RNA–Protein interactions for RNA: ENST00000422770.5

HERC3-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 4

Gene HERC3, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-204ENST00000422770 LINC01551Q86U37 167 aa6.94□□□□□ -1.3
HERC3-204ENST00000422770 TVP23CQ96ET8 276 aa6.94□□□□□ -1.3
HERC3-204ENST00000422770 ZC2HC1AQ96GY0 325 aa6.94□□□□□ -1.3
HERC3-204ENST00000422770 LINC00477Q96M19 166 aa6.94□□□□□ -1.3
HERC3-204ENST00000422770 NAGKQ9UJ70 344 aa6.94□□□□□ -1.3
HERC3-204ENST00000422770 CARHSP1Q9Y2V2 147 aaKnown RBP6.94□□□□□ -1.3
HERC3-204ENST00000422770 DEFB131BA0A096LNP1 70 aa6.93□□□□□ -1.3
HERC3-204ENST00000422770 C7orf71A4D174 169 aa6.93□□□□□ -1.3
HERC3-204ENST00000422770 H7BYZ3 331 aa6.93□□□□□ -1.3
HERC3-204ENST00000422770 SH2D1AO60880 128 aa6.93□□□□□ -1.3
HERC3-204ENST00000422770 DEFB130BP0DP73 79 aa6.93□□□□□ -1.3
HERC3-204ENST00000422770 DEFB130AP0DP74 79 aa6.93□□□□□ -1.3
HERC3-204ENST00000422770 AZU1P20160 251 aa6.93□□□□□ -1.3
HERC3-204ENST00000422770 RPL23P62829 140 aaKnown RBP6.93□□□□□ -1.3
HERC3-204ENST00000422770 OR5I1Q13606 314 aa6.93□□□□□ -1.3
HERC3-204ENST00000422770 C12orf74Q32Q52 190 aa6.93□□□□□ -1.3
HERC3-204ENST00000422770 SAPCD1Q5SSQ6 148 aa6.93□□□□□ -1.3
HERC3-204ENST00000422770 TMEM183AQ8IXX5 376 aa6.93□□□□□ -1.3
HERC3-204ENST00000422770 ZFAND2AQ8N6M9 145 aa6.93□□□□□ -1.3
HERC3-204ENST00000422770 C16orf74Q96GX8 76 aa6.93□□□□□ -1.3
HERC3-204ENST00000422770 ODF3Q96PU9 254 aa6.93□□□□□ -1.3
HERC3-204ENST00000422770 DKK2Q9UBU2 259 aa6.93□□□□□ -1.3
HERC3-204ENST00000422770 ZFP30Q9Y2G7 519 aa6.93□□□□□ -1.3
HERC3-204ENST00000422770 SNURFLB1AK76 121 aa6.92□□□□□ -1.3
HERC3-204ENST00000422770 IGLV2-8P01709 118 aa6.92□□□□□ -1.3
HERC3-204ENST00000422770 CRISP2P16562 243 aa6.92□□□□□ -1.3
HERC3-204ENST00000422770 PNRC1Q12796 327 aaPredicted RBP6.92□□□□□ -1.3
HERC3-204ENST00000422770 SVBPQ8N300 66 aa6.92□□□□□ -1.3
HERC3-204ENST00000422770 OCC1Q8TAD7 63 aa6.92□□□□□ -1.3
HERC3-204ENST00000422770 ISOC2Q96AB3 205 aa6.92□□□□□ -1.3
HERC3-204ENST00000422770 SMIM12Q96EX1 92 aa6.92□□□□□ -1.3
HERC3-204ENST00000422770 C20orf144Q9BQM9 153 aa6.92□□□□□ -1.3
HERC3-204ENST00000422770 SDF2L1Q9HCN8 221 aa6.92□□□□□ -1.3
HERC3-204ENST00000422770 LENEPQ9Y5L5 61 aa6.92□□□□□ -1.3
HERC3-204ENST00000422770 LY96Q9Y6Y9 160 aa6.92□□□□□ -1.3
HERC3-204ENST00000422770 TMSB15BA0A087X1C1 80 aa6.91□□□□□ -1.3
HERC3-204ENST00000422770 CBY3A6NI87 242 aa6.91□□□□□ -1.3
HERC3-204ENST00000422770 ZNF80P51504 273 aaPredicted RBP6.91□□□□□ -1.3
HERC3-204ENST00000422770 C10orf91Q5T1B1 145 aa6.91□□□□□ -1.3
HERC3-204ENST00000422770 FAM162BQ5T6X4 162 aa6.91□□□□□ -1.3
HERC3-204ENST00000422770 TMEM263Q8WUH6 116 aaKnown RBP6.91□□□□□ -1.3
HERC3-204ENST00000422770 RNASE7Q9H1E1 156 aaKnown RBP6.91□□□□□ -1.3
HERC3-204ENST00000422770 NOP10Q9NPE3 64 aaKnown RBP6.91□□□□□ -1.3
HERC3-204ENST00000422770 BIN3Q9NQY0 253 aa6.91□□□□□ -1.3
HERC3-204ENST00000422770 DNAH7Q8WXX0 4024 aa6.91□□□□□ -1.3
HERC3-204ENST00000422770 IGHV4-4A0A075B6R2 117 aa6.9□□□□□ -1.3
HERC3-204ENST00000422770 TRBV7-9A0A0J9YWB2 115 aa6.9□□□□□ -1.3
HERC3-204ENST00000422770 LYRM9A8MSI8 78 aa6.9□□□□□ -1.3
HERC3-204ENST00000422770 KLLNB2CW77 178 aa6.9□□□□□ -1.3
HERC3-204ENST00000422770 SNAPINO95295 136 aa6.9□□□□□ -1.3
HERC3-204ENST00000422770 P01737 135 aa6.9□□□□□ -1.3
HERC3-204ENST00000422770 ERVFC1-1P60608 527 aa6.9□□□□□ -1.3
HERC3-204ENST00000422770 RPL19P84098 196 aaKnown RBP6.9□□□□□ -1.3
HERC3-204ENST00000422770 RHEBQ15382 184 aa6.9□□□□□ -1.3
HERC3-204ENST00000422770 MUC21Q5SSG8 566 aa6.9□□□□□ -1.3
HERC3-204ENST00000422770 IBA57Q5T440 356 aaKnown RBP6.9□□□□□ -1.3
HERC3-204ENST00000422770 C15orf54Q8N8G6 183 aa6.9□□□□□ -1.3
HERC3-204ENST00000422770 CLRN3Q8NCR9 226 aa6.9□□□□□ -1.3
HERC3-204ENST00000422770 LINC00476Q8WZB0 136 aa6.9□□□□□ -1.3
HERC3-204ENST00000422770 DAZAP1Q96EP5 407 aaKnown RBP6.9□□□□□ -1.3
HERC3-204ENST00000422770 SFRP2Q96HF1 295 aa6.9□□□□□ -1.3
HERC3-204ENST00000422770 FAM19A4Q96LR4 140 aa6.9□□□□□ -1.3
HERC3-204ENST00000422770 MLST8Q9BVC4 326 aa6.9□□□□□ -1.3
HERC3-204ENST00000422770 TIMM8BQ9Y5J9 83 aaPredicted RBP6.9□□□□□ -1.3
HERC3-204ENST00000422770 TRAV21A0A0B4J279 112 aa6.89□□□□□ -1.31
HERC3-204ENST00000422770 GATCO43716 136 aaKnown RBP6.89□□□□□ -1.31
HERC3-204ENST00000422770 PFN1P07737 140 aaKnown RBP6.89□□□□□ -1.31
HERC3-204ENST00000422770 S100A1P23297 94 aa6.89□□□□□ -1.31
HERC3-204ENST00000422770 RNF212Q495C1 297 aa6.89□□□□□ -1.31
HERC3-204ENST00000422770 Q6ZQT7 251 aa6.89□□□□□ -1.31
HERC3-204ENST00000422770 ZNF493Q6ZR52 646 aa6.89□□□□□ -1.31
HERC3-204ENST00000422770 OR2D3Q8NGH3 330 aa6.89□□□□□ -1.31
HERC3-204ENST00000422770 OR10G8Q8NGN5 311 aa6.89□□□□□ -1.31
HERC3-204ENST00000422770 RNASE8Q8TDE3 154 aaKnown RBP6.89□□□□□ -1.31
HERC3-204ENST00000422770 PYGO2Q9BRQ0 406 aa6.89□□□□□ -1.31
HERC3-204ENST00000422770 NDUFAF3Q9BU61 184 aa6.89□□□□□ -1.31
HERC3-204ENST00000422770 RPP21Q9H633 154 aaKnown RBP6.89□□□□□ -1.31
HERC3-204ENST00000422770 DYNC2H1Q8NCM8 4307 aaKnown RBP6.89□□□□□ -1.31
HERC3-204ENST00000422770 RYR2Q92736 4967 aa6.89□□□□□ -1.31
HERC3-204ENST00000422770 GAGE12BA1L429 117 aa6.88□□□□□ -1.31
HERC3-204ENST00000422770 F5H768 121 aa6.88□□□□□ -1.31
HERC3-204ENST00000422770 GAGE7O76087 117 aa6.88□□□□□ -1.31
HERC3-204ENST00000422770 ORM1P02763 201 aa6.88□□□□□ -1.31
HERC3-204ENST00000422770 MT-ND4LP03901 98 aa6.88□□□□□ -1.31
HERC3-204ENST00000422770 GAGE12FP0CL80 117 aa6.88□□□□□ -1.31
HERC3-204ENST00000422770 GAGE12GP0CL81 117 aa6.88□□□□□ -1.31
HERC3-204ENST00000422770 GAGE12IP0CL82 117 aa6.88□□□□□ -1.31
HERC3-204ENST00000422770 TCL1AP56279 114 aa6.88□□□□□ -1.31
HERC3-204ENST00000422770 Q6AWC8 147 aa6.88□□□□□ -1.31
HERC3-204ENST00000422770 RPS10P5Q9NQ39 176 aa6.88□□□□□ -1.31
HERC3-204ENST00000422770 IGHV1OR15-1A0A075B7D0 117 aa6.87□□□□□ -1.31
HERC3-204ENST00000422770 PLAC8L1A1L4L8 177 aa6.87□□□□□ -1.31
HERC3-204ENST00000422770 C7orf77A4D0Y5 90 aa6.87□□□□□ -1.31
HERC3-204ENST00000422770 C19orf71A6NCJ1 209 aa6.87□□□□□ -1.31
HERC3-204ENST00000422770 B4DEV8 164 aa6.87□□□□□ -1.31
HERC3-204ENST00000422770 ATP5G1P05496 136 aa6.87□□□□□ -1.31
HERC3-204ENST00000422770 CRIP1P50238 77 aa6.87□□□□□ -1.31
HERC3-204ENST00000422770 ATRAIDQ6UW56 229 aa6.87□□□□□ -1.31
HERC3-204ENST00000422770 FAM231DQ6ZW35 169 aa6.87□□□□□ -1.31
HERC3-204ENST00000422770 COX8CQ7Z4L0 72 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms