RNA–Protein interactions for RNA: ENST00000398568.6

CYLD-202, Transcript of CYLD lysine 63 deubiquitinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CYLD, Length 3,536 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYLD-202ENST00000398568 PRR30Q53SZ7 412 aaPredicted RBP11.69□□□□□ -0.54
CYLD-202ENST00000398568 NTN5Q8WTR8 489 aaPredicted RBP11.69□□□□□ -0.54
CYLD-202ENST00000398568 Q8TAT8 98 aa11.68□□□□□ -0.54
CYLD-202ENST00000398568 PLEKHB2Q96CS7 222 aa11.68□□□□□ -0.54
CYLD-202ENST00000398568 PPDPFQ9H3Y8 114 aa11.68□□□□□ -0.54
CYLD-202ENST00000398568 FLNCQ14315 2725 aa11.68□□□□□ -0.54
CYLD-202ENST00000398568 IGLV2-18A0A075B6J9 118 aa11.68□□□□□ -0.54
CYLD-202ENST00000398568 CD7P09564 240 aa11.68□□□□□ -0.54
CYLD-202ENST00000398568 Q6ZQT7 251 aa11.68□□□□□ -0.54
CYLD-202ENST00000398568 C10orf126Q8N4M7 172 aa11.68□□□□□ -0.54
CYLD-202ENST00000398568 IGHV3-72A0A0B4J1Y9 119 aa11.68□□□□□ -0.54
CYLD-202ENST00000398568 M0QXV9 152 aa11.68□□□□□ -0.54
CYLD-202ENST00000398568 PDE6HQ13956 83 aa11.68□□□□□ -0.54
CYLD-202ENST00000398568 TMEM155Q4W5P6 130 aa11.68□□□□□ -0.54
CYLD-202ENST00000398568 RNF125Q96EQ8 232 aa11.67□□□□□ -0.54
CYLD-202ENST00000398568 RAB1BQ9H0U4 201 aa11.67□□□□□ -0.54
CYLD-202ENST00000398568 PRO1854Q9UHT4 67 aa11.67□□□□□ -0.54
CYLD-202ENST00000398568 CCL3L1P16619 93 aa11.67□□□□□ -0.54
CYLD-202ENST00000398568 Q8N1Y9 231 aa11.67□□□□□ -0.54
CYLD-202ENST00000398568 TRAV2A0A0B4J234 112 aa11.66□□□□□ -0.54
CYLD-202ENST00000398568 CD40P25942 277 aa11.66□□□□□ -0.54
CYLD-202ENST00000398568 ZNF80P51504 273 aaPredicted RBP11.66□□□□□ -0.54
CYLD-202ENST00000398568 PVRIGQ6DKI7 326 aa11.66□□□□□ -0.54
CYLD-202ENST00000398568 DSCAMO60469 2012 aa11.66□□□□□ -0.54
CYLD-202ENST00000398568 IGKV1-17P01599 117 aa11.66□□□□□ -0.54
CYLD-202ENST00000398568 HERVK_113P61574 105 aa11.66□□□□□ -0.54
CYLD-202ENST00000398568 IGHV1-18A0A0C4DH31 117 aa11.65□□□□□ -0.54
CYLD-202ENST00000398568 HLA-DMBP28068 263 aa11.65□□□□□ -0.54
CYLD-202ENST00000398568 C3orf56Q8N813 242 aa11.65□□□□□ -0.54
CYLD-202ENST00000398568 PRORYQ9H606 182 aa11.65□□□□□ -0.54
CYLD-202ENST00000398568 SPRR3Q9UBC9 169 aa11.65□□□□□ -0.54
CYLD-202ENST00000398568 CNFNQ9BYD5 112 aa11.65□□□□□ -0.54
CYLD-202ENST00000398568 ADGRG4Q8IZF6 3080 aa11.65□□□□□ -0.54
CYLD-202ENST00000398568 CFC1BP0CG36 223 aa11.64□□□□□ -0.55
CYLD-202ENST00000398568 CFC1P0CG37 223 aa11.64□□□□□ -0.55
CYLD-202ENST00000398568 RPL7P18124 248 aaKnown RBP11.64□□□□□ -0.55
CYLD-202ENST00000398568 KLHL30-AS1Q8NEE0 82 aa11.64□□□□□ -0.55
CYLD-202ENST00000398568 FAM57AQ8TBR7 257 aa11.64□□□□□ -0.55
CYLD-202ENST00000398568 BBC3Q96PG8 261 aaPredicted RBP11.64□□□□□ -0.55
CYLD-202ENST00000398568 TRAV26-2A0A0B4J265 109 aa11.64□□□□□ -0.55
CYLD-202ENST00000398568 TNFAIP6P98066 277 aaPredicted RBP11.64□□□□□ -0.55
CYLD-202ENST00000398568 ORMDL2Q53FV1 153 aa11.64□□□□□ -0.55
CYLD-202ENST00000398568 DSCAML1Q8TD84 2053 aa11.64□□□□□ -0.55
CYLD-202ENST00000398568 H7C2G1 150 aa11.64□□□□□ -0.55
CYLD-202ENST00000398568 COX8CQ7Z4L0 72 aa11.64□□□□□ -0.55
CYLD-202ENST00000398568 TRPT1Q86TN4 253 aaKnown RBP11.64□□□□□ -0.55
CYLD-202ENST00000398568 RASL10AQ92737 203 aa11.64□□□□□ -0.55
CYLD-202ENST00000398568 MDFICQ9P1T7 246 aa11.64□□□□□ -0.55
