RNA–Protein interactions for RNA: ENST00000471862.1

COL4A3-205, Transcript of collagen type IV alpha 3 chain, humanhuman

TSL 5

Gene COL4A3, Length 755 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-205ENST00000471862 HHLA3Q9XRX5 114 aa7.9□□□□□ -1.14
COL4A3-205ENST00000471862 APOBP04114 4563 aaKnown RBP7.9□□□□□ -1.15
COL4A3-205ENST00000471862 GGTLC3B5MD39 225 aa7.89□□□□□ -1.15
COL4A3-205ENST00000471862 TCRAP04437 139 aa7.89□□□□□ -1.15
COL4A3-205ENST00000471862 MRPL23Q16540 153 aaKnown RBP7.89□□□□□ -1.15
COL4A3-205ENST00000471862 RPL7L1Q6DKI1 246 aaKnown RBP7.89□□□□□ -1.15
COL4A3-205ENST00000471862 NAGKQ9UJ70 344 aa7.89□□□□□ -1.15
COL4A3-205ENST00000471862 ABCA13Q86UQ4 5058 aa7.89□□□□□ -1.15
COL4A3-205ENST00000471862 TRAV4A0A0B4J268 109 aa7.88□□□□□ -1.15
COL4A3-205ENST00000471862 TRGV4A0A0C4DH28 118 aa7.88□□□□□ -1.15
COL4A3-205ENST00000471862 M0R2P5 195 aa7.88□□□□□ -1.15
COL4A3-205ENST00000471862 SIVA1O15304 175 aa7.88□□□□□ -1.15
COL4A3-205ENST00000471862 NXPH4O95158 308 aa7.88□□□□□ -1.15
COL4A3-205ENST00000471862 CXorf1O96002 111 aa7.88□□□□□ -1.15
COL4A3-205ENST00000471862 IGLV2-11P01706 119 aa7.88□□□□□ -1.15
COL4A3-205ENST00000471862 ZNF80P51504 273 aaPredicted RBP7.88□□□□□ -1.15
COL4A3-205ENST00000471862 ZNF726P1Q15940 193 aa7.88□□□□□ -1.15
COL4A3-205ENST00000471862 LYPD5Q6UWN5 251 aa7.88□□□□□ -1.15
COL4A3-205ENST00000471862 Q6ZRN7 208 aaPredicted RBP7.88□□□□□ -1.15
COL4A3-205ENST00000471862 INO80EQ8NBZ0 244 aaPredicted RBP7.88□□□□□ -1.15
COL4A3-205ENST00000471862 SGK494Q96LW2 274 aa7.88□□□□□ -1.15
COL4A3-205ENST00000471862 ACTR3CQ9C0K3 210 aaPredicted RBP7.88□□□□□ -1.15
COL4A3-205ENST00000471862 TMEM167BQ9NRX6 74 aa7.88□□□□□ -1.15
COL4A3-205ENST00000471862 C11orf21Q9P2W6 132 aa7.88□□□□□ -1.15
COL4A3-205ENST00000471862 FXYD6-FXYD2A0A087WZ82 144 aa7.87□□□□□ -1.15
COL4A3-205ENST00000471862 K7EQD1 137 aa7.87□□□□□ -1.15
COL4A3-205ENST00000471862 LINC00315P59091 139 aa7.87□□□□□ -1.15
COL4A3-205ENST00000471862 SUMO1P63165 101 aaKnown RBP7.87□□□□□ -1.15
COL4A3-205ENST00000471862 NEGR1Q7Z3B1 354 aa7.87□□□□□ -1.15
COL4A3-205ENST00000471862 TMEM75Q8N9X5 138 aa7.87□□□□□ -1.15
COL4A3-205ENST00000471862 OR2T35Q8NGX2 323 aa7.87□□□□□ -1.15
COL4A3-205ENST00000471862 KCNS1Q96KK3 526 aa7.87□□□□□ -1.15
COL4A3-205ENST00000471862 NDFIP1Q9BT67 221 aa7.87□□□□□ -1.15
COL4A3-205ENST00000471862 SDF2L1Q9HCN8 221 aa7.87□□□□□ -1.15
COL4A3-205ENST00000471862 EPDR1Q9UM22 224 aa7.87□□□□□ -1.15
COL4A3-205ENST00000471862 PSG8Q9UQ74 426 aa7.87□□□□□ -1.15
COL4A3-205ENST00000471862 BORCS7-ASMTA0A0B4J1R7 106 aa7.86□□□□□ -1.15
COL4A3-205ENST00000471862 A0A1W2PRE2 83 aa7.86□□□□□ -1.15
COL4A3-205ENST00000471862 C16orf90A8MZG2 172 aa7.86□□□□□ -1.15
COL4A3-205ENST00000471862 FLI1Q01543 452 aaPredicted RBP7.86□□□□□ -1.15
COL4A3-205ENST00000471862 CYB561D1Q8N8Q1 229 aa7.86□□□□□ -1.15
COL4A3-205ENST00000471862 CTXND1A0A1B0GTU2 59 aa7.85□□□□□ -1.15
COL4A3-205ENST00000471862 K7EQM0 130 aa7.85□□□□□ -1.15
COL4A3-205ENST00000471862 GCGP01275 180 aa7.85□□□□□ -1.15
COL4A3-205ENST00000471862 ORM1P02763 201 aa7.85□□□□□ -1.15
COL4A3-205ENST00000471862 GYPEP15421 78 aa7.85□□□□□ -1.15
COL4A3-205ENST00000471862 RGS21Q2M5E4 152 aa7.85□□□□□ -1.15
COL4A3-205ENST00000471862 SPATA12Q7Z6I5 190 aa7.85□□□□□ -1.15
COL4A3-205ENST00000471862 OR4C5Q8NGB2 326 aa7.85□□□□□ -1.15
COL4A3-205ENST00000471862 C9orf85Q96MD7 179 aa7.85□□□□□ -1.15
COL4A3-205ENST00000471862 CYTL1Q9NRR1 136 aa7.85□□□□□ -1.15
COL4A3-205ENST00000471862 LOC100131303A0A0U1RQF7 123 aa7.84□□□□□ -1.15
COL4A3-205ENST00000471862 FBLL1A6NHQ2 334 aaKnown RBP7.84□□□□□ -1.15
COL4A3-205ENST00000471862 TAAR5O14804 337 aa7.84□□□□□ -1.15
COL4A3-205ENST00000471862 CDK2AP2O75956 126 aa7.84□□□□□ -1.15
COL4A3-205ENST00000471862 PFN1P07737 140 aaKnown RBP7.84□□□□□ -1.15
COL4A3-205ENST00000471862 GATA1P15976 413 aaPredicted RBP7.84□□□□□ -1.15
COL4A3-205ENST00000471862 SRIP30626 198 aa7.84□□□□□ -1.15
COL4A3-205ENST00000471862 KRTAP10-2P60368 255 aa7.84□□□□□ -1.15
COL4A3-205ENST00000471862 SMUG1Q53HV7 270 aa7.84□□□□□ -1.15
COL4A3-205ENST00000471862 DPPA3Q6W0C5 159 aa7.84□□□□□ -1.15
COL4A3-205ENST00000471862 PTH2Q96A98 100 aa7.84□□□□□ -1.15
COL4A3-205ENST00000471862 C9JCJ5 164 aa7.83□□□□□ -1.16
COL4A3-205ENST00000471862 RS1O15537 224 aa7.83□□□□□ -1.16
COL4A3-205ENST00000471862 RNASE3P12724 160 aaKnown RBP7.83□□□□□ -1.16
COL4A3-205ENST00000471862 PRNTQ86SH4 94 aa7.83□□□□□ -1.16
COL4A3-205ENST00000471862 WFDC10BQ8IUB3 73 aa7.83□□□□□ -1.16
COL4A3-205ENST00000471862 PCNPQ8WW12 178 aaKnown RBP7.83□□□□□ -1.16
COL4A3-205ENST00000471862 LINC00479Q96M42 142 aa7.83□□□□□ -1.16
COL4A3-205ENST00000471862 TXNDC17Q9BRA2 123 aa7.83□□□□□ -1.16
COL4A3-205ENST00000471862 TRAV34A0A0B4J273 112 aa7.82□□□□□ -1.16
COL4A3-205ENST00000471862 PGPEP1LA6NFU8 196 aa7.82□□□□□ -1.16
COL4A3-205ENST00000471862 FAM74A7A6NL05 159 aa7.82□□□□□ -1.16
COL4A3-205ENST00000471862 CIDEAO60543 219 aa7.82□□□□□ -1.16
COL4A3-205ENST00000471862 DNAH10OSP0CZ25 163 aa7.82□□□□□ -1.16
COL4A3-205ENST00000471862 FGF8P55075 233 aaPredicted RBP7.82□□□□□ -1.16
COL4A3-205ENST00000471862 TIRAPP58753 221 aa7.82□□□□□ -1.16
COL4A3-205ENST00000471862 ZNF876PQ49A33 203 aa7.82□□□□□ -1.16
COL4A3-205ENST00000471862 ZFP69Q49AA0 526 aa7.82□□□□□ -1.16
COL4A3-205ENST00000471862 SAPCD1Q5SSQ6 148 aa7.82□□□□□ -1.16
COL4A3-205ENST00000471862 AKR1C8PQ5T2L2 129 aa7.82□□□□□ -1.16
COL4A3-205ENST00000471862 CFAP126Q5VTH2 177 aa7.82□□□□□ -1.16
COL4A3-205ENST00000471862 KRTAP4-5Q9BYR2 181 aa7.82□□□□□ -1.16
COL4A3-205ENST00000471862 TNFRSF18Q9Y5U5 241 aa7.82□□□□□ -1.16
COL4A3-205ENST00000471862 ARL2-SNX15V9GYD0 113 aa7.82□□□□□ -1.16
COL4A3-205ENST00000471862 IGKV3D-20A0A0C4DH25 116 aa7.81□□□□□ -1.16
COL4A3-205ENST00000471862 K7EP13 123 aa7.81□□□□□ -1.16
COL4A3-205ENST00000471862 PEX7O00628 323 aa7.81□□□□□ -1.16
COL4A3-205ENST00000471862 ARPC5O15511 151 aa7.81□□□□□ -1.16
COL4A3-205ENST00000471862 UBE2G2P60604 165 aa7.81□□□□□ -1.16
COL4A3-205ENST00000471862 ZNF506Q5JVG8 444 aa7.81□□□□□ -1.16
COL4A3-205ENST00000471862 SH2D6Q7Z4S9 175 aa7.81□□□□□ -1.16
COL4A3-205ENST00000471862 Q86TA4 180 aa7.81□□□□□ -1.16
COL4A3-205ENST00000471862 LY96Q9Y6Y9 160 aa7.81□□□□□ -1.16
COL4A3-205ENST00000471862 TRBV6-4A0A1B0GX49 114 aa7.8□□□□□ -1.16
COL4A3-205ENST00000471862 MAP1LC3B2A6NCE7 125 aa7.8□□□□□ -1.16
COL4A3-205ENST00000471862 SMLR1H3BR10 107 aa7.8□□□□□ -1.16
COL4A3-205ENST00000471862 IFNA7P01567 189 aa7.8□□□□□ -1.16
COL4A3-205ENST00000471862 COX8CQ7Z4L0 72 aa7.8□□□□□ -1.16
COL4A3-205ENST00000471862 SLC25A29Q8N8R3 303 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms