RNA–Protein interactions for RNA: ENST00000478746.1

VIM-204, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 757 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-204ENST00000478746 FAM24AA6NFZ4 105 aa11.37□□□□□ -0.59
VIM-204ENST00000478746 H0YIZ8 118 aa11.37□□□□□ -0.59
VIM-204ENST00000478746 PYYP10082 97 aa11.37□□□□□ -0.59
VIM-204ENST00000478746 BAXQ07812 192 aa11.37□□□□□ -0.59
VIM-204ENST00000478746 WFDC2Q14508 124 aa11.37□□□□□ -0.59
VIM-204ENST00000478746 OR10J3Q5JRS4 329 aa11.37□□□□□ -0.59
VIM-204ENST00000478746 FAM122CQ6P4D5 195 aa11.37□□□□□ -0.59
VIM-204ENST00000478746 SCXQ7RTU7 201 aa11.37□□□□□ -0.59
VIM-204ENST00000478746 UBE2L5PA0A1B0GUS4 154 aa11.36□□□□□ -0.59
VIM-204ENST00000478746 A0A1B0GVG6 124 aa11.36□□□□□ -0.59
VIM-204ENST00000478746 ZNF138P52744 262 aa11.36□□□□□ -0.59
VIM-204ENST00000478746 KRTAP10-4P60372 401 aaPredicted RBP11.36□□□□□ -0.59
VIM-204ENST00000478746 TMEM183BQ1AE95 376 aa11.36□□□□□ -0.59
VIM-204ENST00000478746 VWC2Q2TAL6 325 aa11.36□□□□□ -0.59
VIM-204ENST00000478746 TDRG1Q3Y452 100 aa11.36□□□□□ -0.59
VIM-204ENST00000478746 STX12Q86Y82 276 aa11.36□□□□□ -0.59
VIM-204ENST00000478746 TMEM183AQ8IXX5 376 aa11.36□□□□□ -0.59
VIM-204ENST00000478746 IGSF23A1L1A6 192 aa11.35□□□□□ -0.59
VIM-204ENST00000478746 PFN1P07737 140 aaKnown RBP11.35□□□□□ -0.59
VIM-204ENST00000478746 S100A11P31949 105 aa11.35□□□□□ -0.59
VIM-204ENST00000478746 TMEM252Q8N6L7 170 aa11.35□□□□□ -0.59
VIM-204ENST00000478746 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.34□□□□□ -0.59
VIM-204ENST00000478746 TRBV7-9A0A0J9YWB2 115 aa11.34□□□□□ -0.59
VIM-204ENST00000478746 LECT2O14960 151 aa11.34□□□□□ -0.59
VIM-204ENST00000478746 SULT1A1P50225 295 aa11.34□□□□□ -0.59
VIM-204ENST00000478746 FAM159AQ6UWV7 190 aa11.34□□□□□ -0.59
VIM-204ENST00000478746 Q8TAT8 98 aa11.34□□□□□ -0.59
VIM-204ENST00000478746 TRGV11A0A075B6L2 103 aa11.33□□□□□ -0.6
VIM-204ENST00000478746 FXYD6-FXYD2A0A087WZ82 144 aa11.33□□□□□ -0.6
VIM-204ENST00000478746 IGHV3-16A0A0C4DH30 117 aa11.33□□□□□ -0.6
VIM-204ENST00000478746 FGF7P21781 194 aa11.33□□□□□ -0.6
VIM-204ENST00000478746 HBG1P69891 147 aa11.33□□□□□ -0.6
VIM-204ENST00000478746 HBG2P69892 147 aa11.33□□□□□ -0.6
VIM-204ENST00000478746 ZNF266Q14584 549 aa11.33□□□□□ -0.6
VIM-204ENST00000478746 LAGE3Q14657 143 aa11.33□□□□□ -0.6
VIM-204ENST00000478746 LINC01620Q4KN68 170 aa11.33□□□□□ -0.6
VIM-204ENST00000478746 Q5BKY6 102 aa11.33□□□□□ -0.6
VIM-204ENST00000478746 AKAP14Q86UN6 197 aa11.33□□□□□ -0.6
VIM-204ENST00000478746 SMLR1H3BR10 107 aa11.32□□□□□ -0.6
VIM-204ENST00000478746 M0R2P5 195 aa11.32□□□□□ -0.6
VIM-204ENST00000478746 NBEAP1P0C6P0 100 aa11.32□□□□□ -0.6
VIM-204ENST00000478746 GATA1P15976 413 aaPredicted RBP11.32□□□□□ -0.6
VIM-204ENST00000478746 RPL12P30050 165 aaKnown RBP11.32□□□□□ -0.6
VIM-204ENST00000478746 CHAC1Q9BUX1 264 aa11.32□□□□□ -0.6
VIM-204ENST00000478746 SLC25A2Q9BXI2 301 aa11.32□□□□□ -0.6
VIM-204ENST00000478746 NHLH2Q02577 135 aa11.31□□□□□ -0.6
VIM-204ENST00000478746 ATP6V1FQ16864 119 aa11.31□□□□□ -0.6
VIM-204ENST00000478746 GCSAMLQ5JQS6 135 aa11.31□□□□□ -0.6
VIM-204ENST00000478746 LELP1Q5T871 98 aa11.31□□□□□ -0.6
VIM-204ENST00000478746 INO80EQ8NBZ0 244 aaPredicted RBP11.31□□□□□ -0.6
VIM-204ENST00000478746 HSPB11Q9Y547 144 aa11.31□□□□□ -0.6
VIM-204ENST00000478746 RBFOX3A6NFN3 312 aa11.3□□□□□ -0.6
VIM-204ENST00000478746 G3V3Q6 166 aa11.3□□□□□ -0.6
VIM-204ENST00000478746 Q6AWC8 147 aa11.3□□□□□ -0.6
VIM-204ENST00000478746 FAM167A-AS1Q96KT0 104 aa11.3□□□□□ -0.6
VIM-204ENST00000478746 OR51M1Q9H341 326 aa11.3□□□□□ -0.6
VIM-204ENST00000478746 TRAV8-3A0A0A6YYJ7 113 aa11.29□□□□□ -0.6
VIM-204ENST00000478746 GNRH2O43555 120 aa11.29□□□□□ -0.6
VIM-204ENST00000478746 CSN1S1P47710 185 aa11.29□□□□□ -0.6
VIM-204ENST00000478746 MIR17HGQ75NE6 70 aa11.29□□□□□ -0.6
VIM-204ENST00000478746 TCTE3Q8IZS6 198 aa11.29□□□□□ -0.6
VIM-204ENST00000478746 SLC25A29Q8N8R3 303 aa11.29□□□□□ -0.6
VIM-204ENST00000478746 OR5C1Q8NGR4 320 aa11.29□□□□□ -0.6
VIM-204ENST00000478746 CIRBP-AS1Q8TBR5 109 aa11.29□□□□□ -0.6
VIM-204ENST00000478746 PRADC1Q9BSG0 188 aa11.29□□□□□ -0.6
VIM-204ENST00000478746 NPCDR1Q9BY65 106 aa11.29□□□□□ -0.6
VIM-204ENST00000478746 NAGKQ9UJ70 344 aa11.29□□□□□ -0.6
VIM-204ENST00000478746 PKHD1L1Q86WI1 4243 aa11.28□□□□□ -0.6
VIM-204ENST00000478746 RBAKDNA6NC62 111 aa11.28□□□□□ -0.6
VIM-204ENST00000478746 ARPC5O15511 151 aa11.28□□□□□ -0.6
VIM-204ENST00000478746 ACOT6Q3I5F7 207 aaPredicted RBP11.28□□□□□ -0.6
VIM-204ENST00000478746 BAALCQ8WXS3 180 aa11.28□□□□□ -0.6
VIM-204ENST00000478746 AQP10Q96PS8 301 aa11.28□□□□□ -0.6
VIM-204ENST00000478746 TNFSF18Q9UNG2 199 aa11.28□□□□□ -0.6
VIM-204ENST00000478746 FBLL1A6NHQ2 334 aaKnown RBP11.27□□□□□ -0.61
VIM-204ENST00000478746 RS1O15537 224 aa11.27□□□□□ -0.61
VIM-204ENST00000478746 OR10J4P0C629 311 aa11.27□□□□□ -0.61
VIM-204ENST00000478746 PHYHIPLQ96FC7 376 aa11.27□□□□□ -0.61
VIM-204ENST00000478746 PAXXQ9BUH6 204 aa11.27□□□□□ -0.61
VIM-204ENST00000478746 SMIM3Q9BZL3 60 aa11.27□□□□□ -0.61
VIM-204ENST00000478746 GTSF1LQ9H1H1 148 aa11.27□□□□□ -0.61
VIM-204ENST00000478746 IGLV2-8P01709 118 aa11.26□□□□□ -0.61
VIM-204ENST00000478746 Q8N976 141 aa11.26□□□□□ -0.61
VIM-204ENST00000478746 ATP6V0E2Q8NHE4 81 aa11.26□□□□□ -0.61
VIM-204ENST00000478746 FXYD5Q96DB9 178 aa11.26□□□□□ -0.61
VIM-204ENST00000478746 ATP5SQ99766 215 aa11.26□□□□□ -0.61
VIM-204ENST00000478746 LENEPQ9Y5L5 61 aa11.26□□□□□ -0.61
VIM-204ENST00000478746 COX11Q9Y6N1 276 aa11.26□□□□□ -0.61
VIM-204ENST00000478746 TRBV6-4A0A1B0GX49 114 aa11.25□□□□□ -0.61
VIM-204ENST00000478746 RNF222A6NCQ9 220 aa11.25□□□□□ -0.61
VIM-204ENST00000478746 HMSDA8MTL9 139 aa11.25□□□□□ -0.61
VIM-204ENST00000478746 RHOHQ15669 191 aa11.25□□□□□ -0.61
VIM-204ENST00000478746 TOR2AQ5JU69 321 aa11.25□□□□□ -0.61
VIM-204ENST00000478746 Q8N3U1 123 aa11.25□□□□□ -0.61
VIM-204ENST00000478746 OR11H4Q8NGC9 324 aa11.25□□□□□ -0.61
VIM-204ENST00000478746 CIDEAO60543 219 aa11.24□□□□□ -0.61
VIM-204ENST00000478746 RANP62826 216 aaKnown RBP11.24□□□□□ -0.61
VIM-204ENST00000478746 DAZ4Q86SG3 579 aaKnown RBP11.24□□□□□ -0.61
VIM-204ENST00000478746 DAZ3Q9NR90 486 aaKnown RBP11.24□□□□□ -0.61
VIM-204ENST00000478746 GGTLC3B5MD39 225 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms