RNA–Protein interactions for RNA: ENST00000470241.2

SMC1A-206, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 838 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-206ENST00000470241 GSN-AS1Q9NRJ2 163 aa7.55□□□□□ -1.2
SMC1A-206ENST00000470241 DKK2Q9UBU2 259 aa7.55□□□□□ -1.2
SMC1A-206ENST00000470241 COL7A1Q02388 2944 aa7.55□□□□□ -1.2
SMC1A-206ENST00000470241 MGST1P10620 155 aaKnown RBP7.54□□□□□ -1.2
SMC1A-206ENST00000470241 IBA57Q5T440 356 aaKnown RBP7.54□□□□□ -1.2
SMC1A-206ENST00000470241 FAM222AQ5U5X8 452 aa7.54□□□□□ -1.2
SMC1A-206ENST00000470241 PRR27Q6MZM9 219 aa7.54□□□□□ -1.2
SMC1A-206ENST00000470241 ZNF575Q86XF7 245 aa7.54□□□□□ -1.2
SMC1A-206ENST00000470241 IL17DQ8TAD2 202 aa7.54□□□□□ -1.2
SMC1A-206ENST00000470241 OCC1Q8TAD7 63 aa7.54□□□□□ -1.2
SMC1A-206ENST00000470241 KCNS1Q96KK3 526 aa7.54□□□□□ -1.2
SMC1A-206ENST00000470241 WWC2-AS2Q96NR7 200 aa7.54□□□□□ -1.2
SMC1A-206ENST00000470241 SDF2L1Q9HCN8 221 aa7.54□□□□□ -1.2
SMC1A-206ENST00000470241 MDFICQ9P1T7 246 aa7.54□□□□□ -1.2
SMC1A-206ENST00000470241 TGP01266 2768 aa7.53□□□□□ -1.2
SMC1A-206ENST00000470241 TRGV11A0A075B6L2 103 aa7.53□□□□□ -1.2
SMC1A-206ENST00000470241 IGHV3-16A0A0C4DH30 117 aa7.53□□□□□ -1.2
SMC1A-206ENST00000470241 CXorf65A6NEN9 183 aa7.53□□□□□ -1.2
SMC1A-206ENST00000470241 ZNF727A8MUV8 499 aa7.53□□□□□ -1.2
SMC1A-206ENST00000470241 KRBOX1C9JBD0 128 aa7.53□□□□□ -1.2
SMC1A-206ENST00000470241 K7EN84 100 aa7.53□□□□□ -1.2
SMC1A-206ENST00000470241 M0R036 132 aa7.53□□□□□ -1.2
SMC1A-206ENST00000470241 ORM1P02763 201 aa7.53□□□□□ -1.2
SMC1A-206ENST00000470241 SPART-AS1P0CW21 52 aa7.53□□□□□ -1.2
SMC1A-206ENST00000470241 TCL1AP56279 114 aa7.53□□□□□ -1.2
SMC1A-206ENST00000470241 NANOS2P60321 138 aaKnown RBP7.53□□□□□ -1.2
SMC1A-206ENST00000470241 DAZ2Q13117 558 aaKnown RBP7.53□□□□□ -1.2
SMC1A-206ENST00000470241 OR5I1Q13606 314 aa7.53□□□□□ -1.2
SMC1A-206ENST00000470241 C12orf74Q32Q52 190 aa7.53□□□□□ -1.2
SMC1A-206ENST00000470241 LINC01559Q495D7 138 aa7.53□□□□□ -1.2
SMC1A-206ENST00000470241 C11orf45Q8TAV5 145 aa7.53□□□□□ -1.2
SMC1A-206ENST00000470241 SMIM7Q9BQ49 75 aa7.53□□□□□ -1.2
SMC1A-206ENST00000470241 NOP10Q9NPE3 64 aaKnown RBP7.53□□□□□ -1.2
SMC1A-206ENST00000470241 TIMM8BQ9Y5J9 83 aaPredicted RBP7.53□□□□□ -1.2
SMC1A-206ENST00000470241 LINC00862A6NCI5 91 aa7.52□□□□□ -1.21
SMC1A-206ENST00000470241 C19orf71A6NCJ1 209 aa7.52□□□□□ -1.21
SMC1A-206ENST00000470241 LYRM9A8MSI8 78 aa7.52□□□□□ -1.21
SMC1A-206ENST00000470241 SNURFLB1AK76 121 aa7.52□□□□□ -1.21
SMC1A-206ENST00000470241 B4DEV8 164 aa7.52□□□□□ -1.21
SMC1A-206ENST00000470241 ZNF415Q09FC8 603 aa7.52□□□□□ -1.21
SMC1A-206ENST00000470241 LINC00612Q8N6U2 182 aa7.52□□□□□ -1.21
SMC1A-206ENST00000470241 LY96Q9Y6Y9 160 aa7.52□□□□□ -1.21
SMC1A-206ENST00000470241 DNAH7Q8WXX0 4024 aa7.51□□□□□ -1.21
SMC1A-206ENST00000470241 TMSB15BA0A087X1C1 80 aa7.51□□□□□ -1.21
SMC1A-206ENST00000470241 TEX48A0A1B0GUV7 120 aa7.51□□□□□ -1.21
SMC1A-206ENST00000470241 SPINK4O60575 86 aa7.51□□□□□ -1.21
SMC1A-206ENST00000470241 RNASE3P12724 160 aaKnown RBP7.51□□□□□ -1.21
SMC1A-206ENST00000470241 RPL19P84098 196 aaKnown RBP7.51□□□□□ -1.21
SMC1A-206ENST00000470241 FAM74A3Q4VXF1 159 aa7.51□□□□□ -1.21
SMC1A-206ENST00000470241 SOHLH1Q5JUK2 328 aa7.51□□□□□ -1.21
SMC1A-206ENST00000470241 LINC01551Q86U37 167 aa7.51□□□□□ -1.21
SMC1A-206ENST00000470241 COMMD7Q86VX2 200 aa7.51□□□□□ -1.21
SMC1A-206ENST00000470241 BIN3Q9NQY0 253 aa7.51□□□□□ -1.21
SMC1A-206ENST00000470241 GRIFINA4D1Z8 144 aa7.5□□□□□ -1.21
SMC1A-206ENST00000470241 SFTA3P0C7M3 94 aa7.5□□□□□ -1.21
SMC1A-206ENST00000470241 DEFB130BP0DP73 79 aa7.5□□□□□ -1.21
SMC1A-206ENST00000470241 DEFB130AP0DP74 79 aa7.5□□□□□ -1.21
SMC1A-206ENST00000470241 TMEM241Q24JQ0 296 aa7.5□□□□□ -1.21
SMC1A-206ENST00000470241 DNLZQ5SXM8 178 aa7.5□□□□□ -1.21
SMC1A-206ENST00000470241 UQCC3Q6UW78 93 aa7.5□□□□□ -1.21
SMC1A-206ENST00000470241 Q6ZTC4 211 aa7.5□□□□□ -1.21
SMC1A-206ENST00000470241 Q6ZTI0 123 aa7.5□□□□□ -1.21
SMC1A-206ENST00000470241 NUDT10Q8NFP7 164 aa7.5□□□□□ -1.21
SMC1A-206ENST00000470241 NUDT11Q96G61 164 aa7.5□□□□□ -1.21
SMC1A-206ENST00000470241 C9orf85Q96MD7 179 aa7.5□□□□□ -1.21
SMC1A-206ENST00000470241 SPXQ9BT56 116 aa7.5□□□□□ -1.21
SMC1A-206ENST00000470241 RNASE7Q9H1E1 156 aaKnown RBP7.5□□□□□ -1.21
SMC1A-206ENST00000470241 TRGV1A0A0A0MS02 117 aa7.49□□□□□ -1.21
SMC1A-206ENST00000470241 GAGE12BA1L429 117 aa7.49□□□□□ -1.21
SMC1A-206ENST00000470241 GAGE7O76087 117 aa7.49□□□□□ -1.21
SMC1A-206ENST00000470241 CXCL1P09341 107 aa7.49□□□□□ -1.21
SMC1A-206ENST00000470241 GAGE12FP0CL80 117 aa7.49□□□□□ -1.21
SMC1A-206ENST00000470241 GAGE12GP0CL81 117 aa7.49□□□□□ -1.21
SMC1A-206ENST00000470241 GAGE12IP0CL82 117 aa7.49□□□□□ -1.21
SMC1A-206ENST00000470241 ASIPP42127 132 aa7.49□□□□□ -1.21
SMC1A-206ENST00000470241 DAD1P61803 113 aa7.49□□□□□ -1.21
SMC1A-206ENST00000470241 RPL23P62829 140 aaKnown RBP7.49□□□□□ -1.21
SMC1A-206ENST00000470241 LGALS9BQ3B8N2 356 aa7.49□□□□□ -1.21
SMC1A-206ENST00000470241 MUC7Q8TAX7 377 aa7.49□□□□□ -1.21
SMC1A-206ENST00000470241 DAZAP1Q96EP5 407 aaKnown RBP7.49□□□□□ -1.21
SMC1A-206ENST00000470241 MRPL16Q9NX20 251 aaKnown RBP7.49□□□□□ -1.21
SMC1A-206ENST00000470241 NAT8Q9UHE5 227 aa7.49□□□□□ -1.21
SMC1A-206ENST00000470241 DYNC2H1Q8NCM8 4307 aaKnown RBP7.49□□□□□ -1.21
SMC1A-206ENST00000470241 H3BVH4 76 aa7.48□□□□□ -1.21
SMC1A-206ENST00000470241 M0R2P5 195 aa7.48□□□□□ -1.21
SMC1A-206ENST00000470241 P01737 135 aa7.48□□□□□ -1.21
SMC1A-206ENST00000470241 ARMS2P0C7Q2 107 aa7.48□□□□□ -1.21
SMC1A-206ENST00000470241 S100A4P26447 101 aaKnown RBP7.48□□□□□ -1.21
SMC1A-206ENST00000470241 FAM231DQ6ZW35 169 aa7.48□□□□□ -1.21
SMC1A-206ENST00000470241 OR2D3Q8NGH3 330 aa7.48□□□□□ -1.21
SMC1A-206ENST00000470241 SCRT2Q9NQ03 307 aa7.48□□□□□ -1.21
SMC1A-206ENST00000470241 IL36BQ9NZH7 164 aa7.48□□□□□ -1.21
SMC1A-206ENST00000470241 TMEM218A2RU14 115 aa7.47□□□□□ -1.21
SMC1A-206ENST00000470241 GZMBP10144 247 aa7.47□□□□□ -1.21
SMC1A-206ENST00000470241 ERVFC1-1P60608 527 aa7.47□□□□□ -1.21
SMC1A-206ENST00000470241 ADIRFQ15847 76 aa7.47□□□□□ -1.21
SMC1A-206ENST00000470241 ZFAND6Q6FIF0 208 aa7.47□□□□□ -1.21
SMC1A-206ENST00000470241 PHLDA1Q8WV24 401 aaPredicted RBP7.47□□□□□ -1.21
SMC1A-206ENST00000470241 RASL10AQ92737 203 aa7.47□□□□□ -1.21
SMC1A-206ENST00000470241 ISOC2Q96AB3 205 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms