RNA–Protein interactions for RNA: ENST00000398145.6

HPS4-202, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS4, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-202ENST00000398145 RITA1Q96K30 269 aa8.68□□□□□ -1.02
HPS4-202ENST00000398145 DKK4Q9UBT3 224 aa8.68□□□□□ -1.02
HPS4-202ENST00000398145 LINC00322Q6ZN03 302 aaPredicted RBP8.68□□□□□ -1.02
HPS4-202ENST00000398145 CGB3P0DN86 165 aa8.68□□□□□ -1.02
HPS4-202ENST00000398145 CGB7P0DN87 165 aa8.68□□□□□ -1.02
HPS4-202ENST00000398145 RBX1P62877 108 aa8.68□□□□□ -1.02
HPS4-202ENST00000398145 ZNF493Q6ZR52 646 aa8.68□□□□□ -1.02
HPS4-202ENST00000398145 CFHR4Q92496 578 aa8.68□□□□□ -1.02
HPS4-202ENST00000398145 MLST8Q9BVC4 326 aa8.68□□□□□ -1.02
HPS4-202ENST00000398145 RASL10AQ92737 203 aa8.67□□□□□ -1.02
HPS4-202ENST00000398145 IGKV1D-37A0A075B6S9 117 aa8.67□□□□□ -1.02
HPS4-202ENST00000398145 CRYGCP07315 174 aa8.67□□□□□ -1.02
HPS4-202ENST00000398145 WNK1Q9H4A3 2382 aa8.67□□□□□ -1.02
HPS4-202ENST00000398145 C1QTNF4Q9BXJ3 329 aa8.67□□□□□ -1.02
HPS4-202ENST00000398145 ACACBO00763 2458 aa8.67□□□□□ -1.02
HPS4-202ENST00000398145 NCKAP5O14513 1909 aa8.67□□□□□ -1.02
HPS4-202ENST00000398145 HCFC1P51610 2035 aa8.66□□□□□ -1.02
HPS4-202ENST00000398145 RBAKDNA6NC62 111 aa8.66□□□□□ -1.02
HPS4-202ENST00000398145 TRBV6-1A0A0K0K1D8 114 aa8.66□□□□□ -1.02
HPS4-202ENST00000398145 ADARB2-AS1A8MUL3 147 aa8.66□□□□□ -1.02
HPS4-202ENST00000398145 CRPP02741 224 aa8.66□□□□□ -1.02
HPS4-202ENST00000398145 FOXE3Q13461 319 aa8.66□□□□□ -1.02
HPS4-202ENST00000398145 PRIMA1Q86XR5 153 aa8.66□□□□□ -1.02
HPS4-202ENST00000398145 PRSS33Q8NF86 280 aa8.66□□□□□ -1.02
HPS4-202ENST00000398145 LENEPQ9Y5L5 61 aa8.66□□□□□ -1.02
HPS4-202ENST00000398145 IGLV2-23P01705 113 aa8.66□□□□□ -1.02
HPS4-202ENST00000398145 LINC00158P58513 81 aa8.66□□□□□ -1.02
HPS4-202ENST00000398145 ZNF415Q09FC8 603 aa8.66□□□□□ -1.02
HPS4-202ENST00000398145 STHQ8IWL8 128 aa8.66□□□□□ -1.02
HPS4-202ENST00000398145 RNF114Q9Y508 228 aa8.66□□□□□ -1.02
HPS4-202ENST00000398145 MSMPQ1L6U9 139 aa8.66□□□□□ -1.02
HPS4-202ENST00000398145 BPESC1Q9GZL8 116 aa8.66□□□□□ -1.02
HPS4-202ENST00000398145 TP73-AS1Q9UF72 201 aa8.66□□□□□ -1.02
HPS4-202ENST00000398145 C2CD3Q4AC94 2353 aa8.65□□□□□ -1.02
HPS4-202ENST00000398145 RPL36AP83881 106 aaKnown RBP8.65□□□□□ -1.02
HPS4-202ENST00000398145 ODF1Q14990 250 aa8.65□□□□□ -1.02
HPS4-202ENST00000398145 RPL36ALQ969Q0 106 aaKnown RBP8.65□□□□□ -1.02
HPS4-202ENST00000398145 C1orf159Q96HA4 380 aa8.65□□□□□ -1.02
HPS4-202ENST00000398145 I3L3M4 83 aa8.65□□□□□ -1.03
HPS4-202ENST00000398145 COX6B1P14854 86 aa8.65□□□□□ -1.03
HPS4-202ENST00000398145 DAZAP2Q15038 168 aaPredicted RBP8.65□□□□□ -1.03
HPS4-202ENST00000398145 DSCAML1Q8TD84 2053 aa8.65□□□□□ -1.03
HPS4-202ENST00000398145 FAM208BQ5VWN6 2430 aa8.65□□□□□ -1.03
HPS4-202ENST00000398145 NDUFA4O00483 81 aa8.64□□□□□ -1.03
HPS4-202ENST00000398145 LGALS1P09382 135 aaKnown RBP8.64□□□□□ -1.03
HPS4-202ENST00000398145 IFITM1P13164 125 aa8.64□□□□□ -1.03
HPS4-202ENST00000398145 LOXL1Q08397 574 aaPredicted RBP8.64□□□□□ -1.03
HPS4-202ENST00000398145 NTN5Q8WTR8 489 aaPredicted RBP8.64□□□□□ -1.03
HPS4-202ENST00000398145 MRPL53Q96EL3 112 aaKnown RBP8.64□□□□□ -1.03
HPS4-202ENST00000398145 ZNF48Q96MX3 618 aaPredicted RBP8.64□□□□□ -1.03
HPS4-202ENST00000398145 TEX22C9J3V5 150 aa8.64□□□□□ -1.03
HPS4-202ENST00000398145 TMEM86BQ8N661 226 aa8.64□□□□□ -1.03
HPS4-202ENST00000398145 NDUFA12Q9UI09 145 aa8.64□□□□□ -1.03
HPS4-202ENST00000398145 NAV3Q8IVL0 2385 aa8.64□□□□□ -1.03
HPS4-202ENST00000398145 IGLV11-55A0A075B6I3 123 aa8.64□□□□□ -1.03
HPS4-202ENST00000398145 CFC1BP0CG36 223 aa8.64□□□□□ -1.03
HPS4-202ENST00000398145 CFC1P0CG37 223 aa8.64□□□□□ -1.03
HPS4-202ENST00000398145 SPRY4Q9C004 299 aa8.64□□□□□ -1.03
HPS4-202ENST00000398145 PLA2G2CQ5R387 149 aa8.64□□□□□ -1.03
HPS4-202ENST00000398145 UTF1Q5T230 341 aa8.64□□□□□ -1.03
HPS4-202ENST00000398145 IGFL2Q6UWQ7 119 aa8.64□□□□□ -1.03
HPS4-202ENST00000398145 TRAV13-1A0A0B4J241 112 aa8.63□□□□□ -1.03
HPS4-202ENST00000398145 IGHV1-69DA0A0B4J2H0 117 aa8.63□□□□□ -1.03
HPS4-202ENST00000398145 GAGE12JA6NER3 117 aa8.63□□□□□ -1.03
HPS4-202ENST00000398145 GAGE7O76087 117 aa8.63□□□□□ -1.03
HPS4-202ENST00000398145 CTSGP08311 255 aa8.63□□□□□ -1.03
HPS4-202ENST00000398145 GAGE12FP0CL80 117 aa8.63□□□□□ -1.03
HPS4-202ENST00000398145 GAGE12GP0CL81 117 aa8.63□□□□□ -1.03
HPS4-202ENST00000398145 GAGE12IP0CL82 117 aa8.63□□□□□ -1.03
HPS4-202ENST00000398145 LINC00310P59036 64 aa8.63□□□□□ -1.03
HPS4-202ENST00000398145 GAGE4Q13068 117 aa8.63□□□□□ -1.03
HPS4-202ENST00000398145 ZNF625Q96I27 306 aaPredicted RBP8.63□□□□□ -1.03
HPS4-202ENST00000398145 SPINK13Q1W4C9 94 aa8.63□□□□□ -1.03
HPS4-202ENST00000398145 PHLDA1Q8WV24 401 aaPredicted RBP8.63□□□□□ -1.03
HPS4-202ENST00000398145 LEPROTO15243 131 aa8.63□□□□□ -1.03
HPS4-202ENST00000398145 PAX4O43316 350 aa8.63□□□□□ -1.03
HPS4-202ENST00000398145 IGLV1-47P01700 117 aa8.63□□□□□ -1.03
HPS4-202ENST00000398145 CHCHD5Q9BSY4 110 aa8.63□□□□□ -1.03
HPS4-202ENST00000398145 CFAP161Q6P656 301 aa8.62□□□□□ -1.03
HPS4-202ENST00000398145 TEN1Q86WV5 123 aa8.62□□□□□ -1.03
HPS4-202ENST00000398145 GATD1Q8NB37 220 aa8.62□□□□□ -1.03
HPS4-202ENST00000398145 TRGV4A0A0C4DH28 118 aa8.62□□□□□ -1.03
HPS4-202ENST00000398145 PRR30Q53SZ7 412 aaPredicted RBP8.62□□□□□ -1.03
HPS4-202ENST00000398145 C1orf229Q6ZS94 237 aaPredicted RBP8.62□□□□□ -1.03
HPS4-202ENST00000398145 PIP4P2Q8N4L2 257 aa8.62□□□□□ -1.03
HPS4-202ENST00000398145 EML5Q05BV3 1969 aa8.62□□□□□ -1.03
HPS4-202ENST00000398145 IGHV1OR15-1A0A075B7D0 117 aa8.62□□□□□ -1.03
HPS4-202ENST00000398145 WI2-2373I1.2A0A1W2PRP0 233 aa8.62□□□□□ -1.03
HPS4-202ENST00000398145 BUB3O43684 328 aa8.62□□□□□ -1.03
HPS4-202ENST00000398145 Q8N7P7 452 aa8.62□□□□□ -1.03
HPS4-202ENST00000398145 LINC00574Q9H8X3 128 aa8.62□□□□□ -1.03
HPS4-202ENST00000398145 NUP210LQ5VU65 1888 aa8.62□□□□□ -1.03
HPS4-202ENST00000398145 CSPG4Q6UVK1 2322 aa8.62□□□□□ -1.03
HPS4-202ENST00000398145 KNCNA6PVL3 124 aa8.62□□□□□ -1.03
HPS4-202ENST00000398145 GAGE5Q13069 117 aa8.62□□□□□ -1.03
HPS4-202ENST00000398145 GAGE6Q13070 117 aa8.62□□□□□ -1.03
HPS4-202ENST00000398145 TRGV1A0A0A0MS02 117 aa8.61□□□□□ -1.03
HPS4-202ENST00000398145 RHODO00212 210 aa8.61□□□□□ -1.03
HPS4-202ENST00000398145 INAFM2P0DMQ5 153 aa8.61□□□□□ -1.03
HPS4-202ENST00000398145 C9orf153Q5TBE3 101 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 104 ms