RNA–Protein interactions for RNA: ENST00000476379.5

CCDC39-204, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 4,451 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-204ENST00000476379 ATP5IP56385 69 aaPredicted RBP3.91□□□□□ -1.78
CCDC39-204ENST00000476379 Q0VG73 95 aa3.91□□□□□ -1.78
CCDC39-204ENST00000476379 H3BMG7 143 aa3.91□□□□□ -1.78
CCDC39-204ENST00000476379 J3QKU1 62 aa3.91□□□□□ -1.78
CCDC39-204ENST00000476379 RNASE1P07998 156 aaKnown RBP3.91□□□□□ -1.78
CCDC39-204ENST00000476379 C5orf64Q2M2E5 130 aa3.91□□□□□ -1.78
CCDC39-204ENST00000476379 TMEM155Q4W5P6 130 aa3.91□□□□□ -1.78
CCDC39-204ENST00000476379 ZNF436-AS1Q8NC38 126 aaPredicted RBP3.91□□□□□ -1.78
CCDC39-204ENST00000476379 JPT2Q9H910 190 aa3.91□□□□□ -1.78
CCDC39-204ENST00000476379 PEF1Q9UBV8 284 aaKnown RBP3.91□□□□□ -1.78
CCDC39-204ENST00000476379 TMEM8BA6NDV4 472 aa3.91□□□□□ -1.78
CCDC39-204ENST00000476379 H3BUX3 64 aa3.91□□□□□ -1.78
CCDC39-204ENST00000476379 TRBV12-3P01733 135 aa3.91□□□□□ -1.78
CCDC39-204ENST00000476379 IGHV4-39P01824 125 aa3.91□□□□□ -1.78
CCDC39-204ENST00000476379 ZNF80P51504 273 aaPredicted RBP3.91□□□□□ -1.78
CCDC39-204ENST00000476379 COX19Q49B96 90 aa3.91□□□□□ -1.78
CCDC39-204ENST00000476379 KLHL30-AS1Q8NEE0 82 aa3.91□□□□□ -1.78
CCDC39-204ENST00000476379 IGF2BP2-AS1Q96M15 143 aa3.91□□□□□ -1.78
CCDC39-204ENST00000476379 MRPL35Q9NZE8 188 aaKnown RBP3.91□□□□□ -1.78
CCDC39-204ENST00000476379 TRBV19A0A075B6N1 114 aa3.9□□□□□ -1.78
CCDC39-204ENST00000476379 IGHV3-38A0A0C4DH36 116 aa3.9□□□□□ -1.78
CCDC39-204ENST00000476379 OR11H12B2RN74 326 aa3.9□□□□□ -1.78
CCDC39-204ENST00000476379 GNRH2O43555 120 aa3.9□□□□□ -1.78
CCDC39-204ENST00000476379 BVES-AS1Q5T3Y7 98 aa3.9□□□□□ -1.78
CCDC39-204ENST00000476379 ZNF833PQ6ZTB9 187 aa3.9□□□□□ -1.78
CCDC39-204ENST00000476379 ZNF491Q8N8L2 437 aa3.9□□□□□ -1.78
CCDC39-204ENST00000476379 OR11H1Q8NG94 326 aa3.9□□□□□ -1.78
CCDC39-204ENST00000476379 OR11H2Q8NH07 326 aa3.9□□□□□ -1.78
CCDC39-204ENST00000476379 ORAOV1Q8WV07 137 aa3.9□□□□□ -1.78
CCDC39-204ENST00000476379 PHLDA1Q8WV24 401 aaPredicted RBP3.9□□□□□ -1.78
CCDC39-204ENST00000476379 C1orf43Q9BWL3 253 aa3.9□□□□□ -1.78
CCDC39-204ENST00000476379 C11orf68Q9H3H3 251 aaKnown RBP3.9□□□□□ -1.78
CCDC39-204ENST00000476379 TRAV2A0A0B4J234 112 aa3.9□□□□□ -1.79
CCDC39-204ENST00000476379 FABP5P3A8MUU1 101 aa3.9□□□□□ -1.79
CCDC39-204ENST00000476379 PRTN3P24158 256 aa3.9□□□□□ -1.79
CCDC39-204ENST00000476379 DEFB136Q30KP8 78 aa3.9□□□□□ -1.79
CCDC39-204ENST00000476379 PSMG4Q5JS54 123 aa3.9□□□□□ -1.79
CCDC39-204ENST00000476379 CENPVQ7Z7K6 275 aaPredicted RBP3.9□□□□□ -1.79
CCDC39-204ENST00000476379 OR10J6PQ8NGY7 276 aa3.9□□□□□ -1.79
CCDC39-204ENST00000476379 RPL39LQ96EH5 51 aaKnown RBP3.9□□□□□ -1.79
CCDC39-204ENST00000476379 PRSS46E5RG02 174 aa3.9□□□□□ -1.79
CCDC39-204ENST00000476379 RS1O15537 224 aa3.9□□□□□ -1.79
CCDC39-204ENST00000476379 TOMM40O96008 361 aa3.9□□□□□ -1.79
CCDC39-204ENST00000476379 LHBP01229 141 aa3.9□□□□□ -1.79
CCDC39-204ENST00000476379 SMIM13P0DJ93 91 aa3.9□□□□□ -1.79
CCDC39-204ENST00000476379 ATP5G2Q06055 141 aa3.9□□□□□ -1.79
CCDC39-204ENST00000476379 COA6Q5JTJ3 125 aaKnown RBP3.9□□□□□ -1.79
CCDC39-204ENST00000476379 SAMD13Q5VXD3 122 aa3.9□□□□□ -1.79
CCDC39-204ENST00000476379 DGAT2L7PQ6IED9 249 aa3.9□□□□□ -1.79
CCDC39-204ENST00000476379 CFHR4Q92496 578 aa3.9□□□□□ -1.79
CCDC39-204ENST00000476379 VWFP04275 2813 aa3.9□□□□□ -1.79
CCDC39-204ENST00000476379 SHISA9B4DS77 424 aa3.89□□□□□ -1.79
CCDC39-204ENST00000476379 RNF223E7ERA6 249 aa3.89□□□□□ -1.79
CCDC39-204ENST00000476379 COX6B1P14854 86 aa3.89□□□□□ -1.79
CCDC39-204ENST00000476379 BLCAPP62952 87 aa3.89□□□□□ -1.79
CCDC39-204ENST00000476379 OCIAD2Q56VL3 154 aa3.89□□□□□ -1.79
CCDC39-204ENST00000476379 SAMD5Q5TGI4 173 aa3.89□□□□□ -1.79
CCDC39-204ENST00000476379 ZNF815PA8K554 130 aa3.89□□□□□ -1.79
CCDC39-204ENST00000476379 NPIPB6E9PJ23 425 aa3.89□□□□□ -1.79
CCDC39-204ENST00000476379 K7EIM0 57 aa3.89□□□□□ -1.79
CCDC39-204ENST00000476379 IGF2-ASQ6U949 168 aa3.89□□□□□ -1.79
CCDC39-204ENST00000476379 C11orf52Q96A22 123 aa3.89□□□□□ -1.79
CCDC39-204ENST00000476379 MBD6Q96DN6 1003 aa3.89□□□□□ -1.79
CCDC39-204ENST00000476379 OPRPNQ99935 248 aaPredicted RBP3.89□□□□□ -1.79
CCDC39-204ENST00000476379 C2orf70A6NJV1 201 aa3.89□□□□□ -1.79
CCDC39-204ENST00000476379 IGLV2-23P01705 113 aa3.89□□□□□ -1.79
CCDC39-204ENST00000476379 PLA2G2AP14555 144 aa3.89□□□□□ -1.79
CCDC39-204ENST00000476379 GP9P14770 177 aa3.89□□□□□ -1.79
CCDC39-204ENST00000476379 ZFP36P26651 326 aaKnown RBP3.89□□□□□ -1.79
CCDC39-204ENST00000476379 FXYD2P54710 66 aa3.89□□□□□ -1.79
CCDC39-204ENST00000476379 SYNJ2BPP57105 145 aa3.89□□□□□ -1.79
CCDC39-204ENST00000476379 CFHR3Q02985 330 aa3.89□□□□□ -1.79
CCDC39-204ENST00000476379 SPINK13Q1W4C9 94 aa3.89□□□□□ -1.79
CCDC39-204ENST00000476379 FAM159AQ6UWV7 190 aa3.89□□□□□ -1.79
CCDC39-204ENST00000476379 TRGV9Q99603 122 aa3.89□□□□□ -1.79
CCDC39-204ENST00000476379 HLA-DRB4P13762 266 aa3.89□□□□□ -1.79
CCDC39-204ENST00000476379 EDN2P20800 178 aa3.89□□□□□ -1.79
CCDC39-204ENST00000476379 EIF4EBP1Q13541 118 aaPredicted RBP3.89□□□□□ -1.79
CCDC39-204ENST00000476379 C10orf99Q6UWK7 81 aa3.89□□□□□ -1.79
CCDC39-204ENST00000476379 C3orf56Q8N813 242 aa3.89□□□□□ -1.79
CCDC39-204ENST00000476379 PTH2Q96A98 100 aa3.89□□□□□ -1.79
CCDC39-204ENST00000476379 ZNF479Q96JC4 524 aa3.89□□□□□ -1.79
CCDC39-204ENST00000476379 UBE2E2Q96LR5 201 aa3.89□□□□□ -1.79
CCDC39-204ENST00000476379 PRR25Q96S07 402 aa3.89□□□□□ -1.79
CCDC39-204ENST00000476379 SHANK2-AS3Q9BTD1 123 aa3.89□□□□□ -1.79
CCDC39-204ENST00000476379 HLA-DRB4X5D2U9 266 aa3.89□□□□□ -1.79
CCDC39-204ENST00000476379 IGKCP01834 107 aa3.88□□□□□ -1.79
CCDC39-204ENST00000476379 CCDC144NLQ6NUI1 221 aa3.88□□□□□ -1.79
CCDC39-204ENST00000476379 C16orf54Q6UWD8 224 aa3.88□□□□□ -1.79
CCDC39-204ENST00000476379 DTX2Q86UW9 622 aa3.88□□□□□ -1.79
CCDC39-204ENST00000476379 WFDC11Q8NEX6 87 aa3.88□□□□□ -1.79
CCDC39-204ENST00000476379 SPAG8Q99932 426 aaPredicted RBP3.88□□□□□ -1.79
CCDC39-204ENST00000476379 ZNF747Q9BV97 191 aa3.88□□□□□ -1.79
CCDC39-204ENST00000476379 TOMM7Q9P0U1 55 aa3.88□□□□□ -1.79
CCDC39-204ENST00000476379 SPXQ9BT56 116 aa3.88□□□□□ -1.79
CCDC39-204ENST00000476379 CHAC1Q9BUX1 264 aa3.88□□□□□ -1.79
CCDC39-204ENST00000476379 IGKV2D-26A0A0A0MRZ7 120 aa3.88□□□□□ -1.79
CCDC39-204ENST00000476379 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.88□□□□□ -1.79
CCDC39-204ENST00000476379 CRIP1P50238 77 aa3.88□□□□□ -1.79
CCDC39-204ENST00000476379 SIGLEC15Q6ZMC9 328 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms