RNA–Protein interactions for RNA: ENST00000476930.1

PTPRN-213, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

TSL 3

Gene PTPRN, Length 582 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-213ENST00000476930 ZNF479Q96JC4 524 aa7.67□□□□□ -1.18
PTPRN-213ENST00000476930 PRO0255Q9UI72 69 aa7.67□□□□□ -1.18
PTPRN-213ENST00000476930 ICOSQ9Y6W8 199 aa7.67□□□□□ -1.18
PTPRN-213ENST00000476930 TRAV21A0A0B4J279 112 aa7.66□□□□□ -1.18
PTPRN-213ENST00000476930 IGHV3-16A0A0C4DH30 117 aa7.66□□□□□ -1.18
PTPRN-213ENST00000476930 G3V3Q6 166 aa7.66□□□□□ -1.18
PTPRN-213ENST00000476930 MBP02144 154 aa7.66□□□□□ -1.18
PTPRN-213ENST00000476930 TCRAP04437 139 aa7.66□□□□□ -1.18
PTPRN-213ENST00000476930 TYMSP04818 313 aa7.66□□□□□ -1.18
PTPRN-213ENST00000476930 ZNF80P51504 273 aaPredicted RBP7.66□□□□□ -1.18
PTPRN-213ENST00000476930 INO80EQ8NBZ0 244 aaPredicted RBP7.66□□□□□ -1.18
PTPRN-213ENST00000476930 SPXQ9BT56 116 aa7.66□□□□□ -1.18
PTPRN-213ENST00000476930 TNFSF18Q9UNG2 199 aa7.66□□□□□ -1.18
PTPRN-213ENST00000476930 TRGV4A0A0C4DH28 118 aa7.65□□□□□ -1.18
PTPRN-213ENST00000476930 GGTLC3B5MD39 225 aa7.65□□□□□ -1.18
PTPRN-213ENST00000476930 IGLV2-11P01706 119 aa7.65□□□□□ -1.18
PTPRN-213ENST00000476930 SUMO1P63165 101 aaKnown RBP7.65□□□□□ -1.18
PTPRN-213ENST00000476930 SLAQ13239 276 aa7.65□□□□□ -1.18
PTPRN-213ENST00000476930 ZNF726P1Q15940 193 aa7.65□□□□□ -1.18
PTPRN-213ENST00000476930 TTC32Q5I0X7 151 aa7.65□□□□□ -1.18
PTPRN-213ENST00000476930 LYPD5Q6UWN5 251 aa7.65□□□□□ -1.18
PTPRN-213ENST00000476930 C5orf17Q8NAS9 161 aa7.65□□□□□ -1.18
PTPRN-213ENST00000476930 OR2T35Q8NGX2 323 aa7.65□□□□□ -1.18
PTPRN-213ENST00000476930 ASB13Q8WXK3 278 aa7.65□□□□□ -1.18
PTPRN-213ENST00000476930 ACTR3CQ9C0K3 210 aaPredicted RBP7.65□□□□□ -1.18
PTPRN-213ENST00000476930 C11orf21Q9P2W6 132 aa7.65□□□□□ -1.18
PTPRN-213ENST00000476930 PSG8Q9UQ74 426 aa7.65□□□□□ -1.18
PTPRN-213ENST00000476930 A0A1W2PPQ1 181 aa7.64□□□□□ -1.19
PTPRN-213ENST00000476930 K7EQD1 137 aa7.64□□□□□ -1.19
PTPRN-213ENST00000476930 M0R2P5 195 aa7.64□□□□□ -1.19
PTPRN-213ENST00000476930 SIVA1O15304 175 aa7.64□□□□□ -1.19
PTPRN-213ENST00000476930 NXPH4O95158 308 aa7.64□□□□□ -1.19
PTPRN-213ENST00000476930 CXorf1O96002 111 aa7.64□□□□□ -1.19
PTPRN-213ENST00000476930 MRPL23Q16540 153 aaKnown RBP7.64□□□□□ -1.19
PTPRN-213ENST00000476930 IQCF2Q8IXL9 164 aa7.64□□□□□ -1.19
PTPRN-213ENST00000476930 LINC00528Q8N1L1 170 aa7.64□□□□□ -1.19
PTPRN-213ENST00000476930 TMEM167BQ9NRX6 74 aa7.64□□□□□ -1.19
PTPRN-213ENST00000476930 EPDR1Q9UM22 224 aa7.64□□□□□ -1.19
PTPRN-213ENST00000476930 BORCS7-ASMTA0A0B4J1R7 106 aa7.63□□□□□ -1.19
PTPRN-213ENST00000476930 TRAV4A0A0B4J268 109 aa7.63□□□□□ -1.19
PTPRN-213ENST00000476930 SERTM2A0A1B0GWG4 89 aa7.63□□□□□ -1.19
PTPRN-213ENST00000476930 C16orf90A8MZG2 172 aa7.63□□□□□ -1.19
PTPRN-213ENST00000476930 GCGP01275 180 aa7.63□□□□□ -1.19
PTPRN-213ENST00000476930 GYPEP15421 78 aa7.63□□□□□ -1.19
PTPRN-213ENST00000476930 LINC00315P59091 139 aa7.63□□□□□ -1.19
PTPRN-213ENST00000476930 RGS21Q2M5E4 152 aa7.63□□□□□ -1.19
PTPRN-213ENST00000476930 PRNTQ86SH4 94 aa7.63□□□□□ -1.19
PTPRN-213ENST00000476930 TMEM75Q8N9X5 138 aa7.63□□□□□ -1.19
PTPRN-213ENST00000476930 OR4C5Q8NGB2 326 aa7.63□□□□□ -1.19
PTPRN-213ENST00000476930 KCNS1Q96KK3 526 aa7.63□□□□□ -1.19
PTPRN-213ENST00000476930 LINC00479Q96M42 142 aa7.63□□□□□ -1.19
PTPRN-213ENST00000476930 NDFIP1Q9BT67 221 aa7.63□□□□□ -1.19
PTPRN-213ENST00000476930 SDF2L1Q9HCN8 221 aa7.63□□□□□ -1.19
PTPRN-213ENST00000476930 DNAH8Q96JB1 4490 aa7.62□□□□□ -1.19
PTPRN-213ENST00000476930 FAT1Q14517 4588 aa7.62□□□□□ -1.19
PTPRN-213ENST00000476930 TRAV34A0A0B4J273 112 aa7.62□□□□□ -1.19
PTPRN-213ENST00000476930 LOC100131303A0A0U1RQF7 123 aa7.62□□□□□ -1.19
PTPRN-213ENST00000476930 SMLR1H3BR10 107 aa7.62□□□□□ -1.19
PTPRN-213ENST00000476930 FGF8P55075 233 aaPredicted RBP7.62□□□□□ -1.19
PTPRN-213ENST00000476930 UBE2G2P60604 165 aa7.62□□□□□ -1.19
PTPRN-213ENST00000476930 FLI1Q01543 452 aaPredicted RBP7.62□□□□□ -1.19
PTPRN-213ENST00000476930 NEGR1Q7Z3B1 354 aa7.62□□□□□ -1.19
PTPRN-213ENST00000476930 SPATA12Q7Z6I5 190 aa7.62□□□□□ -1.19
PTPRN-213ENST00000476930 CYB561D1Q8N8Q1 229 aa7.62□□□□□ -1.19
PTPRN-213ENST00000476930 CYTL1Q9NRR1 136 aa7.62□□□□□ -1.19
PTPRN-213ENST00000476930 TNFRSF18Q9Y5U5 241 aa7.62□□□□□ -1.19
PTPRN-213ENST00000476930 CTXND1A0A1B0GTU2 59 aa7.61□□□□□ -1.19
PTPRN-213ENST00000476930 A0A1W2PRE2 83 aa7.61□□□□□ -1.19
PTPRN-213ENST00000476930 C9JCJ5 164 aa7.61□□□□□ -1.19
PTPRN-213ENST00000476930 K7EQM0 130 aa7.61□□□□□ -1.19
PTPRN-213ENST00000476930 ARPC5O15511 151 aa7.61□□□□□ -1.19
PTPRN-213ENST00000476930 SRIP30626 198 aa7.61□□□□□ -1.19
PTPRN-213ENST00000476930 SMUG1Q53HV7 270 aa7.61□□□□□ -1.19
PTPRN-213ENST00000476930 DPPA3Q6W0C5 159 aa7.61□□□□□ -1.19
PTPRN-213ENST00000476930 Q6ZRN7 208 aaPredicted RBP7.61□□□□□ -1.19
PTPRN-213ENST00000476930 TAAR5O14804 337 aa7.6□□□□□ -1.19
PTPRN-213ENST00000476930 PFN1P07737 140 aaKnown RBP7.6□□□□□ -1.19
PTPRN-213ENST00000476930 KRTAP10-2P60368 255 aa7.6□□□□□ -1.19
PTPRN-213ENST00000476930 ZNF876PQ49A33 203 aa7.6□□□□□ -1.19
PTPRN-213ENST00000476930 WFDC10BQ8IUB3 73 aa7.6□□□□□ -1.19
PTPRN-213ENST00000476930 PCNPQ8WW12 178 aaKnown RBP7.6□□□□□ -1.19
PTPRN-213ENST00000476930 PGPEP1LA6NFU8 196 aa7.59□□□□□ -1.19
PTPRN-213ENST00000476930 FAM74A7A6NL05 159 aa7.59□□□□□ -1.19
PTPRN-213ENST00000476930 IFNA7P01567 189 aa7.59□□□□□ -1.19
PTPRN-213ENST00000476930 ORM1P02763 201 aa7.59□□□□□ -1.19
PTPRN-213ENST00000476930 RNASE3P12724 160 aaKnown RBP7.59□□□□□ -1.19
PTPRN-213ENST00000476930 GATA1P15976 413 aaPredicted RBP7.59□□□□□ -1.19
PTPRN-213ENST00000476930 BTF3P20290 206 aaKnown RBP7.59□□□□□ -1.19
PTPRN-213ENST00000476930 ZFP69Q49AA0 526 aa7.59□□□□□ -1.19
PTPRN-213ENST00000476930 AKR1C8PQ5T2L2 129 aa7.59□□□□□ -1.19
PTPRN-213ENST00000476930 C9orf85Q96MD7 179 aa7.59□□□□□ -1.19
PTPRN-213ENST00000476930 KRTAP4-5Q9BYR2 181 aa7.59□□□□□ -1.19
PTPRN-213ENST00000476930 ARL2-SNX15V9GYD0 113 aa7.59□□□□□ -1.19
PTPRN-213ENST00000476930 IGHV3-73A0A0B4J1V6 119 aa7.58□□□□□ -1.2
PTPRN-213ENST00000476930 IGKV3D-20A0A0C4DH25 116 aa7.58□□□□□ -1.2
PTPRN-213ENST00000476930 FBLL1A6NHQ2 334 aaKnown RBP7.58□□□□□ -1.2
PTPRN-213ENST00000476930 PEX7O00628 323 aa7.58□□□□□ -1.2
PTPRN-213ENST00000476930 RS1O15537 224 aa7.58□□□□□ -1.2
PTPRN-213ENST00000476930 SMCPP49901 116 aaPredicted RBP7.58□□□□□ -1.2
PTPRN-213ENST00000476930 ZNF506Q5JVG8 444 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms