RNA–Protein interactions for RNA: ENST00000450251.5

USP53-202, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP53, Length 6,072 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-202ENST00000450251 PAX4O43316 350 aa1.73□□□□□ -2.13
USP53-202ENST00000450251 EGR2P11161 476 aaPredicted RBP1.73□□□□□ -2.13
USP53-202ENST00000450251 FXYD7P58549 80 aa1.73□□□□□ -2.13
USP53-202ENST00000450251 DEFB121Q5J5C9 76 aa1.73□□□□□ -2.13
USP53-202ENST00000450251 C20orf197Q8N268 126 aa1.73□□□□□ -2.13
USP53-202ENST00000450251 PATE1Q8WXA2 126 aa1.73□□□□□ -2.13
USP53-202ENST00000450251 FAM167A-AS1Q96KT0 104 aa1.73□□□□□ -2.13
USP53-202ENST00000450251 DEFB118Q96PH6 123 aa1.73□□□□□ -2.13
USP53-202ENST00000450251 PRR15LQ9BU68 103 aa1.73□□□□□ -2.13
USP53-202ENST00000450251 TRIP12Q14669 1992 aaPredicted RBP1.72□□□□□ -2.13
USP53-202ENST00000450251 NUP214P35658 2090 aaPredicted RBP1.72□□□□□ -2.13
USP53-202ENST00000450251 CEP295Q9C0D2 2601 aa1.72□□□□□ -2.13
USP53-202ENST00000450251 COX7A1P24310 79 aa1.72□□□□□ -2.13
USP53-202ENST00000450251 HAMPP81172 84 aa1.72□□□□□ -2.13
USP53-202ENST00000450251 TMEM61Q8N0U2 210 aa1.72□□□□□ -2.13
USP53-202ENST00000450251 CCL13Q99616 98 aa1.72□□□□□ -2.13
USP53-202ENST00000450251 UNC79Q9P2D8 2635 aa1.72□□□□□ -2.13
USP53-202ENST00000450251 IGHV3-21A0A0B4J1V1 117 aa1.72□□□□□ -2.13
USP53-202ENST00000450251 SRRM4A7MD48 611 aaKnown RBP1.72□□□□□ -2.13
USP53-202ENST00000450251 F8WEM9 126 aa1.72□□□□□ -2.13
USP53-202ENST00000450251 H0Y8X5 98 aa1.72□□□□□ -2.13
USP53-202ENST00000450251 HOXB4P17483 251 aaPredicted RBP1.72□□□□□ -2.13
USP53-202ENST00000450251 RPL35AP18077 110 aaKnown RBP1.72□□□□□ -2.13
USP53-202ENST00000450251 NSUN5P1Q3KNT7 163 aa1.72□□□□□ -2.13
USP53-202ENST00000450251 GDF5OSQ5U4N7 250 aa1.72□□□□□ -2.13
USP53-202ENST00000450251 Q6ZT83 130 aa1.72□□□□□ -2.13
USP53-202ENST00000450251 WFDC11Q8NEX6 87 aa1.72□□□□□ -2.13
USP53-202ENST00000450251 TTTY12Q9BZ98 90 aa1.72□□□□□ -2.13
USP53-202ENST00000450251 PRO0461Q9UI25 63 aa1.72□□□□□ -2.13
USP53-202ENST00000450251 NCKAP5O14513 1909 aa1.72□□□□□ -2.13
USP53-202ENST00000450251 TMEM223A0PJW6 202 aa1.72□□□□□ -2.13
USP53-202ENST00000450251 TGFBR3LH3BV60 316 aa1.72□□□□□ -2.13
USP53-202ENST00000450251 H7C423 109 aa1.72□□□□□ -2.13
USP53-202ENST00000450251 TRIAP1O43715 76 aa1.72□□□□□ -2.13
USP53-202ENST00000450251 IGFBP4P22692 258 aa1.72□□□□□ -2.13
USP53-202ENST00000450251 IGFBP6P24592 240 aaPredicted RBP1.72□□□□□ -2.13
USP53-202ENST00000450251 HIST2H2BCQ6DN03 193 aa1.72□□□□□ -2.13
USP53-202ENST00000450251 HIST2H2BDQ6DRA6 164 aa1.72□□□□□ -2.13
USP53-202ENST00000450251 ZFP2Q6ZN57 461 aa1.72□□□□□ -2.13
USP53-202ENST00000450251 SDIM1Q6ZPB5 146 aa1.72□□□□□ -2.13
USP53-202ENST00000450251 PIP4P1Q86T03 277 aa1.72□□□□□ -2.13
USP53-202ENST00000450251 WFDC9Q8NEX5 89 aa1.72□□□□□ -2.13
USP53-202ENST00000450251 DEFB127Q9H1M4 99 aa1.72□□□□□ -2.13
USP53-202ENST00000450251 PYGO1Q9Y3Y4 419 aa1.72□□□□□ -2.13
USP53-202ENST00000450251 KIF26BQ2KJY2 2108 aa1.72□□□□□ -2.13
USP53-202ENST00000450251 IGHV3-64A0A075B6Q5 118 aa1.72□□□□□ -2.13
USP53-202ENST00000450251 EFNA4P52798 201 aa1.72□□□□□ -2.13
USP53-202ENST00000450251 RPL36AP83881 106 aaKnown RBP1.72□□□□□ -2.13
USP53-202ENST00000450251 DAZ4Q86SG3 579 aaKnown RBP1.72□□□□□ -2.13
USP53-202ENST00000450251 RPL36ALQ969Q0 106 aaKnown RBP1.72□□□□□ -2.13
USP53-202ENST00000450251 ZFAND3Q9H8U3 227 aa1.72□□□□□ -2.13
USP53-202ENST00000450251 DAZ3Q9NR90 486 aaKnown RBP1.72□□□□□ -2.13
USP53-202ENST00000450251 ZFHX4Q86UP3 3567 aa1.72□□□□□ -2.13
USP53-202ENST00000450251 A0A0U1RRA0 63 aa1.71□□□□□ -2.13
USP53-202ENST00000450251 MIFP14174 115 aa1.71□□□□□ -2.13
USP53-202ENST00000450251 CCL3L1P16619 93 aa1.71□□□□□ -2.13
USP53-202ENST00000450251 HOXD3P31249 432 aaPredicted RBP1.71□□□□□ -2.13
USP53-202ENST00000450251 UBE2E1P51965 193 aa1.71□□□□□ -2.13
USP53-202ENST00000450251 ZNF134P52741 427 aa1.71□□□□□ -2.13
USP53-202ENST00000450251 PCOLCEQ15113 449 aa1.71□□□□□ -2.13
USP53-202ENST00000450251 ZNF876PQ49A33 203 aa1.71□□□□□ -2.13
USP53-202ENST00000450251 KHDC1LQ5JSQ8 128 aa1.71□□□□□ -2.13
USP53-202ENST00000450251 MINOS1Q5TGZ0 78 aa1.71□□□□□ -2.13
USP53-202ENST00000450251 NFE4Q86UQ8 179 aa1.71□□□□□ -2.13
USP53-202ENST00000450251 DPM3Q9P2X0 92 aa1.71□□□□□ -2.13
USP53-202ENST00000450251 MINOS1-NBL1R4GNA1 71 aa1.71□□□□□ -2.13
USP53-202ENST00000450251 MBD3L4A6NDZ8 208 aaPredicted RBP1.71□□□□□ -2.14
USP53-202ENST00000450251 MBD3L3A6NE82 208 aaPredicted RBP1.71□□□□□ -2.14
USP53-202ENST00000450251 MBD3L5A6NJ08 208 aaPredicted RBP1.71□□□□□ -2.14
USP53-202ENST00000450251 CCL4P13236 92 aa1.71□□□□□ -2.14
USP53-202ENST00000450251 CCL5P13501 91 aa1.71□□□□□ -2.14
USP53-202ENST00000450251 MYCNOSP40205 109 aa1.71□□□□□ -2.14
USP53-202ENST00000450251 INSL3P51460 131 aa1.71□□□□□ -2.14
USP53-202ENST00000450251 ATG2AQ2TAZ0 1938 aa1.71□□□□□ -2.14
USP53-202ENST00000450251 BEAN1Q3B7T3 259 aa1.71□□□□□ -2.14
USP53-202ENST00000450251 ARTNQ5T4W7 220 aa1.71□□□□□ -2.14
USP53-202ENST00000450251 FANCMQ8IYD8 2048 aa1.71□□□□□ -2.14
USP53-202ENST00000450251 C14orf178Q8N769 122 aaPredicted RBP1.71□□□□□ -2.14
USP53-202ENST00000450251 C3orf56Q8N813 242 aa1.71□□□□□ -2.14
USP53-202ENST00000450251 MUC7Q8TAX7 377 aa1.71□□□□□ -2.14
USP53-202ENST00000450251 CLEC2BQ92478 149 aa1.71□□□□□ -2.14
USP53-202ENST00000450251 AJUBAQ96IF1 538 aa1.71□□□□□ -2.14
USP53-202ENST00000450251 SCN5AQ14524 2016 aa1.71□□□□□ -2.14
USP53-202ENST00000450251 VWA8A3KMH1 1905 aa1.71□□□□□ -2.14
USP53-202ENST00000450251 A0A0G2JNJ9 132 aa1.71□□□□□ -2.14
USP53-202ENST00000450251 PRR19A6NJB7 356 aa1.71□□□□□ -2.14
USP53-202ENST00000450251 NDUFA1O15239 70 aa1.71□□□□□ -2.14
USP53-202ENST00000450251 IGHV3-13P01766 116 aa1.71□□□□□ -2.14
USP53-202ENST00000450251 SS18Q15532 418 aa1.71□□□□□ -2.14
USP53-202ENST00000450251 C15orf32Q32M92 178 aa1.71□□□□□ -2.14
USP53-202ENST00000450251 C20orf204Q6ZNR8 217 aa1.71□□□□□ -2.14
USP53-202ENST00000450251 IMMP1LQ96LU5 166 aa1.71□□□□□ -2.14
USP53-202ENST00000450251 Q9UFV3 132 aa1.71□□□□□ -2.14
USP53-202ENST00000450251 THADAQ6YHU6 1953 aa1.71□□□□□ -2.14
USP53-202ENST00000450251 ERC2-IT1O76042 136 aa1.71□□□□□ -2.14
USP53-202ENST00000450251 CCKP06307 115 aa1.71□□□□□ -2.14
USP53-202ENST00000450251 CD24P25063 80 aa1.71□□□□□ -2.14
USP53-202ENST00000450251 GATA4P43694 442 aa1.71□□□□□ -2.14
USP53-202ENST00000450251 XCL1P47992 114 aa1.71□□□□□ -2.14
USP53-202ENST00000450251 TRIP6Q15654 476 aaKnown RBP1.71□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 89.9 ms