RNA–Protein interactions for RNA: ENST00000479712.1

UPF3A-205, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2

Gene UPF3A, Length 423 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-205ENST00000479712 NAP1L6A6NFF2 107 aa3.18□□□□□ -1.9
UPF3A-205ENST00000479712 C2orf70A6NJV1 201 aa3.18□□□□□ -1.9
UPF3A-205ENST00000479712 I3L2K1 104 aa3.18□□□□□ -1.9
UPF3A-205ENST00000479712 K7EIM0 57 aa3.18□□□□□ -1.9
UPF3A-205ENST00000479712 NDUFA4O00483 81 aa3.18□□□□□ -1.9
UPF3A-205ENST00000479712 TGOLN2O43493 480 aa3.18□□□□□ -1.9
UPF3A-205ENST00000479712 IGKV1-5P01602 117 aa3.18□□□□□ -1.9
UPF3A-205ENST00000479712 PRH1P02810 166 aa3.18□□□□□ -1.9
UPF3A-205ENST00000479712 CD5P06127 495 aa3.18□□□□□ -1.9
UPF3A-205ENST00000479712 APELAP0DMC3 54 aa3.18□□□□□ -1.9
UPF3A-205ENST00000479712 SLC25A6P12236 298 aa3.18□□□□□ -1.9
UPF3A-205ENST00000479712 AKR1C2P52895 323 aa3.18□□□□□ -1.9
UPF3A-205ENST00000479712 SPCS3P61009 180 aa3.18□□□□□ -1.9
UPF3A-205ENST00000479712 ERHP84090 104 aaKnown RBP3.18□□□□□ -1.9
UPF3A-205ENST00000479712 DEFB114Q30KQ6 69 aa3.18□□□□□ -1.9
UPF3A-205ENST00000479712 BSXQ3C1V8 233 aa3.18□□□□□ -1.9
UPF3A-205ENST00000479712 SCGB2B2Q4G0G5 96 aa3.18□□□□□ -1.9
UPF3A-205ENST00000479712 Q5W150 140 aa3.18□□□□□ -1.9
UPF3A-205ENST00000479712 CLEC19AQ6UXS0 136 aa3.18□□□□□ -1.9
UPF3A-205ENST00000479712 LINC00322Q6ZN03 302 aaPredicted RBP3.18□□□□□ -1.9
UPF3A-205ENST00000479712 TOMM5Q8N4H5 51 aa3.18□□□□□ -1.9
UPF3A-205ENST00000479712 RXFP4Q8TDU9 374 aa3.18□□□□□ -1.9
UPF3A-205ENST00000479712 TP53RKQ96S44 253 aa3.18□□□□□ -1.9
UPF3A-205ENST00000479712 C7orf50Q9BRJ6 194 aaKnown RBP3.18□□□□□ -1.9
UPF3A-205ENST00000479712 PDCD10Q9BUL8 212 aa3.18□□□□□ -1.9
UPF3A-205ENST00000479712 GGTLC1Q9BX51 225 aa3.18□□□□□ -1.9
UPF3A-205ENST00000479712 CTNNBIP1Q9NSA3 81 aaPredicted RBP3.18□□□□□ -1.9
UPF3A-205ENST00000479712 C21orf62Q9NYP8 219 aa3.18□□□□□ -1.9
UPF3A-205ENST00000479712 MRPL27Q9P0M9 148 aaKnown RBP3.18□□□□□ -1.9
UPF3A-205ENST00000479712 UFC1Q9Y3C8 167 aa3.18□□□□□ -1.9
UPF3A-205ENST00000479712 V9GYH0 126 aa3.18□□□□□ -1.9
UPF3A-205ENST00000479712 NACAE9PAV3 2078 aa3.18□□□□□ -1.9
UPF3A-205ENST00000479712 TMEM213A2RRL7 107 aa3.17□□□□□ -1.9
UPF3A-205ENST00000479712 CCDC160A6NGH7 325 aa3.17□□□□□ -1.9
UPF3A-205ENST00000479712 PPP5D1E7EU14 171 aa3.17□□□□□ -1.9
UPF3A-205ENST00000479712 TAAR5O14804 337 aa3.17□□□□□ -1.9
UPF3A-205ENST00000479712 ZNF207O43670 478 aaKnown RBP3.17□□□□□ -1.9
UPF3A-205ENST00000479712 ZNF324O75467 553 aaPredicted RBP3.17□□□□□ -1.9
UPF3A-205ENST00000479712 IFNA4P05014 189 aa3.17□□□□□ -1.9
UPF3A-205ENST00000479712 REG1AP05451 166 aa3.17□□□□□ -1.9
UPF3A-205ENST00000479712 CTSGP08311 255 aa3.17□□□□□ -1.9
UPF3A-205ENST00000479712 OR5AC1P0C628 307 aa3.17□□□□□ -1.9
UPF3A-205ENST00000479712 ZNF688P0C7X2 276 aa3.17□□□□□ -1.9
UPF3A-205ENST00000479712 CBLN1P23435 193 aa3.17□□□□□ -1.9
UPF3A-205ENST00000479712 SNCAP37840 140 aa3.17□□□□□ -1.9
UPF3A-205ENST00000479712 HTR2BP41595 481 aa3.17□□□□□ -1.9
UPF3A-205ENST00000479712 CMC4P56277 68 aaPredicted RBP3.17□□□□□ -1.9
UPF3A-205ENST00000479712 DEFA5Q01523 94 aa3.17□□□□□ -1.9
UPF3A-205ENST00000479712 IFITM3Q01628 133 aa3.17□□□□□ -1.9
UPF3A-205ENST00000479712 RPL18AQ02543 176 aaKnown RBP3.17□□□□□ -1.9
UPF3A-205ENST00000479712 ATP6V1FQ16864 119 aa3.17□□□□□ -1.9
UPF3A-205ENST00000479712 LINC00483Q53H64 154 aa3.17□□□□□ -1.9
UPF3A-205ENST00000479712 TMEM128Q5BJH2 165 aa3.17□□□□□ -1.9
UPF3A-205ENST00000479712 SELENOHQ8IZQ5 122 aaKnown RBP3.17□□□□□ -1.9
UPF3A-205ENST00000479712 SLC35G3Q8N808 338 aa3.17□□□□□ -1.9
UPF3A-205ENST00000479712 RNASEH2CQ8TDP1 164 aaKnown RBP3.17□□□□□ -1.9
UPF3A-205ENST00000479712 OR10C1Q96KK4 312 aa3.17□□□□□ -1.9
UPF3A-205ENST00000479712 RSG1Q9BU20 258 aa3.17□□□□□ -1.9
UPF3A-205ENST00000479712 HINT2Q9BX68 163 aa3.17□□□□□ -1.9
UPF3A-205ENST00000479712 SRRQ9GZT4 340 aa3.17□□□□□ -1.9
UPF3A-205ENST00000479712 ENY2Q9NPA8 101 aa3.17□□□□□ -1.9
UPF3A-205ENST00000479712 DAZ1Q9NQZ3 744 aaKnown RBP3.17□□□□□ -1.9
UPF3A-205ENST00000479712 TRAV30A0A087WSZ9 112 aa3.16□□□□□ -1.9
UPF3A-205ENST00000479712 TRAV2A0A0B4J234 112 aa3.16□□□□□ -1.9
UPF3A-205ENST00000479712 MT-CO2P00403 227 aa3.16□□□□□ -1.9
UPF3A-205ENST00000479712 IFNA17P01571 189 aa3.16□□□□□ -1.9
UPF3A-205ENST00000479712 HLA-DQA1P01909 254 aa3.16□□□□□ -1.9
UPF3A-205ENST00000479712 SULT1A3P0DMM9 295 aa3.16□□□□□ -1.9
UPF3A-205ENST00000479712 SULT1A4P0DMN0 295 aa3.16□□□□□ -1.9
UPF3A-205ENST00000479712 RNASE2P10153 161 aaKnown RBP3.16□□□□□ -1.9
UPF3A-205ENST00000479712 SLC25A4P12235 298 aa3.16□□□□□ -1.9
UPF3A-205ENST00000479712 TCTAP57738 103 aa3.16□□□□□ -1.9
UPF3A-205ENST00000479712 SUPT4H1P63272 117 aaKnown RBP3.16□□□□□ -1.9
UPF3A-205ENST00000479712 SP6Q3SY56 376 aa3.16□□□□□ -1.9
UPF3A-205ENST00000479712 PYDC2Q56P42 97 aa3.16□□□□□ -1.9
UPF3A-205ENST00000479712 NMSQ5H8A3 153 aa3.16□□□□□ -1.9
UPF3A-205ENST00000479712 LAMTOR1Q6IAA8 161 aa3.16□□□□□ -1.9
UPF3A-205ENST00000479712 TMEM256Q8N2U0 113 aa3.16□□□□□ -1.9
UPF3A-205ENST00000479712 OR4X1Q8NH49 305 aa3.16□□□□□ -1.9
UPF3A-205ENST00000479712 RNASE11Q8TAA1 199 aaKnown RBP3.16□□□□□ -1.9
UPF3A-205ENST00000479712 LHFPL5Q8TAF8 219 aa3.16□□□□□ -1.9
UPF3A-205ENST00000479712 DYNLRB2Q8TF09 96 aa3.16□□□□□ -1.9
UPF3A-205ENST00000479712 GPR146Q96CH1 333 aa3.16□□□□□ -1.9
UPF3A-205ENST00000479712 KCNS1Q96KK3 526 aa3.16□□□□□ -1.9
UPF3A-205ENST00000479712 GINS3Q9BRX5 216 aa3.16□□□□□ -1.9
UPF3A-205ENST00000479712 WFDC10AQ9H1F0 79 aa3.16□□□□□ -1.9
UPF3A-205ENST00000479712 U3KQ87 197 aa3.16□□□□□ -1.9
UPF3A-205ENST00000479712 OR2T8A6NH00 312 aa3.15□□□□□ -1.91
UPF3A-205ENST00000479712 OR4C46A6NHA9 309 aa3.15□□□□□ -1.91
UPF3A-205ENST00000479712 GNG7O60262 68 aa3.15□□□□□ -1.91
UPF3A-205ENST00000479712 PITX3O75364 302 aa3.15□□□□□ -1.91
UPF3A-205ENST00000479712 UPK1BO75841 260 aa3.15□□□□□ -1.91
UPF3A-205ENST00000479712 NDUFB6O95139 128 aa3.15□□□□□ -1.91
UPF3A-205ENST00000479712 SFT2D2O95562 160 aa3.15□□□□□ -1.91
UPF3A-205ENST00000479712 PTTG1O95997 202 aa3.15□□□□□ -1.91
UPF3A-205ENST00000479712 AKR1C4P17516 323 aa3.15□□□□□ -1.91
UPF3A-205ENST00000479712 OPRK1P41145 380 aa3.15□□□□□ -1.91
UPF3A-205ENST00000479712 YPEL3P61236 119 aaPredicted RBP3.15□□□□□ -1.91
UPF3A-205ENST00000479712 SMCO1Q147U7 214 aa3.15□□□□□ -1.91
UPF3A-205ENST00000479712 Q56UQ5 140 aa3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms