RNA–Protein interactions for RNA: ENST00000413806.7

SMARCA4-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 5 BASIC

Gene SMARCA4, Length 5,512 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-202ENST00000413806 RNF223E7ERA6 249 aa10.84□□□□□ -0.67
SMARCA4-202ENST00000413806 IGHV7-4-1A0A0J9YVY3 117 aa10.84□□□□□ -0.67
SMARCA4-202ENST00000413806 RTTNQ86VV8 2226 aa10.84□□□□□ -0.67
SMARCA4-202ENST00000413806 SP5Q6BEB4 398 aaPredicted RBP10.83□□□□□ -0.67
SMARCA4-202ENST00000413806 RNF183Q96D59 192 aa10.83□□□□□ -0.67
SMARCA4-202ENST00000413806 HEATR1Q9H583 2144 aaKnown RBP10.83□□□□□ -0.68
SMARCA4-202ENST00000413806 BAALC-AS2P0C853 105 aa10.83□□□□□ -0.68
SMARCA4-202ENST00000413806 KLK9Q9UKQ9 250 aa10.83□□□□□ -0.68
SMARCA4-202ENST00000413806 KIAA2026Q5HYC2 2103 aa10.83□□□□□ -0.68
SMARCA4-202ENST00000413806 TRAV13-2A0A0B4J235 113 aa10.83□□□□□ -0.68
SMARCA4-202ENST00000413806 A0A0B4J2C4 111 aa10.83□□□□□ -0.68
SMARCA4-202ENST00000413806 PI4KAP42356 2102 aa10.82□□□□□ -0.68
SMARCA4-202ENST00000413806 TRBV25-1A0A075B6N4 114 aa10.82□□□□□ -0.68
SMARCA4-202ENST00000413806 HOXB4P17483 251 aaPredicted RBP10.82□□□□□ -0.68
SMARCA4-202ENST00000413806 BRK1Q8WUW1 75 aa10.82□□□□□ -0.68
SMARCA4-202ENST00000413806 IGHG2P01859 326 aa10.81□□□□□ -0.68
SMARCA4-202ENST00000413806 IGF2-ASQ6U949 168 aa10.81□□□□□ -0.68
SMARCA4-202ENST00000413806 CTSZQ9UBR2 303 aa10.81□□□□□ -0.68
SMARCA4-202ENST00000413806 K7EMI3 77 aa10.81□□□□□ -0.68
SMARCA4-202ENST00000413806 LENEPQ9Y5L5 61 aa10.81□□□□□ -0.68
SMARCA4-202ENST00000413806 ELANEP08246 267 aa10.81□□□□□ -0.68
SMARCA4-202ENST00000413806 XCL2Q9UBD3 114 aa10.81□□□□□ -0.68
SMARCA4-202ENST00000413806 CACNA1GO43497 2377 aa10.81□□□□□ -0.68
SMARCA4-202ENST00000413806 PFN2P35080 140 aa10.8□□□□□ -0.68
SMARCA4-202ENST00000413806 CR1LQ2VPA4 569 aa10.8□□□□□ -0.68
SMARCA4-202ENST00000413806 FAM120AOSQ5T036 256 aa10.8□□□□□ -0.68
SMARCA4-202ENST00000413806 ATP6V0E2Q8NHE4 81 aa10.8□□□□□ -0.68
SMARCA4-202ENST00000413806 C22orf46C9J442 243 aa10.8□□□□□ -0.68
SMARCA4-202ENST00000413806 NBL1P41271 181 aa10.8□□□□□ -0.68
SMARCA4-202ENST00000413806 DEFB130BP0DP73 79 aa10.79□□□□□ -0.68
SMARCA4-202ENST00000413806 DEFB130AP0DP74 79 aa10.79□□□□□ -0.68
SMARCA4-202ENST00000413806 ANKRD39Q53RE8 183 aa10.79□□□□□ -0.68
SMARCA4-202ENST00000413806 LINC01545Q5VT33 79 aa10.79□□□□□ -0.68
SMARCA4-202ENST00000413806 NPBQ8NG41 125 aa10.79□□□□□ -0.68
SMARCA4-202ENST00000413806 ZNF493Q6ZR52 646 aa10.79□□□□□ -0.68
SMARCA4-202ENST00000413806 FER1L5A0AVI2 2057 aa10.79□□□□□ -0.68
SMARCA4-202ENST00000413806 TRAV25A0A0B4J276 109 aa10.78□□□□□ -0.68
SMARCA4-202ENST00000413806 FXYD2P54710 66 aa10.78□□□□□ -0.68
SMARCA4-202ENST00000413806 LINC00173Q6ZV60 143 aa10.78□□□□□ -0.68
SMARCA4-202ENST00000413806 DENND4CQ5VZ89 1909 aa10.78□□□□□ -0.68
SMARCA4-202ENST00000413806 IGKV3D-7A0A0C4DH55 119 aa10.78□□□□□ -0.68
SMARCA4-202ENST00000413806 NOTCH4Q99466 2003 aa10.78□□□□□ -0.68
SMARCA4-202ENST00000413806 UBE2DNLQ8IWF7 75 aa10.78□□□□□ -0.68
SMARCA4-202ENST00000413806 F6UB75 175 aa10.77□□□□□ -0.68
SMARCA4-202ENST00000413806 PRB1P04280 392 aa10.77□□□□□ -0.68
SMARCA4-202ENST00000413806 YLPM1P49750 1951 aaKnown RBP10.77□□□□□ -0.69
SMARCA4-202ENST00000413806 GP9P14770 177 aa10.77□□□□□ -0.69
SMARCA4-202ENST00000413806 DYNAPQ8N1N2 210 aa10.77□□□□□ -0.69
SMARCA4-202ENST00000413806 C17orf77Q96MU5 243 aa10.77□□□□□ -0.69
SMARCA4-202ENST00000413806 HOXD3P31249 432 aaPredicted RBP10.77□□□□□ -0.69
SMARCA4-202ENST00000413806 CEP250Q9BV73 2442 aa10.76□□□□□ -0.69
SMARCA4-202ENST00000413806 TRAV12-2A0A075B6T6 113 aa10.76□□□□□ -0.69
SMARCA4-202ENST00000413806 RHOHQ15669 191 aa10.76□□□□□ -0.69
SMARCA4-202ENST00000413806 Q96MF0 132 aa10.76□□□□□ -0.69
SMARCA4-202ENST00000413806 ORMDL1Q9P0S3 153 aa10.76□□□□□ -0.69
SMARCA4-202ENST00000413806 IGHV3-16A0A0C4DH30 117 aa10.76□□□□□ -0.69
SMARCA4-202ENST00000413806 I3L2K1 104 aa10.76□□□□□ -0.69
SMARCA4-202ENST00000413806 PSMB8P28062 276 aa10.76□□□□□ -0.69
SMARCA4-202ENST00000413806 LINC01620Q4KN68 170 aa10.76□□□□□ -0.69
SMARCA4-202ENST00000413806 SVIPQ8NHG7 77 aa10.76□□□□□ -0.69
SMARCA4-202ENST00000413806 ZNF318Q5VUA4 2279 aa10.76□□□□□ -0.69
SMARCA4-202ENST00000413806 EGR2P11161 476 aaPredicted RBP10.76□□□□□ -0.69
SMARCA4-202ENST00000413806 ZNRF2Q8NHG8 242 aa10.75□□□□□ -0.69
SMARCA4-202ENST00000413806 PLA2G2EQ9NZK7 142 aa10.75□□□□□ -0.69
SMARCA4-202ENST00000413806 SPRNQ5BIV9 151 aa10.75□□□□□ -0.69
SMARCA4-202ENST00000413806 AGPAT4-IT1Q9H0P7 198 aa10.75□□□□□ -0.69
SMARCA4-202ENST00000413806 HIGD1BQ9P298 99 aa10.75□□□□□ -0.69
SMARCA4-202ENST00000413806 HERVK_113P63121 156 aa10.75□□□□□ -0.69
SMARCA4-202ENST00000413806 IGF2BP2-AS1Q96M15 143 aa10.75□□□□□ -0.69
SMARCA4-202ENST00000413806 ICOSQ9Y6W8 199 aa10.75□□□□□ -0.69
SMARCA4-202ENST00000413806 CFHR4Q92496 578 aa10.74□□□□□ -0.69
SMARCA4-202ENST00000413806 DAD1P61803 113 aa10.74□□□□□ -0.69
SMARCA4-202ENST00000413806 Q6ZUT4 128 aa10.74□□□□□ -0.69
SMARCA4-202ENST00000413806 IGFBPL1Q8WX77 278 aa10.74□□□□□ -0.69
SMARCA4-202ENST00000413806 NDUFV3P56181 108 aaKnown RBP10.74□□□□□ -0.69
SMARCA4-202ENST00000413806 DKK4Q9UBT3 224 aa10.73□□□□□ -0.69
SMARCA4-202ENST00000413806 CENPVL3A0A0U1RRI6 287 aa10.73□□□□□ -0.69
SMARCA4-202ENST00000413806 hADV29S1A0JD25 119 aa10.73□□□□□ -0.69
SMARCA4-202ENST00000413806 IGLV11-55A0A075B6I3 123 aa10.73□□□□□ -0.69
SMARCA4-202ENST00000413806 COL4A3Q01955 1670 aa10.73□□□□□ -0.69
SMARCA4-202ENST00000413806 K7EIM0 57 aa10.72□□□□□ -0.69
SMARCA4-202ENST00000413806 RBX1P62877 108 aa10.72□□□□□ -0.69
SMARCA4-202ENST00000413806 WFDC9Q8NEX5 89 aa10.72□□□□□ -0.69
SMARCA4-202ENST00000413806 DOCK8Q8NF50 2099 aa10.72□□□□□ -0.69
SMARCA4-202ENST00000413806 MYO7BQ6PIF6 2116 aa10.72□□□□□ -0.69
SMARCA4-202ENST00000413806 NXPH4O95158 308 aa10.72□□□□□ -0.69
SMARCA4-202ENST00000413806 WT1P19544 449 aaPredicted RBP10.72□□□□□ -0.69
SMARCA4-202ENST00000413806 CFHR3Q02985 330 aa10.72□□□□□ -0.69
SMARCA4-202ENST00000413806 PRSS33Q8NF86 280 aa10.72□□□□□ -0.69
SMARCA4-202ENST00000413806 APOC4P55056 127 aa10.72□□□□□ -0.69
SMARCA4-202ENST00000413806 V9GYY9 64 aa10.72□□□□□ -0.69
SMARCA4-202ENST00000413806 CNOT1A5YKK6 2376 aaKnown RBP10.72□□□□□ -0.69
SMARCA4-202ENST00000413806 MAPK1IP1LQ8NDC0 245 aa10.72□□□□□ -0.69
SMARCA4-202ENST00000413806 ZNF407Q9C0G0 2248 aa10.72□□□□□ -0.69
SMARCA4-202ENST00000413806 MT-ATP8P03928 68 aa10.71□□□□□ -0.69
SMARCA4-202ENST00000413806 MRPL55Q7Z7F7 128 aaKnown RBP10.71□□□□□ -0.69
SMARCA4-202ENST00000413806 EP300Q09472 2414 aaPredicted RBP10.71□□□□□ -0.69
SMARCA4-202ENST00000413806 ATP5G1P05496 136 aa10.71□□□□□ -0.69
SMARCA4-202ENST00000413806 VPREB3Q9UKI3 123 aa10.71□□□□□ -0.69
SMARCA4-202ENST00000413806 PATE2Q6UY27 113 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms