RNA–Protein interactions for RNA: ENST00000468039.1

U2AF1-207, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 5

Gene U2AF1, Length 609 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-207ENST00000468039 HMGB3O15347 200 aaKnown RBP3.59□□□□□ -1.83
U2AF1-207ENST00000468039 ATP6V0CP27449 155 aa3.59□□□□□ -1.83
U2AF1-207ENST00000468039 XGP55808 180 aa3.59□□□□□ -1.83
U2AF1-207ENST00000468039 KRTAP10-5P60370 271 aa3.59□□□□□ -1.83
U2AF1-207ENST00000468039 HIST1H1AQ02539 215 aaPredicted RBP3.59□□□□□ -1.83
U2AF1-207ENST00000468039 SLAQ13239 276 aa3.59□□□□□ -1.83
U2AF1-207ENST00000468039 MRPL23Q16540 153 aaKnown RBP3.59□□□□□ -1.83
U2AF1-207ENST00000468039 PSG3Q16557 428 aa3.59□□□□□ -1.83
U2AF1-207ENST00000468039 SPINK13Q1W4C9 94 aa3.59□□□□□ -1.83
U2AF1-207ENST00000468039 RPL7L1Q6DKI1 246 aaKnown RBP3.59□□□□□ -1.83
U2AF1-207ENST00000468039 EBLN2Q6P2I7 272 aa3.59□□□□□ -1.83
U2AF1-207ENST00000468039 MORN3Q6PF18 240 aaPredicted RBP3.59□□□□□ -1.83
U2AF1-207ENST00000468039 LCN15Q6UWW0 184 aa3.59□□□□□ -1.83
U2AF1-207ENST00000468039 S100A7AQ86SG5 101 aa3.59□□□□□ -1.83
U2AF1-207ENST00000468039 EXOC3-AS1Q8N2X6 119 aa3.59□□□□□ -1.83
U2AF1-207ENST00000468039 INO80EQ8NBZ0 244 aaPredicted RBP3.59□□□□□ -1.83
U2AF1-207ENST00000468039 OR10G8Q8NGN5 311 aa3.59□□□□□ -1.83
U2AF1-207ENST00000468039 OR11H2Q8NH07 326 aa3.59□□□□□ -1.83
U2AF1-207ENST00000468039 ASB13Q8WXK3 278 aa3.59□□□□□ -1.83
U2AF1-207ENST00000468039 RPUSD4Q96CM3 377 aaKnown RBP3.59□□□□□ -1.83
U2AF1-207ENST00000468039 FXYD5Q96DB9 178 aa3.59□□□□□ -1.83
U2AF1-207ENST00000468039 PARD6GQ9BYG4 376 aaPredicted RBP3.59□□□□□ -1.83
U2AF1-207ENST00000468039 MFFQ9GZY8 342 aa3.59□□□□□ -1.83
U2AF1-207ENST00000468039 ZNF331Q9NQX6 463 aaPredicted RBP3.59□□□□□ -1.83
U2AF1-207ENST00000468039 KCNIP2Q9NS61 270 aa3.59□□□□□ -1.83
U2AF1-207ENST00000468039 RPRMQ9NS64 109 aa3.59□□□□□ -1.83
U2AF1-207ENST00000468039 FUT9Q9Y231 359 aa3.59□□□□□ -1.83
U2AF1-207ENST00000468039 DNAH10Q8IVF4 4471 aa3.58□□□□□ -1.84
U2AF1-207ENST00000468039 TRBV19A0A075B6N1 114 aa3.58□□□□□ -1.84
U2AF1-207ENST00000468039 TRAV12-2A0A075B6T6 113 aa3.58□□□□□ -1.84
U2AF1-207ENST00000468039 IGHV3OR16-12A0A075B7B8 117 aa3.58□□□□□ -1.84
U2AF1-207ENST00000468039 A0A1B0GVG6 124 aa3.58□□□□□ -1.84
U2AF1-207ENST00000468039 M0R2Z0 102 aa3.58□□□□□ -1.84
U2AF1-207ENST00000468039 OR7C2O60412 319 aa3.58□□□□□ -1.84
U2AF1-207ENST00000468039 MBP02144 154 aa3.58□□□□□ -1.84
U2AF1-207ENST00000468039 CXCL2P19875 107 aa3.58□□□□□ -1.84
U2AF1-207ENST00000468039 RHOBP62745 196 aa3.58□□□□□ -1.84
U2AF1-207ENST00000468039 ZNF266Q14584 549 aa3.58□□□□□ -1.84
U2AF1-207ENST00000468039 ACOT6Q3I5F7 207 aaPredicted RBP3.58□□□□□ -1.84
U2AF1-207ENST00000468039 SAMD13Q5VXD3 122 aa3.58□□□□□ -1.84
U2AF1-207ENST00000468039 AMTNQ6UX39 209 aa3.58□□□□□ -1.84
U2AF1-207ENST00000468039 SSX7Q7RTT5 188 aa3.58□□□□□ -1.84
U2AF1-207ENST00000468039 BAP18Q8IXM2 172 aa3.58□□□□□ -1.84
U2AF1-207ENST00000468039 CSNK1G2-AS1Q8NCQ2 148 aa3.58□□□□□ -1.84
U2AF1-207ENST00000468039 OR8A1Q8NGG7 326 aa3.58□□□□□ -1.84
U2AF1-207ENST00000468039 OR10G4Q8NGN3 311 aa3.58□□□□□ -1.84
U2AF1-207ENST00000468039 OR10G9Q8NGN4 311 aa3.58□□□□□ -1.84
U2AF1-207ENST00000468039 OR10G7Q8NGN6 311 aa3.58□□□□□ -1.84
U2AF1-207ENST00000468039 PHYHIPLQ96FC7 376 aa3.58□□□□□ -1.84
U2AF1-207ENST00000468039 RARRES2Q99969 163 aa3.58□□□□□ -1.84
U2AF1-207ENST00000468039 SLC50A1Q9BRV3 221 aa3.58□□□□□ -1.84
U2AF1-207ENST00000468039 PAXXQ9BUH6 204 aa3.58□□□□□ -1.84
U2AF1-207ENST00000468039 MRPL32Q9BYC8 188 aaKnown RBP3.58□□□□□ -1.84
U2AF1-207ENST00000468039 OR51M1Q9H341 326 aa3.58□□□□□ -1.84
U2AF1-207ENST00000468039 CYTL1Q9NRR1 136 aa3.58□□□□□ -1.84
U2AF1-207ENST00000468039 TMEM14CQ9P0S9 112 aa3.58□□□□□ -1.84
U2AF1-207ENST00000468039 TP53TG1Q9Y2A0 90 aa3.58□□□□□ -1.84
U2AF1-207ENST00000468039 TIMM9Q9Y5J7 89 aa3.58□□□□□ -1.84
U2AF1-207ENST00000468039 DNAH2Q9P225 4427 aa3.58□□□□□ -1.84
U2AF1-207ENST00000468039 KMT2AQ03164 3969 aa3.57□□□□□ -1.84
U2AF1-207ENST00000468039 IGKV2-40A0A087WW87 121 aaPredicted RBP3.57□□□□□ -1.84
U2AF1-207ENST00000468039 CRXO43186 299 aaPredicted RBP3.57□□□□□ -1.84
U2AF1-207ENST00000468039 DUSP14O95147 198 aaKnown RBP3.57□□□□□ -1.84
U2AF1-207ENST00000468039 IGKV2D-40P01614 121 aaPredicted RBP3.57□□□□□ -1.84
U2AF1-207ENST00000468039 PRM2P04554 102 aa3.57□□□□□ -1.84
U2AF1-207ENST00000468039 NBEAP1P0C6P0 100 aa3.57□□□□□ -1.84
U2AF1-207ENST00000468039 RBMY1A1P0DJD3 496 aaKnown RBP3.57□□□□□ -1.84
U2AF1-207ENST00000468039 RBMY1CP0DJD4 496 aa3.57□□□□□ -1.84
U2AF1-207ENST00000468039 HIST1H1EP10412 219 aaKnown RBP3.57□□□□□ -1.84
U2AF1-207ENST00000468039 M6PRP20645 277 aa3.57□□□□□ -1.84
U2AF1-207ENST00000468039 CDC34P49427 236 aaPredicted RBP3.57□□□□□ -1.84
U2AF1-207ENST00000468039 UBE2L3P68036 154 aaKnown RBP3.57□□□□□ -1.84
U2AF1-207ENST00000468039 PSG9Q00887 426 aa3.57□□□□□ -1.84
U2AF1-207ENST00000468039 CD300CQ08708 224 aa3.57□□□□□ -1.84
U2AF1-207ENST00000468039 ERCC8Q13216 396 aa3.57□□□□□ -1.84
U2AF1-207ENST00000468039 LAGE3Q14657 143 aa3.57□□□□□ -1.84
U2AF1-207ENST00000468039 RBMY1FQ15415 496 aaKnown RBP3.57□□□□□ -1.84
U2AF1-207ENST00000468039 ZFP69Q49AA0 526 aa3.57□□□□□ -1.84
U2AF1-207ENST00000468039 ZNF767PQ75MW2 155 aa3.57□□□□□ -1.84
U2AF1-207ENST00000468039 Q8NAQ8 132 aa3.57□□□□□ -1.84
U2AF1-207ENST00000468039 OR2G3Q8NGZ4 309 aa3.57□□□□□ -1.84
U2AF1-207ENST00000468039 MUC7Q8TAX7 377 aa3.57□□□□□ -1.84
U2AF1-207ENST00000468039 C11orf52Q96A22 123 aa3.57□□□□□ -1.84
U2AF1-207ENST00000468039 TREM1Q9NP99 234 aa3.57□□□□□ -1.84
U2AF1-207ENST00000468039 RNF24Q9Y225 148 aa3.57□□□□□ -1.84
U2AF1-207ENST00000468039 IGHV4-4A0A075B6R2 117 aa3.56□□□□□ -1.84
U2AF1-207ENST00000468039 BORCS7-ASMTA0A0B4J1R7 106 aa3.56□□□□□ -1.84
U2AF1-207ENST00000468039 A8MTW9 85 aa3.56□□□□□ -1.84
U2AF1-207ENST00000468039 ZNF705EA8MWA4 302 aaPredicted RBP3.56□□□□□ -1.84
U2AF1-207ENST00000468039 BCL2L11O43521 198 aa3.56□□□□□ -1.84
U2AF1-207ENST00000468039 INSP01308 110 aa3.56□□□□□ -1.84
U2AF1-207ENST00000468039 ARL14EPLP0DKL9 152 aa3.56□□□□□ -1.84
U2AF1-207ENST00000468039 CT45A10P0DMU9 189 aa3.56□□□□□ -1.84
U2AF1-207ENST00000468039 EMP1P54849 157 aa3.56□□□□□ -1.84
U2AF1-207ENST00000468039 NUTF2P61970 127 aaKnown RBP3.56□□□□□ -1.84
U2AF1-207ENST00000468039 RANP62826 216 aaKnown RBP3.56□□□□□ -1.84
U2AF1-207ENST00000468039 PDE6HQ13956 83 aa3.56□□□□□ -1.84
U2AF1-207ENST00000468039 ZNF726P1Q15940 193 aa3.56□□□□□ -1.84
U2AF1-207ENST00000468039 GUK1Q16774 197 aa3.56□□□□□ -1.84
U2AF1-207ENST00000468039 KHDC3LQ587J8 217 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms