RNA–Protein interactions for RNA: ENST00000476045.5

VPS13D-206, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 5

Gene VPS13D, Length 380 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-206ENST00000476045 SIGLEC8Q9NYZ4 499 aa3.2□□□□□ -1.9
VPS13D-206ENST00000476045 ARL2-SNX15V9GYD0 113 aa3.2□□□□□ -1.9
VPS13D-206ENST00000476045 ALMS1Q8TCU4 4167 aa3.2□□□□□ -1.9
VPS13D-206ENST00000476045 IGHV4OR15-8A0A075B7B6 117 aa3.19□□□□□ -1.9
VPS13D-206ENST00000476045 A0A087WW49 117 aa3.19□□□□□ -1.9
VPS13D-206ENST00000476045 SMIM27A0A1W2PRY6 76 aa3.19□□□□□ -1.9
VPS13D-206ENST00000476045 A0A1W2PS18 150 aa3.19□□□□□ -1.9
VPS13D-206ENST00000476045 USP17L23D6RBM5 183 aa3.19□□□□□ -1.9
VPS13D-206ENST00000476045 HYPMO75409 117 aa3.19□□□□□ -1.9
VPS13D-206ENST00000476045 CNIH1O95406 144 aa3.19□□□□□ -1.9
VPS13D-206ENST00000476045 IGLV1-51P01701 117 aa3.19□□□□□ -1.9
VPS13D-206ENST00000476045 MT-ND6P03923 174 aa3.19□□□□□ -1.9
VPS13D-206ENST00000476045 GPX1P07203 203 aa3.19□□□□□ -1.9
VPS13D-206ENST00000476045 ESDP10768 282 aa3.19□□□□□ -1.9
VPS13D-206ENST00000476045 ZNF25P17030 456 aaPredicted RBP3.19□□□□□ -1.9
VPS13D-206ENST00000476045 EDN2P20800 178 aa3.19□□□□□ -1.9
VPS13D-206ENST00000476045 CAMPP49913 170 aa3.19□□□□□ -1.9
VPS13D-206ENST00000476045 MFAP4P55083 255 aa3.19□□□□□ -1.9
VPS13D-206ENST00000476045 UBE2G1P62253 170 aa3.19□□□□□ -1.9
VPS13D-206ENST00000476045 TMEM183BQ1AE95 376 aa3.19□□□□□ -1.9
VPS13D-206ENST00000476045 MRGPRG-AS1Q2M3A8 158 aa3.19□□□□□ -1.9
VPS13D-206ENST00000476045 COX19Q49B96 90 aa3.19□□□□□ -1.9
VPS13D-206ENST00000476045 LEMD1Q68G75 181 aa3.19□□□□□ -1.9
VPS13D-206ENST00000476045 TEX43Q6ZNM6 134 aa3.19□□□□□ -1.9
VPS13D-206ENST00000476045 TCF24Q7RTU0 167 aa3.19□□□□□ -1.9
VPS13D-206ENST00000476045 LINC00305Q7Z4B0 112 aa3.19□□□□□ -1.9
VPS13D-206ENST00000476045 ATOH7Q8N100 152 aa3.19□□□□□ -1.9
VPS13D-206ENST00000476045 FAM19A2Q8N3H0 131 aa3.19□□□□□ -1.9
VPS13D-206ENST00000476045 Q8N976 141 aa3.19□□□□□ -1.9
VPS13D-206ENST00000476045 TEX45Q8NA69 505 aa3.19□□□□□ -1.9
VPS13D-206ENST00000476045 THAP8Q8NA92 274 aa3.19□□□□□ -1.9
VPS13D-206ENST00000476045 TSKUQ8WUA8 353 aa3.19□□□□□ -1.9
VPS13D-206ENST00000476045 FXYD5Q96DB9 178 aa3.19□□□□□ -1.9
VPS13D-206ENST00000476045 KCNS1Q96KK3 526 aa3.19□□□□□ -1.9
VPS13D-206ENST00000476045 PGLYRP4Q96LB8 373 aa3.19□□□□□ -1.9
VPS13D-206ENST00000476045 MIEN1Q9BRT3 115 aa3.19□□□□□ -1.9
VPS13D-206ENST00000476045 EPDR1Q9UM22 224 aa3.19□□□□□ -1.9
VPS13D-206ENST00000476045 DNAH1Q9P2D7 4330 aa3.18□□□□□ -1.9
VPS13D-206ENST00000476045 IGLC7A0M8Q6 106 aa3.18□□□□□ -1.9
VPS13D-206ENST00000476045 INS-IGF2F8WCM5 200 aa3.18□□□□□ -1.9
VPS13D-206ENST00000476045 ZNF324O75467 553 aaPredicted RBP3.18□□□□□ -1.9
VPS13D-206ENST00000476045 HLA-DQA1P01909 254 aa3.18□□□□□ -1.9
VPS13D-206ENST00000476045 CRYGBP07316 175 aa3.18□□□□□ -1.9
VPS13D-206ENST00000476045 NBEAP1P0C6P0 100 aa3.18□□□□□ -1.9
VPS13D-206ENST00000476045 C3orf79P0CE67 100 aa3.18□□□□□ -1.9
VPS13D-206ENST00000476045 RAB4AP20338 218 aa3.18□□□□□ -1.9
VPS13D-206ENST00000476045 LYZP61626 148 aa3.18□□□□□ -1.9
VPS13D-206ENST00000476045 SLAQ13239 276 aa3.18□□□□□ -1.9
VPS13D-206ENST00000476045 SPATA45Q537H7 98 aa3.18□□□□□ -1.9
VPS13D-206ENST00000476045 LBHQ53QV2 105 aaPredicted RBP3.18□□□□□ -1.9
VPS13D-206ENST00000476045 OR10J3Q5JRS4 329 aa3.18□□□□□ -1.9
VPS13D-206ENST00000476045 ETFRF1Q6IPR1 90 aa3.18□□□□□ -1.9
VPS13D-206ENST00000476045 RNASEKQ6P5S7 137 aaKnown RBP3.18□□□□□ -1.9
VPS13D-206ENST00000476045 LINC00322Q6ZN03 302 aaPredicted RBP3.18□□□□□ -1.9
VPS13D-206ENST00000476045 FAM231DQ6ZW35 169 aa3.18□□□□□ -1.9
VPS13D-206ENST00000476045 NIT1Q86X76 327 aa3.18□□□□□ -1.9
VPS13D-206ENST00000476045 NUP35Q8NFH5 326 aa3.18□□□□□ -1.9
VPS13D-206ENST00000476045 OR9G4Q8NGQ1 327 aa3.18□□□□□ -1.9
VPS13D-206ENST00000476045 SRSF12Q8WXF0 261 aaKnown RBP3.18□□□□□ -1.9
VPS13D-206ENST00000476045 DLX4Q92988 240 aaPredicted RBP3.18□□□□□ -1.9
VPS13D-206ENST00000476045 BORCS7Q96B45 105 aa3.18□□□□□ -1.9
VPS13D-206ENST00000476045 TRGV9Q99603 122 aa3.18□□□□□ -1.9
VPS13D-206ENST00000476045 ASCL2Q99929 193 aa3.18□□□□□ -1.9
VPS13D-206ENST00000476045 C20orf144Q9BQM9 153 aa3.18□□□□□ -1.9
VPS13D-206ENST00000476045 SRSF8Q9BRL6 282 aaKnown RBP3.18□□□□□ -1.9
VPS13D-206ENST00000476045 TM2D3Q9BRN9 247 aa3.18□□□□□ -1.9
VPS13D-206ENST00000476045 A0A0A0MQY5 61 aa3.17□□□□□ -1.9
VPS13D-206ENST00000476045 M0R2Z0 102 aa3.17□□□□□ -1.9
VPS13D-206ENST00000476045 TOMM40O96008 361 aa3.17□□□□□ -1.9
VPS13D-206ENST00000476045 IGHV3-11P01762 117 aa3.17□□□□□ -1.9
VPS13D-206ENST00000476045 CRYGCP07315 174 aa3.17□□□□□ -1.9
VPS13D-206ENST00000476045 IGHV4-30-4P0DP06 118 aa3.17□□□□□ -1.9
VPS13D-206ENST00000476045 HIST1H1EP10412 219 aaKnown RBP3.17□□□□□ -1.9
VPS13D-206ENST00000476045 TFPI2P48307 235 aa3.17□□□□□ -1.9
VPS13D-206ENST00000476045 HNRNPA3P51991 378 aaKnown RBP3.17□□□□□ -1.9
VPS13D-206ENST00000476045 KLF5Q13887 457 aaPredicted RBP3.17□□□□□ -1.9
VPS13D-206ENST00000476045 PMCHL1Q16048 86 aa3.17□□□□□ -1.9
VPS13D-206ENST00000476045 ANXA2RQ3ZCQ2 193 aa3.17□□□□□ -1.9
VPS13D-206ENST00000476045 Q56UQ5 140 aa3.17□□□□□ -1.9
VPS13D-206ENST00000476045 EBLN2Q6P2I7 272 aa3.17□□□□□ -1.9
VPS13D-206ENST00000476045 GOLT1AQ6ZVE7 132 aa3.17□□□□□ -1.9
VPS13D-206ENST00000476045 PRNTQ86SH4 94 aa3.17□□□□□ -1.9
VPS13D-206ENST00000476045 EXOC3-AS1Q8N2X6 119 aa3.17□□□□□ -1.9
VPS13D-206ENST00000476045 OR4B1Q8NGF8 309 aa3.17□□□□□ -1.9
VPS13D-206ENST00000476045 C18orf32Q8TCD1 76 aa3.17□□□□□ -1.9
VPS13D-206ENST00000476045 DYNLRB2Q8TF09 96 aa3.17□□□□□ -1.9
VPS13D-206ENST00000476045 ATP6V0BQ99437 205 aa3.17□□□□□ -1.9
VPS13D-206ENST00000476045 TXN2Q99757 166 aa3.17□□□□□ -1.9
VPS13D-206ENST00000476045 ALKBH7Q9BT30 221 aaPredicted RBP3.17□□□□□ -1.9
VPS13D-206ENST00000476045 CHRDL1Q9BU40 450 aa3.17□□□□□ -1.9
VPS13D-206ENST00000476045 Q9H3A6 140 aa3.17□□□□□ -1.9
VPS13D-206ENST00000476045 RPP21Q9H633 154 aaKnown RBP3.17□□□□□ -1.9
VPS13D-206ENST00000476045 CLEC5AQ9NY25 188 aa3.17□□□□□ -1.9
VPS13D-206ENST00000476045 PEF1Q9UBV8 284 aaKnown RBP3.17□□□□□ -1.9
VPS13D-206ENST00000476045 HIGD1AQ9Y241 93 aa3.17□□□□□ -1.9
VPS13D-206ENST00000476045 S4R3C0 116 aa3.17□□□□□ -1.9
VPS13D-206ENST00000476045 PLECQ15149 4684 aaKnown RBP3.16□□□□□ -1.9
VPS13D-206ENST00000476045 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP3.16□□□□□ -1.9
VPS13D-206ENST00000476045 TRAV8-1A0A0A6YYK1 113 aa3.16□□□□□ -1.9
VPS13D-206ENST00000476045 LCE6AA0A183 80 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 145.5 ms