RNA–Protein interactions for RNA: ENST00000466854.5

CCDC58-203, Transcript of coiled-coil domain containing 58, humanhuman

TSL 3

Gene CCDC58, Length 769 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-203ENST00000466854 C8orf17Q9NRJ1 99 aa2.29□□□□□ -2.04
CCDC58-203ENST00000466854 C21orf62Q9NYP8 219 aa2.29□□□□□ -2.04
CCDC58-203ENST00000466854 ZNF407Q9C0G0 2248 aa2.29□□□□□ -2.04
CCDC58-203ENST00000466854 CUBNO60494 3623 aa2.29□□□□□ -2.04
CCDC58-203ENST00000466854 PNMA8CA0A1B0GUJ8 204 aa2.28□□□□□ -2.04
CCDC58-203ENST00000466854 LOC107986453A0A1B0GWG9 222 aa2.28□□□□□ -2.04
CCDC58-203ENST00000466854 OR51F1A6NGY5 319 aa2.28□□□□□ -2.04
CCDC58-203ENST00000466854 OR2T8A6NH00 312 aa2.28□□□□□ -2.04
CCDC58-203ENST00000466854 H3BMG7 143 aa2.28□□□□□ -2.04
CCDC58-203ENST00000466854 K7ERJ3 54 aa2.28□□□□□ -2.04
CCDC58-203ENST00000466854 GEMIN2O14893 280 aaKnown RBP2.28□□□□□ -2.04
CCDC58-203ENST00000466854 SNRNP200O75643 2136 aaKnown RBP2.28□□□□□ -2.04
CCDC58-203ENST00000466854 IGKV1-16P04430 117 aa2.28□□□□□ -2.04
CCDC58-203ENST00000466854 FABP2P12104 132 aa2.28□□□□□ -2.04
CCDC58-203ENST00000466854 IL7P13232 177 aa2.28□□□□□ -2.04
CCDC58-203ENST00000466854 HLA-DRB4P13762 266 aa2.28□□□□□ -2.04
CCDC58-203ENST00000466854 LGALS3P17931 250 aaKnown RBP2.28□□□□□ -2.04
CCDC58-203ENST00000466854 HIST1H2BOP23527 126 aa2.28□□□□□ -2.04
CCDC58-203ENST00000466854 HIST1H2BBP33778 126 aa2.28□□□□□ -2.04
CCDC58-203ENST00000466854 ARPP19P56211 112 aa2.28□□□□□ -2.04
CCDC58-203ENST00000466854 CMC4P56277 68 aaPredicted RBP2.28□□□□□ -2.04
CCDC58-203ENST00000466854 HIST1H2BDP58876 126 aa2.28□□□□□ -2.04
CCDC58-203ENST00000466854 HIST1H2BCP62807 126 aa2.28□□□□□ -2.04
CCDC58-203ENST00000466854 ATP5G2Q06055 141 aa2.28□□□□□ -2.04
CCDC58-203ENST00000466854 HIST2H2BEQ16778 126 aa2.28□□□□□ -2.04
CCDC58-203ENST00000466854 HIST2H2BFQ5QNW6 126 aaPredicted RBP2.28□□□□□ -2.04
CCDC58-203ENST00000466854 AADACL3Q5VUY0 350 aa2.28□□□□□ -2.04
CCDC58-203ENST00000466854 IGFL3Q6UXB1 125 aa2.28□□□□□ -2.04
CCDC58-203ENST00000466854 IZUMO2Q6UXV1 221 aa2.28□□□□□ -2.04
CCDC58-203ENST00000466854 TMEM91Q6ZNR0 172 aa2.28□□□□□ -2.04
CCDC58-203ENST00000466854 Q6ZUT4 128 aa2.28□□□□□ -2.04
CCDC58-203ENST00000466854 RNF182Q8N6D2 247 aa2.28□□□□□ -2.04
CCDC58-203ENST00000466854 C15orf56Q8N910 161 aa2.28□□□□□ -2.04
CCDC58-203ENST00000466854 Q8N9L7 120 aa2.28□□□□□ -2.04
CCDC58-203ENST00000466854 MORN4Q8NDC4 146 aa2.28□□□□□ -2.04
CCDC58-203ENST00000466854 OR4A5Q8NH83 315 aa2.28□□□□□ -2.04
CCDC58-203ENST00000466854 OTOSQ8NHW6 89 aa2.28□□□□□ -2.04
CCDC58-203ENST00000466854 HIST1H2BHQ93079 126 aa2.28□□□□□ -2.04
CCDC58-203ENST00000466854 LINC00526Q96FQ7 95 aa2.28□□□□□ -2.04
CCDC58-203ENST00000466854 HIST1H2BNQ99877 126 aa2.28□□□□□ -2.04
CCDC58-203ENST00000466854 HIST1H2BMQ99879 126 aa2.28□□□□□ -2.04
CCDC58-203ENST00000466854 RERGLQ9H628 205 aa2.28□□□□□ -2.04
CCDC58-203ENST00000466854 CKLFQ9UBR5 152 aa2.28□□□□□ -2.04
CCDC58-203ENST00000466854 LSM2Q9Y333 95 aaKnown RBP2.28□□□□□ -2.04
CCDC58-203ENST00000466854 DNAJC15Q9Y5T4 150 aa2.28□□□□□ -2.04
CCDC58-203ENST00000466854 CHCHD2Q9Y6H1 151 aaPredicted RBP2.28□□□□□ -2.04
CCDC58-203ENST00000466854 HLA-DRB4X5D2U9 266 aa2.28□□□□□ -2.04
CCDC58-203ENST00000466854 ZFC3H1O60293 1989 aaKnown RBP2.28□□□□□ -2.04
CCDC58-203ENST00000466854 ZNF469Q96JG9 3925 aaPredicted RBP2.28□□□□□ -2.04
CCDC58-203ENST00000466854 CSPG4Q6UVK1 2322 aa2.28□□□□□ -2.05
CCDC58-203ENST00000466854 SCN8AQ9UQD0 1980 aa2.27□□□□□ -2.05
CCDC58-203ENST00000466854 TRAV12-2A0A075B6T6 113 aa2.27□□□□□ -2.05
CCDC58-203ENST00000466854 TRAV19A0A0A6YYK7 116 aa2.27□□□□□ -2.05
CCDC58-203ENST00000466854 A0A0J9YW62 118 aa2.27□□□□□ -2.05
CCDC58-203ENST00000466854 A8MWV9 139 aa2.27□□□□□ -2.05
CCDC58-203ENST00000466854 CST7O76096 145 aa2.27□□□□□ -2.05
CCDC58-203ENST00000466854 GABARAPO95166 117 aa2.27□□□□□ -2.05
CCDC58-203ENST00000466854 NDUFB2O95178 105 aa2.27□□□□□ -2.05
CCDC58-203ENST00000466854 SOD1P00441 154 aa2.27□□□□□ -2.05
CCDC58-203ENST00000466854 MT-ATP8P03928 68 aa2.27□□□□□ -2.05
CCDC58-203ENST00000466854 ZNF705DP0CH99 300 aaPredicted RBP2.27□□□□□ -2.05
CCDC58-203ENST00000466854 CRYGAP11844 174 aa2.27□□□□□ -2.05
CCDC58-203ENST00000466854 DYNLT3P51808 116 aa2.27□□□□□ -2.05
CCDC58-203ENST00000466854 HBBP68871 147 aa2.27□□□□□ -2.05
CCDC58-203ENST00000466854 HES1Q14469 280 aa2.27□□□□□ -2.05
CCDC58-203ENST00000466854 MPV17L2Q567V2 206 aa2.27□□□□□ -2.05
CCDC58-203ENST00000466854 SPRNQ5BIV9 151 aa2.27□□□□□ -2.05
CCDC58-203ENST00000466854 RNASE13Q5GAN3 156 aaKnown RBP2.27□□□□□ -2.05
CCDC58-203ENST00000466854 GUSBP11Q6P575 273 aa2.27□□□□□ -2.05
CCDC58-203ENST00000466854 Q6ZS52 159 aa2.27□□□□□ -2.05
CCDC58-203ENST00000466854 SCXQ7RTU7 201 aa2.27□□□□□ -2.05
CCDC58-203ENST00000466854 ADM2Q7Z4H4 148 aa2.27□□□□□ -2.05
CCDC58-203ENST00000466854 C10orf111Q8N326 155 aa2.27□□□□□ -2.05
CCDC58-203ENST00000466854 C10orf126Q8N4M7 172 aa2.27□□□□□ -2.05
CCDC58-203ENST00000466854 KCNRGQ8N5I3 272 aa2.27□□□□□ -2.05
CCDC58-203ENST00000466854 C3orf56Q8N813 242 aa2.27□□□□□ -2.05
CCDC58-203ENST00000466854 OR8A1Q8NGG7 326 aa2.27□□□□□ -2.05
CCDC58-203ENST00000466854 SHANK2-AS3Q9BTD1 123 aa2.27□□□□□ -2.05
CCDC58-203ENST00000466854 AGPAT4-IT1Q9H0P7 198 aa2.27□□□□□ -2.05
CCDC58-203ENST00000466854 IL36BQ9NZH7 164 aa2.27□□□□□ -2.05
CCDC58-203ENST00000466854 KLK12Q9UKR0 248 aa2.27□□□□□ -2.05
CCDC58-203ENST00000466854 TRPM6Q9BX84 2022 aa2.27□□□□□ -2.05
CCDC58-203ENST00000466854 TANC2Q9HCD6 1990 aa2.27□□□□□ -2.05
CCDC58-203ENST00000466854 NSD1Q96L73 2696 aaPredicted RBP2.26□□□□□ -2.05
CCDC58-203ENST00000466854 TACC2O95359 2948 aa2.26□□□□□ -2.05
CCDC58-203ENST00000466854 IGLV3-9A0A075B6K5 115 aa2.26□□□□□ -2.05
CCDC58-203ENST00000466854 TRGV10A0A0A0MS01 117 aa2.26□□□□□ -2.05
CCDC58-203ENST00000466854 IGHV3-43A0A0B4J1X8 118 aa2.26□□□□□ -2.05
CCDC58-203ENST00000466854 IGHV1OR15-9A0A0B4J2B8 117 aa2.26□□□□□ -2.05
CCDC58-203ENST00000466854 A0A1B0GVX0 72 aa2.26□□□□□ -2.05
CCDC58-203ENST00000466854 TCRBV3S1A0A5B6 114 aa2.26□□□□□ -2.05
CCDC58-203ENST00000466854 OOSP1A8MZH6 123 aa2.26□□□□□ -2.05
CCDC58-203ENST00000466854 TMEM262E9PQX1 116 aa2.26□□□□□ -2.05
CCDC58-203ENST00000466854 C19orf84I3L1E1 186 aa2.26□□□□□ -2.05
CCDC58-203ENST00000466854 UQCRQO14949 82 aa2.26□□□□□ -2.05
CCDC58-203ENST00000466854 RER1O15258 196 aa2.26□□□□□ -2.05
CCDC58-203ENST00000466854 IGHV3-11P01762 117 aa2.26□□□□□ -2.05
CCDC58-203ENST00000466854 PRM2P04554 102 aa2.26□□□□□ -2.05
CCDC58-203ENST00000466854 OR5AC1P0C628 307 aa2.26□□□□□ -2.05
CCDC58-203ENST00000466854 PYYP10082 97 aa2.26□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 92.4 ms