RNA–Protein interactions for RNA: ENST00000448520.5

PDLIM2-213, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-213ENST00000448520 SLC7A5P1Q8MH63 180 aa9.8□□□□□ -0.84
PDLIM2-213ENST00000448520 C1orf158Q8N1D5 194 aa9.8□□□□□ -0.84
PDLIM2-213ENST00000448520 NDFIP1Q9BT67 221 aa9.8□□□□□ -0.84
PDLIM2-213ENST00000448520 IGHV3OR16-12A0A075B7B8 117 aa9.79□□□□□ -0.84
PDLIM2-213ENST00000448520 TEX48A0A1B0GUV7 120 aa9.79□□□□□ -0.84
PDLIM2-213ENST00000448520 C7orf71A4D174 169 aa9.79□□□□□ -0.84
PDLIM2-213ENST00000448520 ZNF727A8MUV8 499 aa9.79□□□□□ -0.84
PDLIM2-213ENST00000448520 S100A9P06702 114 aaKnown RBP9.79□□□□□ -0.84
PDLIM2-213ENST00000448520 GNG4P50150 75 aa9.79□□□□□ -0.84
PDLIM2-213ENST00000448520 TAS2R60P59551 318 aa9.79□□□□□ -0.84
PDLIM2-213ENST00000448520 LGALS9BQ3B8N2 356 aa9.79□□□□□ -0.84
PDLIM2-213ENST00000448520 TMEM183AQ8IXX5 376 aa9.79□□□□□ -0.84
PDLIM2-213ENST00000448520 SMIM7Q9BQ49 75 aa9.79□□□□□ -0.84
PDLIM2-213ENST00000448520 LENEPQ9Y5L5 61 aa9.79□□□□□ -0.84
PDLIM2-213ENST00000448520 FBLL1A6NHQ2 334 aaKnown RBP9.78□□□□□ -0.84
PDLIM2-213ENST00000448520 NDUFS6O75380 124 aaKnown RBP9.78□□□□□ -0.84
PDLIM2-213ENST00000448520 GCGP01275 180 aa9.78□□□□□ -0.84
PDLIM2-213ENST00000448520 INSP01308 110 aa9.78□□□□□ -0.84
PDLIM2-213ENST00000448520 MGST1P10620 155 aaKnown RBP9.78□□□□□ -0.84
PDLIM2-213ENST00000448520 CRIP1P50238 77 aa9.78□□□□□ -0.84
PDLIM2-213ENST00000448520 SAPCD1Q5SSQ6 148 aa9.78□□□□□ -0.84
PDLIM2-213ENST00000448520 OCC1Q8TAD7 63 aa9.78□□□□□ -0.84
PDLIM2-213ENST00000448520 MLST8Q9BVC4 326 aa9.78□□□□□ -0.84
PDLIM2-213ENST00000448520 ZFP30Q9Y2G7 519 aa9.78□□□□□ -0.84
PDLIM2-213ENST00000448520 TRBV7-9A0A0J9YWB2 115 aa9.77□□□□□ -0.85
PDLIM2-213ENST00000448520 A0A1B0GVY2 172 aa9.77□□□□□ -0.85
PDLIM2-213ENST00000448520 PRSS29PA6NIE9 313 aa9.77□□□□□ -0.85
PDLIM2-213ENST00000448520 K7EN84 100 aa9.77□□□□□ -0.85
PDLIM2-213ENST00000448520 MED14OSP0DP75 135 aa9.77□□□□□ -0.85
PDLIM2-213ENST00000448520 ADCYAP1P18509 176 aa9.77□□□□□ -0.85
PDLIM2-213ENST00000448520 OR5I1Q13606 314 aa9.77□□□□□ -0.85
PDLIM2-213ENST00000448520 SMUG1Q53HV7 270 aa9.77□□□□□ -0.85
PDLIM2-213ENST00000448520 SOHLH1Q5JUK2 328 aa9.77□□□□□ -0.85
PDLIM2-213ENST00000448520 MUC21Q5SSG8 566 aa9.77□□□□□ -0.85
PDLIM2-213ENST00000448520 PRR27Q6MZM9 219 aa9.77□□□□□ -0.85
PDLIM2-213ENST00000448520 UQCC3Q6UW78 93 aa9.77□□□□□ -0.85
PDLIM2-213ENST00000448520 SMDT1Q9H4I9 107 aa9.77□□□□□ -0.85
PDLIM2-213ENST00000448520 C11orf21Q9P2W6 132 aa9.77□□□□□ -0.85
PDLIM2-213ENST00000448520 C9JCJ5 164 aa9.76□□□□□ -0.85
PDLIM2-213ENST00000448520 SH2D1AO60880 128 aa9.76□□□□□ -0.85
PDLIM2-213ENST00000448520 ZNF324O75467 553 aaPredicted RBP9.76□□□□□ -0.85
PDLIM2-213ENST00000448520 EMP1P54849 157 aa9.76□□□□□ -0.85
PDLIM2-213ENST00000448520 EIF4E3Q8N5X7 224 aaKnown RBP9.76□□□□□ -0.85
PDLIM2-213ENST00000448520 NIPSNAP3BQ9BS92 247 aa9.76□□□□□ -0.85
PDLIM2-213ENST00000448520 DKK2Q9UBU2 259 aa9.76□□□□□ -0.85
PDLIM2-213ENST00000448520 NAGKQ9UJ70 344 aa9.76□□□□□ -0.85
PDLIM2-213ENST00000448520 GOLT1BQ9Y3E0 138 aa9.76□□□□□ -0.85
PDLIM2-213ENST00000448520 TMEM218A2RU14 115 aa9.75□□□□□ -0.85
PDLIM2-213ENST00000448520 ZNF705GA8MUZ8 300 aaPredicted RBP9.75□□□□□ -0.85
PDLIM2-213ENST00000448520 HTN1P15515 57 aa9.75□□□□□ -0.85
PDLIM2-213ENST00000448520 Q6AWC8 147 aa9.75□□□□□ -0.85
PDLIM2-213ENST00000448520 COX8CQ7Z4L0 72 aa9.75□□□□□ -0.85
PDLIM2-213ENST00000448520 LINC01587Q99440 93 aa9.75□□□□□ -0.85
PDLIM2-213ENST00000448520 M0R036 132 aa9.74□□□□□ -0.85
PDLIM2-213ENST00000448520 M0R2N4 97 aa9.74□□□□□ -0.85
PDLIM2-213ENST00000448520 RTL8CO15255 209 aa9.74□□□□□ -0.85
PDLIM2-213ENST00000448520 RNF212Q495C1 297 aa9.74□□□□□ -0.85
PDLIM2-213ENST00000448520 UBE2DNLQ8IWF7 75 aa9.74□□□□□ -0.85
PDLIM2-213ENST00000448520 TMEM208Q9BTX3 173 aa9.74□□□□□ -0.85
PDLIM2-213ENST00000448520 TP53TG3Q9ULZ0 132 aa9.74□□□□□ -0.85
PDLIM2-213ENST00000448520 DNAH17Q9UFH2 4485 aa9.74□□□□□ -0.85
PDLIM2-213ENST00000448520 FAT2Q9NYQ8 4349 aa9.73□□□□□ -0.85
PDLIM2-213ENST00000448520 TRAV21A0A0B4J279 112 aa9.73□□□□□ -0.85
PDLIM2-213ENST00000448520 PFN1P07737 140 aaKnown RBP9.73□□□□□ -0.85
PDLIM2-213ENST00000448520 AZU1P20160 251 aa9.73□□□□□ -0.85
PDLIM2-213ENST00000448520 RPL23P62829 140 aaKnown RBP9.73□□□□□ -0.85
PDLIM2-213ENST00000448520 RPL19P84098 196 aaKnown RBP9.73□□□□□ -0.85
PDLIM2-213ENST00000448520 TMEM241Q24JQ0 296 aa9.73□□□□□ -0.85
PDLIM2-213ENST00000448520 ANXA2RQ3ZCQ2 193 aa9.73□□□□□ -0.85
PDLIM2-213ENST00000448520 FAM74A3Q4VXF1 159 aa9.73□□□□□ -0.85
PDLIM2-213ENST00000448520 FAM222AQ5U5X8 452 aa9.73□□□□□ -0.85
PDLIM2-213ENST00000448520 LINC01551Q86U37 167 aa9.73□□□□□ -0.85
PDLIM2-213ENST00000448520 NAT8Q9UHE5 227 aa9.73□□□□□ -0.85
PDLIM2-213ENST00000448520 PKHD1P08F94 4074 aa9.73□□□□□ -0.85
PDLIM2-213ENST00000448520 KIAA1109Q2LD37 5005 aa9.73□□□□□ -0.85
PDLIM2-213ENST00000448520 DNAH2Q9P225 4427 aa9.72□□□□□ -0.85
PDLIM2-213ENST00000448520 TMSB15BA0A087X1C1 80 aa9.72□□□□□ -0.85
PDLIM2-213ENST00000448520 IGKV3D-20A0A0C4DH25 116 aa9.72□□□□□ -0.85
PDLIM2-213ENST00000448520 F8W036 122 aa9.72□□□□□ -0.85
PDLIM2-213ENST00000448520 ADIRFQ15847 76 aa9.72□□□□□ -0.85
PDLIM2-213ENST00000448520 RRN3P1Q2M238 152 aa9.72□□□□□ -0.85
PDLIM2-213ENST00000448520 FAM162BQ5T6X4 162 aa9.72□□□□□ -0.85
PDLIM2-213ENST00000448520 RNASE7Q9H1E1 156 aaKnown RBP9.72□□□□□ -0.85
PDLIM2-213ENST00000448520 SDF2L1Q9HCN8 221 aa9.72□□□□□ -0.85
PDLIM2-213ENST00000448520 IGHV1OR15-1A0A075B7D0 117 aa9.71□□□□□ -0.86
PDLIM2-213ENST00000448520 C19orf71A6NCJ1 209 aa9.71□□□□□ -0.86
PDLIM2-213ENST00000448520 FABP5P3A8MUU1 101 aa9.71□□□□□ -0.86
PDLIM2-213ENST00000448520 H7BYZ3 331 aa9.71□□□□□ -0.86
PDLIM2-213ENST00000448520 GNRH2O43555 120 aa9.71□□□□□ -0.86
PDLIM2-213ENST00000448520 NDUFA5Q16718 116 aa9.71□□□□□ -0.86
PDLIM2-213ENST00000448520 Q6ZR54 194 aa9.71□□□□□ -0.86
PDLIM2-213ENST00000448520 SMIM12Q96EX1 92 aa9.71□□□□□ -0.86
PDLIM2-213ENST00000448520 C20orf144Q9BQM9 153 aa9.71□□□□□ -0.86
PDLIM2-213ENST00000448520 LY96Q9Y6Y9 160 aa9.71□□□□□ -0.86
PDLIM2-213ENST00000448520 GRIFINA4D1Z8 144 aa9.7□□□□□ -0.86
PDLIM2-213ENST00000448520 ORM1P02763 201 aa9.7□□□□□ -0.86
PDLIM2-213ENST00000448520 TYMSP04818 313 aa9.7□□□□□ -0.86
PDLIM2-213ENST00000448520 FAM3BP58499 235 aaPredicted RBP9.7□□□□□ -0.86
PDLIM2-213ENST00000448520 TMEM256Q8N2U0 113 aa9.7□□□□□ -0.86
PDLIM2-213ENST00000448520 NUDT10Q8NFP7 164 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms