RNA–Protein interactions for RNA: ENST00000471887.1

HDAC9-221, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 446 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-221ENST00000471887 MAFIPQ8WZ33 124 aa1.92□□□□□ -2.1
HDAC9-221ENST00000471887 LSM10Q969L4 123 aaKnown RBP1.92□□□□□ -2.1
HDAC9-221ENST00000471887 TMEM203Q969S6 136 aa1.92□□□□□ -2.1
HDAC9-221ENST00000471887 MGLLQ99685 303 aa1.92□□□□□ -2.1
HDAC9-221ENST00000471887 C6orf62Q9GZU0 229 aaPredicted RBP1.92□□□□□ -2.1
HDAC9-221ENST00000471887 SCN3BQ9NY72 215 aa1.92□□□□□ -2.1
HDAC9-221ENST00000471887 ANXA10Q9UJ72 324 aa1.92□□□□□ -2.1
HDAC9-221ENST00000471887 APLNQ9ULZ1 77 aa1.92□□□□□ -2.1
HDAC9-221ENST00000471887 ANAPC10Q9UM13 185 aa1.92□□□□□ -2.1
HDAC9-221ENST00000471887 TPRKBQ9Y3C4 175 aa1.92□□□□□ -2.1
HDAC9-221ENST00000471887 RBM7Q9Y580 266 aaKnown RBP1.92□□□□□ -2.1
HDAC9-221ENST00000471887 ICOSQ9Y6W8 199 aa1.92□□□□□ -2.1
HDAC9-221ENST00000471887 FAT1Q14517 4588 aa1.91□□□□□ -2.1
HDAC9-221ENST00000471887 MUC4Q99102 2169 aa1.91□□□□□ -2.1
HDAC9-221ENST00000471887 A0A0A6YYH2 397 aa1.91□□□□□ -2.1
HDAC9-221ENST00000471887 TMEM235A6NFC5 223 aa1.91□□□□□ -2.1
HDAC9-221ENST00000471887 A6NJ64 397 aa1.91□□□□□ -2.1
HDAC9-221ENST00000471887 I3L2K1 104 aa1.91□□□□□ -2.1
HDAC9-221ENST00000471887 CYB5BO43169 146 aa1.91□□□□□ -2.1
HDAC9-221ENST00000471887 PPYP01298 95 aa1.91□□□□□ -2.1
HDAC9-221ENST00000471887 CTSDP07339 412 aaPredicted RBP1.91□□□□□ -2.1
HDAC9-221ENST00000471887 CTSGP08311 255 aa1.91□□□□□ -2.1
HDAC9-221ENST00000471887 DEFA4P12838 97 aa1.91□□□□□ -2.1
HDAC9-221ENST00000471887 MIFP14174 115 aa1.91□□□□□ -2.1
HDAC9-221ENST00000471887 NFYAP23511 347 aaPredicted RBP1.91□□□□□ -2.1
HDAC9-221ENST00000471887 CRHBPP24387 322 aa1.91□□□□□ -2.1
HDAC9-221ENST00000471887 OR10A3P58181 314 aa1.91□□□□□ -2.1
HDAC9-221ENST00000471887 GNG2P59768 71 aa1.91□□□□□ -2.1
HDAC9-221ENST00000471887 WT1-ASQ06250 92 aa1.91□□□□□ -2.1
HDAC9-221ENST00000471887 ZNF818PQ6ZRF7 136 aa1.91□□□□□ -2.1
HDAC9-221ENST00000471887 Q8NAQ8 132 aa1.91□□□□□ -2.1
HDAC9-221ENST00000471887 OR8A1Q8NGG7 326 aa1.91□□□□□ -2.1
HDAC9-221ENST00000471887 OR1L8Q8NGR8 309 aa1.91□□□□□ -2.1
HDAC9-221ENST00000471887 BORCS5Q969J3 196 aa1.91□□□□□ -2.1
HDAC9-221ENST00000471887 DGCR14Q96DF8 476 aaKnown RBP1.91□□□□□ -2.1
HDAC9-221ENST00000471887 DCUN1D5Q9BTE7 237 aa1.91□□□□□ -2.1
HDAC9-221ENST00000471887 COMMD5Q9GZQ3 224 aa1.91□□□□□ -2.1
HDAC9-221ENST00000471887 CCDC90BQ9GZT6 254 aa1.91□□□□□ -2.1
HDAC9-221ENST00000471887 NDUFA4L2Q9NRX3 87 aa1.91□□□□□ -2.1
HDAC9-221ENST00000471887 TAS2R8Q9NYW2 309 aa1.91□□□□□ -2.1
HDAC9-221ENST00000471887 SMPXQ9UHP9 88 aa1.91□□□□□ -2.1
HDAC9-221ENST00000471887 PRNDQ9UKY0 176 aa1.91□□□□□ -2.1
HDAC9-221ENST00000471887 HERC1Q15751 4861 aa1.9□□□□□ -2.1
HDAC9-221ENST00000471887 TRAV10A0A0B4J240 114 aa1.9□□□□□ -2.11
HDAC9-221ENST00000471887 TRAV3A0A0B4J244 114 aa1.9□□□□□ -2.11
HDAC9-221ENST00000471887 OR2T8A6NH00 312 aa1.9□□□□□ -2.11
HDAC9-221ENST00000471887 ZNF701M0R085 212 aaPredicted RBP1.9□□□□□ -2.11
HDAC9-221ENST00000471887 RGS5O15539 181 aa1.9□□□□□ -2.11
HDAC9-221ENST00000471887 ZNF73O43830 326 aaPredicted RBP1.9□□□□□ -2.11
HDAC9-221ENST00000471887 CDS2O95674 445 aa1.9□□□□□ -2.11
HDAC9-221ENST00000471887 IFNA4P05014 189 aa1.9□□□□□ -2.11
HDAC9-221ENST00000471887 REG1AP05451 166 aa1.9□□□□□ -2.11
HDAC9-221ENST00000471887 TRAPPC2P0DI81 140 aa1.9□□□□□ -2.11
HDAC9-221ENST00000471887 TRAPPC2BP0DI82 140 aa1.9□□□□□ -2.11
HDAC9-221ENST00000471887 OR13C7P0DN81 318 aa1.9□□□□□ -2.11
HDAC9-221ENST00000471887 PTHLHP12272 177 aa1.9□□□□□ -2.11
HDAC9-221ENST00000471887 CBX5P45973 191 aa1.9□□□□□ -2.11
HDAC9-221ENST00000471887 AQP4P55087 323 aa1.9□□□□□ -2.11
HDAC9-221ENST00000471887 GABARAPL2P60520 117 aa1.9□□□□□ -2.11
HDAC9-221ENST00000471887 PRCDQ00LT1 54 aa1.9□□□□□ -2.11
HDAC9-221ENST00000471887 PMVKQ15126 192 aa1.9□□□□□ -2.11
HDAC9-221ENST00000471887 LGALS9BQ3B8N2 356 aa1.9□□□□□ -2.11
HDAC9-221ENST00000471887 KRTAP13-4Q3LI77 160 aa1.9□□□□□ -2.11
HDAC9-221ENST00000471887 CDNFQ49AH0 187 aa1.9□□□□□ -2.11
HDAC9-221ENST00000471887 AADACL3Q5VUY0 350 aa1.9□□□□□ -2.11
HDAC9-221ENST00000471887 SFXN4Q6P4A7 337 aa1.9□□□□□ -2.11
HDAC9-221ENST00000471887 Q6ZQT7 251 aa1.9□□□□□ -2.11
HDAC9-221ENST00000471887 OR11H2Q8NH07 326 aa1.9□□□□□ -2.11
HDAC9-221ENST00000471887 LGALS14Q8TCE9 139 aa1.9□□□□□ -2.11
HDAC9-221ENST00000471887 GLYATL2Q8WU03 294 aa1.9□□□□□ -2.11
HDAC9-221ENST00000471887 FXYD5Q96DB9 178 aa1.9□□□□□ -2.11
HDAC9-221ENST00000471887 TMEM56Q96MV1 263 aa1.9□□□□□ -2.11
HDAC9-221ENST00000471887 TSC22D3Q99576 134 aa1.9□□□□□ -2.11
HDAC9-221ENST00000471887 GINS3Q9BRX5 216 aa1.9□□□□□ -2.11
HDAC9-221ENST00000471887 HIGD2AQ9BW72 106 aa1.9□□□□□ -2.11
HDAC9-221ENST00000471887 RHPN1-AS1Q9BWJ2 59 aa1.9□□□□□ -2.11
HDAC9-221ENST00000471887 NXF2Q9GZY0 626 aaKnown RBP1.9□□□□□ -2.11
HDAC9-221ENST00000471887 ATG5Q9H1Y0 275 aa1.9□□□□□ -2.11
HDAC9-221ENST00000471887 HRASLSQ9HDD0 168 aa1.9□□□□□ -2.11
HDAC9-221ENST00000471887 TMEM14BQ9NUH8 114 aa1.9□□□□□ -2.11
HDAC9-221ENST00000471887 PRO0628Q9UI54 55 aa1.9□□□□□ -2.11
HDAC9-221ENST00000471887 KLF12Q9Y4X4 402 aa1.9□□□□□ -2.11
HDAC9-221ENST00000471887 PKD1P98161 4303 aa1.89□□□□□ -2.11
HDAC9-221ENST00000471887 TRAV14DV4A0A0A6YYC5 116 aa1.89□□□□□ -2.11
HDAC9-221ENST00000471887 TEX50A0A1B0GTY4 177 aa1.89□□□□□ -2.11
HDAC9-221ENST00000471887 J3QRK9 145 aa1.89□□□□□ -2.11
HDAC9-221ENST00000471887 CORTO00230 105 aa1.89□□□□□ -2.11
HDAC9-221ENST00000471887 GPR31O00270 319 aa1.89□□□□□ -2.11
HDAC9-221ENST00000471887 SULT1C2O00338 296 aa1.89□□□□□ -2.11
HDAC9-221ENST00000471887 PGLYRP1O75594 196 aaPredicted RBP1.89□□□□□ -2.11
HDAC9-221ENST00000471887 P0DMU3 169 aa1.89□□□□□ -2.11
HDAC9-221ENST00000471887 FAM231AP0DMU4 169 aa1.89□□□□□ -2.11
HDAC9-221ENST00000471887 FAM231CP0DMU5 169 aa1.89□□□□□ -2.11
HDAC9-221ENST00000471887 PMCHP20382 165 aa1.89□□□□□ -2.11
HDAC9-221ENST00000471887 CRYBB3P26998 211 aa1.89□□□□□ -2.11
HDAC9-221ENST00000471887 HLA-DMBP28068 263 aa1.89□□□□□ -2.11
HDAC9-221ENST00000471887 RPL5P46777 297 aaKnown RBP1.89□□□□□ -2.11
HDAC9-221ENST00000471887 HSPA13P48723 471 aa1.89□□□□□ -2.11
HDAC9-221ENST00000471887 BSXQ3C1V8 233 aa1.89□□□□□ -2.11
HDAC9-221ENST00000471887 Q56UQ5 140 aa1.89□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms