RNA–Protein interactions for RNA: ENST00000439510.2

CDC42EP4-202, Transcript of CDC42 effector protein 4, humanhuman

TSL 2 BASIC

Gene CDC42EP4, Length 2,879 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-202ENST00000439510 FBXL19-AS1Q494R0 122 aa11.72□□□□□ -0.53
CDC42EP4-202ENST00000439510 Q8N9W7 124 aa11.72□□□□□ -0.53
CDC42EP4-202ENST00000439510 ASH1LQ9NR48 2969 aaKnown RBP11.72□□□□□ -0.53
CDC42EP4-202ENST00000439510 MYOZ3Q8TDC0 251 aa11.72□□□□□ -0.53
CDC42EP4-202ENST00000439510 MRPL53Q96EL3 112 aaKnown RBP11.72□□□□□ -0.53
CDC42EP4-202ENST00000439510 TMEM160Q9NX00 188 aa11.72□□□□□ -0.53
CDC42EP4-202ENST00000439510 NHP2Q9NX24 153 aaKnown RBP11.72□□□□□ -0.53
CDC42EP4-202ENST00000439510 A0A087WX48 190 aa11.71□□□□□ -0.53
CDC42EP4-202ENST00000439510 E9PLD3 99 aa11.71□□□□□ -0.53
CDC42EP4-202ENST00000439510 TRAV8-2A0A0B4J237 113 aa11.7□□□□□ -0.54
CDC42EP4-202ENST00000439510 CLEC3BP05452 202 aa11.7□□□□□ -0.54
CDC42EP4-202ENST00000439510 MAPKAPK5-AS1Q8N8E1 139 aa11.7□□□□□ -0.54
CDC42EP4-202ENST00000439510 HIF1ANQ9NWT6 349 aa11.7□□□□□ -0.54
CDC42EP4-202ENST00000439510 TEX48A0A1B0GUV7 120 aa11.69□□□□□ -0.54
CDC42EP4-202ENST00000439510 PLNP26678 52 aa11.69□□□□□ -0.54
CDC42EP4-202ENST00000439510 TMEM78Q5T7P6 136 aa11.69□□□□□ -0.54
CDC42EP4-202ENST00000439510 CITED1Q99966 193 aa11.69□□□□□ -0.54
CDC42EP4-202ENST00000439510 LRRK2Q5S007 2527 aa11.69□□□□□ -0.54
CDC42EP4-202ENST00000439510 FAM208BQ5VWN6 2430 aa11.69□□□□□ -0.54
CDC42EP4-202ENST00000439510 CENPEQ02224 2701 aa11.69□□□□□ -0.54
CDC42EP4-202ENST00000439510 C9orf47Q6ZRZ4 202 aa11.69□□□□□ -0.54
CDC42EP4-202ENST00000439510 TRAV26-2A0A0B4J265 109 aa11.69□□□□□ -0.54
CDC42EP4-202ENST00000439510 IGLL5B9A064 214 aa11.69□□□□□ -0.54
CDC42EP4-202ENST00000439510 CRYBA4P53673 196 aa11.69□□□□□ -0.54
CDC42EP4-202ENST00000439510 CCDC140Q96MF4 163 aa11.69□□□□□ -0.54
CDC42EP4-202ENST00000439510 RPL24P83731 157 aaKnown RBP11.68□□□□□ -0.54
CDC42EP4-202ENST00000439510 FOXI2Q6ZQN5 318 aa11.68□□□□□ -0.54
CDC42EP4-202ENST00000439510 TRAV12-1A0A0B4J245 112 aa11.68□□□□□ -0.54
CDC42EP4-202ENST00000439510 IGHV3-66A0A0C4DH42 116 aa11.68□□□□□ -0.54
CDC42EP4-202ENST00000439510 C11orf71Q6IPW1 123 aa11.68□□□□□ -0.54
CDC42EP4-202ENST00000439510 UFC1Q9Y3C8 167 aa11.68□□□□□ -0.54
CDC42EP4-202ENST00000439510 BRI3O95415 125 aa11.67□□□□□ -0.54
CDC42EP4-202ENST00000439510 MRAP2Q96G30 205 aa11.67□□□□□ -0.54
CDC42EP4-202ENST00000439510 VPS13CQ709C8 3753 aa11.67□□□□□ -0.54
CDC42EP4-202ENST00000439510 AGRNO00468 2067 aa11.67□□□□□ -0.54
CDC42EP4-202ENST00000439510 TRAV26-1A0A087WT03 109 aa11.67□□□□□ -0.54
CDC42EP4-202ENST00000439510 F8W1H4 67 aa11.67□□□□□ -0.54
CDC42EP4-202ENST00000439510 LINC01619G3V211 115 aa11.67□□□□□ -0.54
CDC42EP4-202ENST00000439510 ECSCRQ19T08 205 aa11.67□□□□□ -0.54
CDC42EP4-202ENST00000439510 C8orf86Q6ZUL3 223 aa11.67□□□□□ -0.54
CDC42EP4-202ENST00000439510 MAP1AP78559 2803 aaPredicted RBP11.67□□□□□ -0.54
CDC42EP4-202ENST00000439510 ATP6V0E1O15342 81 aa11.66□□□□□ -0.54
CDC42EP4-202ENST00000439510 C12orf74Q32Q52 190 aa11.66□□□□□ -0.54
CDC42EP4-202ENST00000439510 WNK2Q9Y3S1 2297 aa11.66□□□□□ -0.54
CDC42EP4-202ENST00000439510 CSMD2Q7Z408 3487 aa11.66□□□□□ -0.54
CDC42EP4-202ENST00000439510 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.66□□□□□ -0.54
CDC42EP4-202ENST00000439510 EFNA4P52798 201 aa11.66□□□□□ -0.54
CDC42EP4-202ENST00000439510 SPANXN1Q5VSR9 72 aa11.66□□□□□ -0.54
CDC42EP4-202ENST00000439510 SMIM2Q9BVW6 85 aa11.66□□□□□ -0.54
CDC42EP4-202ENST00000439510 SIRPDQ9H106 197 aa11.66□□□□□ -0.54
CDC42EP4-202ENST00000439510 U3KQE9 123 aa11.66□□□□□ -0.54
CDC42EP4-202ENST00000439510 KMT2BQ9UMN6 2715 aaPredicted RBP11.66□□□□□ -0.54
CDC42EP4-202ENST00000439510 F8VRH5 84 aa11.65□□□□□ -0.54
CDC42EP4-202ENST00000439510 CLEC19AQ6UXS0 136 aa11.65□□□□□ -0.54
CDC42EP4-202ENST00000439510 TRBV7-3A0A075B6L6 115 aa11.65□□□□□ -0.54
CDC42EP4-202ENST00000439510 H7C1H1 209 aa11.65□□□□□ -0.54
CDC42EP4-202ENST00000439510 K7EMI3 77 aa11.65□□□□□ -0.54
CDC42EP4-202ENST00000439510 ZFP36P26651 326 aaKnown RBP11.65□□□□□ -0.54
CDC42EP4-202ENST00000439510 Q6ZQT7 251 aa11.65□□□□□ -0.54
CDC42EP4-202ENST00000439510 AJUBAQ96IF1 538 aa11.65□□□□□ -0.54
CDC42EP4-202ENST00000439510 METTL26Q96S19 204 aa11.65□□□□□ -0.54
CDC42EP4-202ENST00000439510 SPANXB1Q9NS25 103 aaPredicted RBP11.65□□□□□ -0.54
CDC42EP4-202ENST00000439510 A0A1B0GWB2 263 aa11.65□□□□□ -0.55
CDC42EP4-202ENST00000439510 DOPEY1Q5JWR5 2465 aa11.64□□□□□ -0.55
CDC42EP4-202ENST00000439510 IGHV3OR16-13A0A075B7E8 117 aa11.64□□□□□ -0.55
CDC42EP4-202ENST00000439510 IGHV3-74A0A0B4J1X5 117 aa11.64□□□□□ -0.55
CDC42EP4-202ENST00000439510 TRBV7-1A0A0A6YYK4 115 aa11.64□□□□□ -0.55
CDC42EP4-202ENST00000439510 SLC25A16P16260 332 aa11.64□□□□□ -0.55
CDC42EP4-202ENST00000439510 ITLN2Q8WWU7 325 aaPredicted RBP11.64□□□□□ -0.55
CDC42EP4-202ENST00000439510 EEF1AKMT3Q96AZ1 226 aa11.64□□□□□ -0.55
CDC42EP4-202ENST00000439510 HIST1H4GQ99525 98 aa11.64□□□□□ -0.55
CDC42EP4-202ENST00000439510 LENEPQ9Y5L5 61 aa11.64□□□□□ -0.55
CDC42EP4-202ENST00000439510 ZNF843Q8N446 348 aa11.63□□□□□ -0.55
CDC42EP4-202ENST00000439510 UBR5O95071 2799 aaPredicted RBP11.63□□□□□ -0.55
CDC42EP4-202ENST00000439510 H3BVH4 76 aa11.63□□□□□ -0.55
CDC42EP4-202ENST00000439510 WFDC2Q14508 124 aa11.63□□□□□ -0.55
CDC42EP4-202ENST00000439510 ORMDL2Q53FV1 153 aa11.63□□□□□ -0.55
CDC42EP4-202ENST00000439510 TOMM6Q96B49 74 aa11.63□□□□□ -0.55
CDC42EP4-202ENST00000439510 HERV-K104P63124 156 aa11.62□□□□□ -0.55
CDC42EP4-202ENST00000439510 RRN3P1Q2M238 152 aa11.62□□□□□ -0.55
CDC42EP4-202ENST00000439510 PRR9Q5T870 116 aa11.62□□□□□ -0.55
CDC42EP4-202ENST00000439510 CENPVL3A0A0U1RRI6 287 aa11.62□□□□□ -0.55
CDC42EP4-202ENST00000439510 C19orf84I3L1E1 186 aa11.62□□□□□ -0.55
CDC42EP4-202ENST00000439510 SAMD13Q5VXD3 122 aa11.62□□□□□ -0.55
CDC42EP4-202ENST00000439510 NEXN-AS1Q8NBZ9 246 aa11.62□□□□□ -0.55
CDC42EP4-202ENST00000439510 IGHV3-49A0A0A0MS15 119 aa11.61□□□□□ -0.55
CDC42EP4-202ENST00000439510 MYMXA0A1B0GTQ4 84 aa11.61□□□□□ -0.55
CDC42EP4-202ENST00000439510 G3V318 75 aa11.61□□□□□ -0.55
CDC42EP4-202ENST00000439510 SCGB1A1P11684 91 aa11.61□□□□□ -0.55
CDC42EP4-202ENST00000439510 UBE2E1P51965 193 aa11.61□□□□□ -0.55
CDC42EP4-202ENST00000439510 C20orf78Q9BR46 151 aa11.61□□□□□ -0.55
CDC42EP4-202ENST00000439510 A0A1B0GV72 72 aa11.61□□□□□ -0.55
CDC42EP4-202ENST00000439510 OR11H12B2RN74 326 aa11.61□□□□□ -0.55
CDC42EP4-202ENST00000439510 H3BMG7 143 aa11.61□□□□□ -0.55
CDC42EP4-202ENST00000439510 ZNF207O43670 478 aaKnown RBP11.61□□□□□ -0.55
CDC42EP4-202ENST00000439510 OR11H1Q8NG94 326 aa11.61□□□□□ -0.55
CDC42EP4-202ENST00000439510 OR11H2Q8NH07 326 aa11.61□□□□□ -0.55
CDC42EP4-202ENST00000439510 SVEP1Q4LDE5 3571 aa11.61□□□□□ -0.55
CDC42EP4-202ENST00000439510 SUMO2P61956 95 aaKnown RBP11.61□□□□□ -0.55
CDC42EP4-202ENST00000439510 RASL10AQ92737 203 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 82.2 ms