CYLD-202ENST00000398568 SRSF2Q01130 221 aaKnown RBP11.63□□□□□ -0.55
CYLD-202ENST00000398568 Q1RN00 199 aa11.63□□□□□ -0.55
CYLD-202ENST00000398568 ZNF491Q8N8L2 437 aa11.63□□□□□ -0.55
CYLD-202ENST00000398568 C1orf162Q8NEQ5 155 aaPredicted RBP11.63□□□□□ -0.55
CYLD-202ENST00000398568 LRRK2Q5S007 2527 aa11.63□□□□□ -0.55
CYLD-202ENST00000398568 MSMPQ1L6U9 139 aa11.63□□□□□ -0.55
CYLD-202ENST00000398568 TIMD4Q96H15 378 aa11.63□□□□□ -0.55
CYLD-202ENST00000398568 ATP5J2P56134 94 aa11.62□□□□□ -0.55
CYLD-202ENST00000398568 CENPEQ02224 2701 aa11.62□□□□□ -0.55
CYLD-202ENST00000398568 C5orf47Q569G3 176 aa11.62□□□□□ -0.55
CYLD-202ENST00000398568 CTSZQ9UBR2 303 aa11.62□□□□□ -0.55
CYLD-202ENST00000398568 I3L2K1 104 aa11.62□□□□□ -0.55
CYLD-202ENST00000398568 NEXN-AS1Q8NBZ9 246 aa11.62□□□□□ -0.55
CYLD-202ENST00000398568 ODF3Q96PU9 254 aa11.62□□□□□ -0.55
CYLD-202ENST00000398568 TRAV17A0A0B4J275 112 aa11.61□□□□□ -0.55
CYLD-202ENST00000398568 MRPS12O15235 138 aaKnown RBP11.61□□□□□ -0.55
CYLD-202ENST00000398568 IGLV1-44P01699 117 aa11.61□□□□□ -0.55
CYLD-202ENST00000398568 TRGV3P03979 118 aa11.61□□□□□ -0.55
CYLD-202ENST00000398568 CRIP2P52943 208 aaPredicted RBP11.61□□□□□ -0.55
CYLD-202ENST00000398568 ATXN8Q156A1 80 aa11.61□□□□□ -0.55
CYLD-202ENST00000398568 NRACQ8N912 160 aa11.61□□□□□ -0.55
CYLD-202ENST00000398568 POLEQ07864 2286 aa11.61□□□□□ -0.55
CYLD-202ENST00000398568 SMIM2Q9BVW6 85 aa11.61□□□□□ -0.55
CYLD-202ENST00000398568 A0A0J9YY99 117 aa11.61□□□□□ -0.55
CYLD-202ENST00000398568 HES1Q14469 280 aa11.61□□□□□ -0.55
CYLD-202ENST00000398568 CHCHD5Q9BSY4 110 aa11.61□□□□□ -0.55
CYLD-202ENST00000398568 UTP20O75691 2785 aaKnown RBP11.61□□□□□ -0.55
CYLD-202ENST00000398568 H3BMM0 161 aa11.6□□□□□ -0.55
CYLD-202ENST00000398568 SPANXN1Q5VSR9 72 aa11.6□□□□□ -0.55
CYLD-202ENST00000398568 MDS2Q8NDY4 140 aa11.6□□□□□ -0.55
CYLD-202ENST00000398568 UBE2WQ96B02 151 aa11.6□□□□□ -0.55
CYLD-202ENST00000398568 SIGLEC9Q9Y336 463 aa11.6□□□□□ -0.55
CYLD-202ENST00000398568 M0R1B8 84 aa11.6□□□□□ -0.55
CYLD-202ENST00000398568 MRGPRG-AS1Q2M3A8 158 aa11.6□□□□□ -0.55
CYLD-202ENST00000398568 NRGNQ92686 78 aa11.6□□□□□ -0.55
CYLD-202ENST00000398568 ICE1Q9Y2F5 2266 aa11.6□□□□□ -0.55
CYLD-202ENST00000398568 KMT2BQ9UMN6 2715 aaPredicted RBP11.6□□□□□ -0.55
CYLD-202ENST00000398568 IGHV4-39P01824 125 aa11.6□□□□□ -0.55
CYLD-202ENST00000398568 CNTFRP26992 372 aa11.6□□□□□ -0.55
CYLD-202ENST00000398568 EMP1P54849 157 aa11.6□□□□□ -0.55
CYLD-202ENST00000398568 HELZ2Q9BYK8 2649 aaKnown RBP11.6□□□□□ -0.55
CYLD-202ENST00000398568 TOMM6Q96B49 74 aa11.59□□□□□ -0.55
CYLD-202ENST00000398568 TEX49A0A1B0GTD5 131 aa11.59□□□□□ -0.55
CYLD-202ENST00000398568 ZNF56Q15929 161 aa11.59□□□□□ -0.55
CYLD-202ENST00000398568 MRPL23Q16540 153 aaKnown RBP11.59□□□□□ -0.55
CYLD-202ENST00000398568 LINC01620Q4KN68 170 aa11.59□□□□□ -0.55
CYLD-202ENST00000398568 TMEM200BQ69YZ2 307 aa11.59□□□□□ -0.55
CYLD-202ENST00000398568 CSDC2Q9Y534 153 aaKnown RBP11.59□□□□□ -0.55
CYLD-202ENST00000398568 IGHG4P01861 327 aa11.59□□□□□ -0.55
CYLD-202ENST00000398568 COX6B1P14854 86 aa11.59□□□□□ -0.55
CYLD-202ENST00000398568 GATA4P43694 442 aa11.59□□□□□ -0.55
CYLD-202ENST00000398568 Q8NA96 180 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms