RNA–Protein interactions for RNA: ENST00000448416.6

SYNPO2-204, Transcript of synaptopodin 2, humanhuman

TSL 2 BASIC

Gene SYNPO2, Length 4,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-204ENST00000448416 PSMG3-AS1Q96PY0 264 aa7.24□□□□□ -1.25
SYNPO2-204ENST00000448416 ROS1P08922 2347 aa7.24□□□□□ -1.25
SYNPO2-204ENST00000448416 SUMO2P61956 95 aaKnown RBP7.24□□□□□ -1.25
SYNPO2-204ENST00000448416 PRB3Q04118 309 aaPredicted RBP7.24□□□□□ -1.25
SYNPO2-204ENST00000448416 ATXN8Q156A1 80 aa7.24□□□□□ -1.25
SYNPO2-204ENST00000448416 ZNF672Q499Z4 452 aaPredicted RBP7.24□□□□□ -1.25
SYNPO2-204ENST00000448416 A4D1N5 150 aa7.24□□□□□ -1.25
SYNPO2-204ENST00000448416 H3BMM0 161 aa7.24□□□□□ -1.25
SYNPO2-204ENST00000448416 IGHG4P01861 327 aa7.24□□□□□ -1.25
SYNPO2-204ENST00000448416 UBE2WQ96B02 151 aa7.24□□□□□ -1.25
SYNPO2-204ENST00000448416 C11orf21Q9P2W6 132 aa7.24□□□□□ -1.25
SYNPO2-204ENST00000448416 C11orf86A6NJI1 115 aa7.23□□□□□ -1.25
SYNPO2-204ENST00000448416 IGHV3-33P01772 117 aa7.23□□□□□ -1.25
SYNPO2-204ENST00000448416 DLX1P56177 255 aa7.23□□□□□ -1.25
SYNPO2-204ENST00000448416 TCF15Q12870 199 aa7.23□□□□□ -1.25
SYNPO2-204ENST00000448416 BEX4Q9NWD9 120 aaPredicted RBP7.23□□□□□ -1.25
SYNPO2-204ENST00000448416 C21orf62Q9NYP8 219 aa7.23□□□□□ -1.25
SYNPO2-204ENST00000448416 TIMM23O14925 209 aa7.23□□□□□ -1.25
SYNPO2-204ENST00000448416 ATP5J2P56134 94 aa7.23□□□□□ -1.25
SYNPO2-204ENST00000448416 ZNF56Q15929 161 aa7.23□□□□□ -1.25
SYNPO2-204ENST00000448416 LYPD2Q6UXB3 125 aa7.23□□□□□ -1.25
SYNPO2-204ENST00000448416 PRAC2D3DTV9 90 aa7.23□□□□□ -1.25
SYNPO2-204ENST00000448416 IGHV1-8P0DP01 117 aa7.23□□□□□ -1.25
SYNPO2-204ENST00000448416 MFAP4P55083 255 aa7.23□□□□□ -1.25
SYNPO2-204ENST00000448416 CACNA1GO43497 2377 aa7.23□□□□□ -1.25
SYNPO2-204ENST00000448416 IGHV1-3A0A0C4DH29 117 aa7.22□□□□□ -1.25
SYNPO2-204ENST00000448416 J3KRW8 73 aa7.22□□□□□ -1.25
SYNPO2-204ENST00000448416 LGALS9O00182 355 aa7.22□□□□□ -1.25
SYNPO2-204ENST00000448416 RPL13AP40429 203 aaKnown RBP7.22□□□□□ -1.25
SYNPO2-204ENST00000448416 SLC50A1Q9BRV3 221 aa7.22□□□□□ -1.25
SYNPO2-204ENST00000448416 PAPPA-AS1Q5QFB9 102 aa7.22□□□□□ -1.25
SYNPO2-204ENST00000448416 TMEM170BQ5T4T1 132 aa7.22□□□□□ -1.25
SYNPO2-204ENST00000448416 SMAD5-AS1Q9Y6J3 95 aa7.22□□□□□ -1.25
SYNPO2-204ENST00000448416 IGHV7-4-1A0A0J9YVY3 117 aa7.22□□□□□ -1.25
SYNPO2-204ENST00000448416 P0DMU3 169 aa7.22□□□□□ -1.25
SYNPO2-204ENST00000448416 FAM231AP0DMU4 169 aa7.22□□□□□ -1.25
SYNPO2-204ENST00000448416 FAM231CP0DMU5 169 aa7.22□□□□□ -1.25
SYNPO2-204ENST00000448416 PMS2CLQ68D20 193 aa7.22□□□□□ -1.25
SYNPO2-204ENST00000448416 LINC01587Q99440 93 aa7.22□□□□□ -1.25
SYNPO2-204ENST00000448416 TPRP12270 2363 aaKnown RBP7.22□□□□□ -1.25
SYNPO2-204ENST00000448416 IGHV3OR16-8A0A075B7F1 116 aa7.21□□□□□ -1.25
SYNPO2-204ENST00000448416 TRBV10-2A0A0K0K1G8 114 aa7.21□□□□□ -1.25
SYNPO2-204ENST00000448416 NRGNQ92686 78 aa7.21□□□□□ -1.25
SYNPO2-204ENST00000448416 DUSP14O95147 198 aaKnown RBP7.21□□□□□ -1.25
SYNPO2-204ENST00000448416 C2orf82Q6UX34 121 aa7.21□□□□□ -1.25
SYNPO2-204ENST00000448416 PRSS33Q8NF86 280 aa7.21□□□□□ -1.25
SYNPO2-204ENST00000448416 RPL39LQ96EH5 51 aaKnown RBP7.21□□□□□ -1.25
SYNPO2-204ENST00000448416 IGHV3-23P01764 117 aa7.21□□□□□ -1.26
SYNPO2-204ENST00000448416 CD59P13987 128 aa7.21□□□□□ -1.26
SYNPO2-204ENST00000448416 MRPL23Q16540 153 aaKnown RBP7.21□□□□□ -1.26
SYNPO2-204ENST00000448416 ZNF474Q6S9Z5 364 aaPredicted RBP7.21□□□□□ -1.26
SYNPO2-204ENST00000448416 ZNF784Q8NCA9 323 aaPredicted RBP7.21□□□□□ -1.26
SYNPO2-204ENST00000448416 CCL17Q92583 94 aa7.21□□□□□ -1.26
SYNPO2-204ENST00000448416 CSDC2Q9Y534 153 aaKnown RBP7.21□□□□□ -1.26
SYNPO2-204ENST00000448416 WNK2Q9Y3S1 2297 aa7.21□□□□□ -1.26
SYNPO2-204ENST00000448416 ELANEP08246 267 aa7.21□□□□□ -1.26
SYNPO2-204ENST00000448416 LINC00694P0DN24 101 aa7.21□□□□□ -1.26
SYNPO2-204ENST00000448416 TSPEAR-AS2P59090 65 aa7.21□□□□□ -1.26
SYNPO2-204ENST00000448416 ATP1A1-AS1Q5TC04 95 aa7.21□□□□□ -1.26
SYNPO2-204ENST00000448416 RNF182Q8N6D2 247 aa7.21□□□□□ -1.26
SYNPO2-204ENST00000448416 CRYGDP07320 174 aa7.2□□□□□ -1.26
SYNPO2-204ENST00000448416 LGALS3P17931 250 aaKnown RBP7.2□□□□□ -1.26
SYNPO2-204ENST00000448416 LOXP28300 417 aaPredicted RBP7.2□□□□□ -1.26
SYNPO2-204ENST00000448416 DLX6P56179 175 aa7.2□□□□□ -1.26
SYNPO2-204ENST00000448416 C5orf47Q569G3 176 aa7.2□□□□□ -1.26
SYNPO2-204ENST00000448416 TMEM263Q8WUH6 116 aaKnown RBP7.2□□□□□ -1.26
SYNPO2-204ENST00000448416 IGHG3P01860 377 aa7.2□□□□□ -1.26
SYNPO2-204ENST00000448416 HES1Q14469 280 aa7.2□□□□□ -1.26
SYNPO2-204ENST00000448416 DNAJC30Q96LL9 226 aa7.2□□□□□ -1.26
SYNPO2-204ENST00000448416 WDFY4Q6ZS81 3184 aa7.2□□□□□ -1.26
SYNPO2-204ENST00000448416 M0R381 172 aa7.2□□□□□ -1.26
SYNPO2-204ENST00000448416 IGLV4-69A0A075B6H9 119 aa7.19□□□□□ -1.26
SYNPO2-204ENST00000448416 IGHV3-35A0A0C4DH35 117 aa7.19□□□□□ -1.26
SYNPO2-204ENST00000448416 J3QQQ9 107 aa7.19□□□□□ -1.26
SYNPO2-204ENST00000448416 MGPP08493 103 aa7.19□□□□□ -1.26
SYNPO2-204ENST00000448416 AGPAT4-IT1Q9H0P7 198 aa7.19□□□□□ -1.26
SYNPO2-204ENST00000448416 IGHV4-4A0A075B6R2 117 aa7.19□□□□□ -1.26
SYNPO2-204ENST00000448416 C9orf153Q5TBE3 101 aa7.19□□□□□ -1.26
SYNPO2-204ENST00000448416 C14orf178Q8N769 122 aaPredicted RBP7.19□□□□□ -1.26
SYNPO2-204ENST00000448416 DUX3Q96PT4 197 aa7.19□□□□□ -1.26
SYNPO2-204ENST00000448416 A0A0B4J2C4 111 aa7.18□□□□□ -1.26
SYNPO2-204ENST00000448416 SPRY2O43597 315 aa7.18□□□□□ -1.26
SYNPO2-204ENST00000448416 EIF4EBP3O60516 100 aaPredicted RBP7.18□□□□□ -1.26
SYNPO2-204ENST00000448416 COX7A1P24310 79 aa7.18□□□□□ -1.26
SYNPO2-204ENST00000448416 PMVKQ15126 192 aa7.18□□□□□ -1.26
SYNPO2-204ENST00000448416 MUSTN1Q8IVN3 82 aa7.18□□□□□ -1.26
SYNPO2-204ENST00000448416 FAM236AA0A1B0GUQ0 79 aa7.18□□□□□ -1.26
SYNPO2-204ENST00000448416 FAM236BA0A1B0GV22 79 aa7.18□□□□□ -1.26
SYNPO2-204ENST00000448416 BUB1B-PAK6H3BSN5 160 aa7.18□□□□□ -1.26
SYNPO2-204ENST00000448416 TMEM101Q96IK0 257 aa7.18□□□□□ -1.26
SYNPO2-204ENST00000448416 LOC107984640A0A0U1RRK4 108 aa7.18□□□□□ -1.26
SYNPO2-204ENST00000448416 TMEM178BH3BS89 294 aa7.18□□□□□ -1.26
SYNPO2-204ENST00000448416 DEFB104AQ8WTQ1 72 aa7.18□□□□□ -1.26
SYNPO2-204ENST00000448416 TRGV11A0A075B6L2 103 aa7.18□□□□□ -1.26
SYNPO2-204ENST00000448416 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.18□□□□□ -1.26
SYNPO2-204ENST00000448416 RBAKDNA6NC62 111 aa7.18□□□□□ -1.26
SYNPO2-204ENST00000448416 TP53TG1Q9Y2A0 90 aa7.18□□□□□ -1.26
SYNPO2-204ENST00000448416 C17orf100A8MU93 164 aa7.17□□□□□ -1.26
SYNPO2-204ENST00000448416 IGLV1-47P01700 117 aa7.17□□□□□ -1.26
SYNPO2-204ENST00000448416 FANCD2OSQ96PS1 177 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms