RNA–Protein interactions for RNA: ENST00000471218.5

PTPRE-207, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 3 BASIC

Gene PTPRE, Length 522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-207ENST00000471218 CD300EQ496F6 205 aaPredicted RBP6.8□□□□□ -1.32
PTPRE-207ENST00000471218 KCNS1Q96KK3 526 aa6.8□□□□□ -1.32
PTPRE-207ENST00000471218 SGK494Q96LW2 274 aa6.8□□□□□ -1.32
PTPRE-207ENST00000471218 C8orf49Q96NF6 230 aa6.8□□□□□ -1.32
PTPRE-207ENST00000471218 ZNF256Q9Y2P7 627 aaPredicted RBP6.8□□□□□ -1.32
PTPRE-207ENST00000471218 GPX1P07203 203 aa6.79□□□□□ -1.32
PTPRE-207ENST00000471218 OR5AL1P0C617 328 aa6.79□□□□□ -1.32
PTPRE-207ENST00000471218 IGLC6P0CF74 106 aa6.79□□□□□ -1.32
PTPRE-207ENST00000471218 COA6Q5JTJ3 125 aaKnown RBP6.79□□□□□ -1.32
PTPRE-207ENST00000471218 C9orf66Q5T8R8 295 aa6.79□□□□□ -1.32
PTPRE-207ENST00000471218 GTSF1Q8WW33 167 aa6.79□□□□□ -1.32
PTPRE-207ENST00000471218 RYR3Q15413 4870 aa6.78□□□□□ -1.32
PTPRE-207ENST00000471218 IGHV4-4A0A075B6R2 117 aa6.78□□□□□ -1.32
PTPRE-207ENST00000471218 H3BMM0 161 aa6.78□□□□□ -1.32
PTPRE-207ENST00000471218 SAP30O75446 220 aa6.78□□□□□ -1.32
PTPRE-207ENST00000471218 EDN2P20800 178 aa6.78□□□□□ -1.32
PTPRE-207ENST00000471218 CDKN1BP46527 198 aa6.78□□□□□ -1.32
PTPRE-207ENST00000471218 CACNG7P62955 275 aa6.78□□□□□ -1.32
PTPRE-207ENST00000471218 FER1L6-AS1Q8NA97 138 aa6.78□□□□□ -1.32
PTPRE-207ENST00000471218 DUX3Q96PT4 197 aa6.78□□□□□ -1.32
PTPRE-207ENST00000471218 LINC00467Q9BRT7 94 aa6.78□□□□□ -1.32
PTPRE-207ENST00000471218 SSBP4Q9BWG4 385 aaPredicted RBP6.78□□□□□ -1.32
PTPRE-207ENST00000471218 MAP6D1Q9H9H5 199 aa6.78□□□□□ -1.32
PTPRE-207ENST00000471218 TMA7Q9Y2S6 64 aaKnown RBP6.78□□□□□ -1.32
PTPRE-207ENST00000471218 IGKV3-7A0A075B6H7 116 aa6.77□□□□□ -1.33
PTPRE-207ENST00000471218 C7orf71A4D174 169 aa6.77□□□□□ -1.33
PTPRE-207ENST00000471218 OR11H12B2RN74 326 aa6.77□□□□□ -1.33
PTPRE-207ENST00000471218 SNAI2O43623 268 aa6.77□□□□□ -1.33
PTPRE-207ENST00000471218 CA1P00915 261 aaPredicted RBP6.77□□□□□ -1.33
PTPRE-207ENST00000471218 ORM1P02763 201 aa6.77□□□□□ -1.33
PTPRE-207ENST00000471218 TRGC2P03986 189 aa6.77□□□□□ -1.33
PTPRE-207ENST00000471218 S100A6P06703 90 aa6.77□□□□□ -1.33
PTPRE-207ENST00000471218 ZNF80P51504 273 aaPredicted RBP6.77□□□□□ -1.33
PTPRE-207ENST00000471218 DEFB131AP59861 70 aa6.77□□□□□ -1.33
PTPRE-207ENST00000471218 NUTF2P61970 127 aaKnown RBP6.77□□□□□ -1.33
PTPRE-207ENST00000471218 AMTNQ6UX39 209 aa6.77□□□□□ -1.33
PTPRE-207ENST00000471218 ZNF493Q6ZR52 646 aa6.77□□□□□ -1.33
PTPRE-207ENST00000471218 TMEM136Q6ZRR5 245 aa6.77□□□□□ -1.33
PTPRE-207ENST00000471218 WFDC3Q8IUB2 231 aa6.77□□□□□ -1.33
PTPRE-207ENST00000471218 FRZBQ92765 325 aa6.77□□□□□ -1.33
PTPRE-207ENST00000471218 TP53TG3Q9ULZ0 132 aa6.77□□□□□ -1.33
PTPRE-207ENST00000471218 TRAPPC1Q9Y5R8 145 aa6.77□□□□□ -1.33
PTPRE-207ENST00000471218 SNURFLB1AK76 121 aa6.76□□□□□ -1.33
PTPRE-207ENST00000471218 HIST1H2BKO60814 126 aa6.76□□□□□ -1.33
PTPRE-207ENST00000471218 HIST1H2BJP06899 126 aa6.76□□□□□ -1.33
PTPRE-207ENST00000471218 HIST1H2BOP23527 126 aa6.76□□□□□ -1.33
PTPRE-207ENST00000471218 HIST1H2BBP33778 126 aa6.76□□□□□ -1.33
PTPRE-207ENST00000471218 TFPI2P48307 235 aa6.76□□□□□ -1.33
PTPRE-207ENST00000471218 TCL1AP56279 114 aa6.76□□□□□ -1.33
PTPRE-207ENST00000471218 HIST1H2BDP58876 126 aa6.76□□□□□ -1.33
PTPRE-207ENST00000471218 HIST1H2BCP62807 126 aa6.76□□□□□ -1.33
PTPRE-207ENST00000471218 HIST2H2BEQ16778 126 aa6.76□□□□□ -1.33
PTPRE-207ENST00000471218 ODF3L2Q3SX64 289 aa6.76□□□□□ -1.33
PTPRE-207ENST00000471218 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.76□□□□□ -1.33
PTPRE-207ENST00000471218 PIK3CD-AS1Q5SR53 167 aa6.76□□□□□ -1.33
PTPRE-207ENST00000471218 TMEM256Q8N2U0 113 aa6.76□□□□□ -1.33
PTPRE-207ENST00000471218 HIST1H2BHQ93079 126 aa6.76□□□□□ -1.33
PTPRE-207ENST00000471218 HIST1H2BNQ99877 126 aa6.76□□□□□ -1.33
PTPRE-207ENST00000471218 HIST1H2BMQ99879 126 aa6.76□□□□□ -1.33
PTPRE-207ENST00000471218 NDUFAF3Q9BU61 184 aa6.76□□□□□ -1.33
PTPRE-207ENST00000471218 IGKV3D-20A0A0C4DH25 116 aa6.75□□□□□ -1.33
PTPRE-207ENST00000471218 F6UB75 175 aa6.75□□□□□ -1.33
PTPRE-207ENST00000471218 ZNF324O75467 553 aaPredicted RBP6.75□□□□□ -1.33
PTPRE-207ENST00000471218 NXPH4O95158 308 aa6.75□□□□□ -1.33
PTPRE-207ENST00000471218 APCSP02743 223 aa6.75□□□□□ -1.33
PTPRE-207ENST00000471218 ASIPP42127 132 aa6.75□□□□□ -1.33
PTPRE-207ENST00000471218 OR10J3Q5JRS4 329 aa6.75□□□□□ -1.33
PTPRE-207ENST00000471218 MRPL54Q6P161 138 aaKnown RBP6.75□□□□□ -1.33
PTPRE-207ENST00000471218 MUC7Q8TAX7 377 aa6.75□□□□□ -1.33
PTPRE-207ENST00000471218 PGLYRP4Q96LB8 373 aa6.75□□□□□ -1.33
PTPRE-207ENST00000471218 MRPL18Q9H0U6 180 aaKnown RBP6.75□□□□□ -1.33
PTPRE-207ENST00000471218 SCRT2Q9NQ03 307 aa6.75□□□□□ -1.33
PTPRE-207ENST00000471218 TRGV11A0A075B6L2 103 aa6.74□□□□□ -1.33
PTPRE-207ENST00000471218 C5orf52A6NGY3 159 aa6.74□□□□□ -1.33
PTPRE-207ENST00000471218 PPBPP02775 128 aa6.74□□□□□ -1.33
PTPRE-207ENST00000471218 Q0VG73 95 aa6.74□□□□□ -1.33
PTPRE-207ENST00000471218 FABP9Q0Z7S8 132 aa6.74□□□□□ -1.33
PTPRE-207ENST00000471218 PRR9Q5T870 116 aa6.74□□□□□ -1.33
PTPRE-207ENST00000471218 GFI1BQ5VTD9 330 aa6.74□□□□□ -1.33
PTPRE-207ENST00000471218 MORN3Q6PF18 240 aaPredicted RBP6.74□□□□□ -1.33
PTPRE-207ENST00000471218 LYZL1Q6UWQ5 148 aa6.74□□□□□ -1.33
PTPRE-207ENST00000471218 FAM159AQ6UWV7 190 aa6.74□□□□□ -1.33
PTPRE-207ENST00000471218 SMIM15Q7Z3B0 74 aa6.74□□□□□ -1.33
PTPRE-207ENST00000471218 TRPT1Q86TN4 253 aaKnown RBP6.74□□□□□ -1.33
PTPRE-207ENST00000471218 STHQ8IWL8 128 aa6.74□□□□□ -1.33
PTPRE-207ENST00000471218 PTH2Q96A98 100 aa6.74□□□□□ -1.33
PTPRE-207ENST00000471218 PACRGQ96M98 296 aaPredicted RBP6.74□□□□□ -1.33
PTPRE-207ENST00000471218 C1QTNF4Q9BXJ3 329 aa6.74□□□□□ -1.33
PTPRE-207ENST00000471218 TMEM191AQ9H0A3 160 aa6.74□□□□□ -1.33
PTPRE-207ENST00000471218 ZMAT4Q9H898 229 aa6.74□□□□□ -1.33
PTPRE-207ENST00000471218 LAMTOR2Q9Y2Q5 125 aa6.74□□□□□ -1.33
PTPRE-207ENST00000471218 STAB2Q8WWQ8 2551 aa6.73□□□□□ -1.33
PTPRE-207ENST00000471218 UBE2CO00762 179 aa6.73□□□□□ -1.33
PTPRE-207ENST00000471218 INSP01308 110 aa6.73□□□□□ -1.33
PTPRE-207ENST00000471218 TRGC1P0CF51 173 aa6.73□□□□□ -1.33
PTPRE-207ENST00000471218 ZNF705DP0CH99 300 aaPredicted RBP6.73□□□□□ -1.33
PTPRE-207ENST00000471218 ZNF705BP0CI00 300 aaPredicted RBP6.73□□□□□ -1.33
PTPRE-207ENST00000471218 RNASE4P34096 147 aaKnown RBP6.73□□□□□ -1.33
PTPRE-207ENST00000471218 CASC10Q5T4H9 136 aa6.73□□□□□ -1.33
PTPRE-207ENST00000471218 GDF5OSQ5U4N7 250 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms