aa7.12□□□□□ -1.27
CPSF4-212ENST00000482251 TAAR5O14804 337 aa7.12□□□□□ -1.27
CPSF4-212ENST00000482251 RNASE3P12724 160 aaKnown RBP7.12□□□□□ -1.27
CPSF4-212ENST00000482251 GATA1P15976 413 aaPredicted RBP7.12□□□□□ -1.27
CPSF4-212ENST00000482251 ZNF506Q5JVG8 444 aa7.12□□□□□ -1.27
CPSF4-212ENST00000482251 CFAP126Q5VTH2 177 aa7.12□□□□□ -1.27
CPSF4-212ENST00000482251 C9orf85Q96MD7 179 aa7.12□□□□□ -1.27
CPSF4-212ENST00000482251 MAP1LC3BQ9GZQ8 125 aa7.12□□□□□ -1.27
CPSF4-212ENST00000482251 ABCA13Q86UQ4 5058 aa7.11□□□□□ -1.27
CPSF4-212ENST00000482251 A0A1B0GV50 99 aa7.11□□□□□ -1.27
CPSF4-212ENST00000482251 PGPEP1LA6NFU8 196 aa7.11□□□□□ -1.27
CPSF4-212ENST00000482251 FAM74A7A6NL05 159 aa7.11□□□□□ -1.27
CPSF4-212ENST00000482251 BTF3P20290 206 aaKnown RBP7.11□□□□□ -1.27
CPSF4-212ENST00000482251 FHITP49789 147 aa7.11□□□□□ -1.27
CPSF4-212ENST00000482251 MAPKAPK5-AS1Q8N8E1 139 aa7.11□□□□□ -1.27
CPSF4-212ENST00000482251 SLC25A29Q8N8R3 303 aa7.11□□□□□ -1.27
CPSF4-212ENST00000482251 CYTL1Q9NRR1 136 aa7.11□□□□□ -1.27
CPSF4-212ENST00000482251 APOBP04114 4563 aaKnown RBP7.1□□□□□ -1.27
CPSF4-212ENST00000482251 IGKV3D-20A0A0C4DH25 116 aa7.1□□□□□ -1.27
CPSF4-212ENST00000482251 H3BVH4 76 aa7.1□□□□□ -1.27
CPSF4-212ENST00000482251 M0R036 132 aa7.1□□□□□ -1.27
CPSF4-212ENST00000482251 RS1O15537 224 aa7.1□□□□□ -1.27
CPSF4-212ENST00000482251 CDK2AP2O75956 126 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 130.2 ms