RNA–Protein interactions for RNA: ENST00000395896.8

VPS13C-203, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 14,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-203ENST00000395896 C9JQL5 133 aa2.64□□□□□ -1.99
VPS13C-203ENST00000395896 SAP30O75446 220 aa2.64□□□□□ -1.99
VPS13C-203ENST00000395896 SPRNQ5BIV9 151 aa2.64□□□□□ -1.99
VPS13C-203ENST00000395896 ARMS2P0C7Q2 107 aa2.63□□□□□ -1.99
VPS13C-203ENST00000395896 TFPI2P48307 235 aa2.63□□□□□ -1.99
VPS13C-203ENST00000395896 MLANAQ16655 118 aa2.63□□□□□ -1.99
VPS13C-203ENST00000395896 FAM74A4Q5TZK3 123 aa2.63□□□□□ -1.99
VPS13C-203ENST00000395896 NIT1Q86X76 327 aa2.63□□□□□ -1.99
VPS13C-203ENST00000395896 ZNF295-AS1Q8N0V1 137 aa2.63□□□□□ -1.99
VPS13C-203ENST00000395896 OR2K2Q8NGT1 345 aa2.63□□□□□ -1.99
VPS13C-203ENST00000395896 LINC01587Q99440 93 aa2.63□□□□□ -1.99
VPS13C-203ENST00000395896 CNFNQ9BYD5 112 aa2.63□□□□□ -1.99
VPS13C-203ENST00000395896 BATFQ16520 125 aa2.63□□□□□ -1.99
VPS13C-203ENST00000395896 IFI27L1Q96BM0 104 aa2.63□□□□□ -1.99
VPS13C-203ENST00000395896 HOXA3O43365 443 aaPredicted RBP2.63□□□□□ -1.99
VPS13C-203ENST00000395896 VAMP3Q15836 100 aa2.63□□□□□ -1.99
VPS13C-203ENST00000395896 ALKBH7Q9BT30 221 aaPredicted RBP2.63□□□□□ -1.99
VPS13C-203ENST00000395896 MLST8Q9BVC4 326 aa2.63□□□□□ -1.99
VPS13C-203ENST00000395896 D6R8Y8 96 aa2.63□□□□□ -1.99
VPS13C-203ENST00000395896 E7EUB6 86 aa2.63□□□□□ -1.99
VPS13C-203ENST00000395896 SMAD7O15105 426 aaKnown RBP2.63□□□□□ -1.99
VPS13C-203ENST00000395896 ZNF207O43670 478 aaKnown RBP2.63□□□□□ -1.99
VPS13C-203ENST00000395896 CNTFRP26992 372 aa2.63□□□□□ -1.99
VPS13C-203ENST00000395896 K7ERU9 68 aa2.63□□□□□ -1.99
VPS13C-203ENST00000395896 KIAA1644Q3SXP7 199 aa2.63□□□□□ -1.99
VPS13C-203ENST00000395896 FCN3O75636 299 aa2.63□□□□□ -1.99
VPS13C-203ENST00000395896 PSMB8P28062 276 aa2.63□□□□□ -1.99
VPS13C-203ENST00000395896 TRPT1Q86TN4 253 aaKnown RBP2.63□□□□□ -1.99
VPS13C-203ENST00000395896 IGHV3-49A0A0A0MS15 119 aa2.63□□□□□ -1.99
VPS13C-203ENST00000395896 VCX2Q9H322 139 aa2.63□□□□□ -1.99
VPS13C-203ENST00000395896 CR1P17927 2039 aa2.63□□□□□ -1.99
VPS13C-203ENST00000395896 BSNQ9UPA5 3926 aa2.63□□□□□ -1.99
VPS13C-203ENST00000395896 H3BTX0 84 aa2.63□□□□□ -1.99
VPS13C-203ENST00000395896 BLCAPP62952 87 aa2.63□□□□□ -1.99
VPS13C-203ENST00000395896 C18orf32Q8TCD1 76 aa2.63□□□□□ -1.99
VPS13C-203ENST00000395896 TMEM160Q9NX00 188 aa2.63□□□□□ -1.99
VPS13C-203ENST00000395896 PPIFP30405 207 aaKnown RBP2.63□□□□□ -1.99
VPS13C-203ENST00000395896 GNG5P63218 68 aa2.63□□□□□ -1.99
VPS13C-203ENST00000395896 PRADC1Q9BSG0 188 aa2.63□□□□□ -1.99
VPS13C-203ENST00000395896 S4R3C0 116 aa2.63□□□□□ -1.99
VPS13C-203ENST00000395896 DPM2O94777 84 aa2.63□□□□□ -1.99
VPS13C-203ENST00000395896 IGHV4-59P01825 116 aa2.63□□□□□ -1.99
VPS13C-203ENST00000395896 TCTAP57738 103 aa2.63□□□□□ -1.99
VPS13C-203ENST00000395896 SCGB3A1Q96QR1 104 aa2.63□□□□□ -1.99
VPS13C-203ENST00000395896 CCL24O00175 119 aa2.63□□□□□ -1.99
VPS13C-203ENST00000395896 CTRLP40313 264 aa2.63□□□□□ -1.99
VPS13C-203ENST00000395896 CRYBA4P53673 196 aa2.63□□□□□ -1.99
VPS13C-203ENST00000395896 LINC01545Q5VT33 79 aa2.63□□□□□ -1.99
VPS13C-203ENST00000395896 ESDP10768 282 aa2.63□□□□□ -1.99
VPS13C-203ENST00000395896 LYZL1Q6UWQ5 148 aa2.63□□□□□ -1.99
VPS13C-203ENST00000395896 Q6YL49 198 aa2.63□□□□□ -1.99
VPS13C-203ENST00000395896 COX8CQ7Z4L0 72 aa2.63□□□□□ -1.99
VPS13C-203ENST00000395896 C4orf3Q8WVX3 66 aa2.63□□□□□ -1.99
VPS13C-203ENST00000395896 CYYR1Q96J86 154 aa2.63□□□□□ -1.99
VPS13C-203ENST00000395896 A6NDX4 124 aa2.62□□□□□ -1.99
VPS13C-203ENST00000395896 FAM120AOSQ5T036 256 aa2.62□□□□□ -1.99
VPS13C-203ENST00000395896 IGKV1D-37A0A075B6S9 117 aa2.62□□□□□ -1.99
VPS13C-203ENST00000395896 IGHV1OR15-1A0A075B7D0 117 aa2.62□□□□□ -1.99
VPS13C-203ENST00000395896 CLPSL1A2RUU4 121 aa2.62□□□□□ -1.99
VPS13C-203ENST00000395896 CA1P00915 261 aaPredicted RBP2.62□□□□□ -1.99
VPS13C-203ENST00000395896 RNASE4P34096 147 aaKnown RBP2.62□□□□□ -1.99
VPS13C-203ENST00000395896 SPATA45Q537H7 98 aa2.62□□□□□ -1.99
VPS13C-203ENST00000395896 C5orf30Q96GV9 206 aa2.62□□□□□ -1.99
VPS13C-203ENST00000395896 LINC00479Q96M42 142 aa2.62□□□□□ -1.99
VPS13C-203ENST00000395896 FAM110AQ9BQ89 295 aa2.62□□□□□ -1.99
VPS13C-203ENST00000395896 IGHV3OR16-8A0A075B7F1 116 aa2.62□□□□□ -1.99
VPS13C-203ENST00000395896 SH2D1AO60880 128 aa2.62□□□□□ -1.99
VPS13C-203ENST00000395896 NDPQ00604 133 aa2.62□□□□□ -1.99
VPS13C-203ENST00000395896 TRBV10-1A0A0K0K1A3 114 aa2.62□□□□□ -1.99
VPS13C-203ENST00000395896 ADMP35318 185 aa2.62□□□□□ -1.99
VPS13C-203ENST00000395896 NMUP48645 174 aa2.62□□□□□ -1.99
VPS13C-203ENST00000395896 RUSC1-AS1Q66K80 236 aa2.62□□□□□ -1.99
VPS13C-203ENST00000395896 LOC389332A0A1B0GUA5 103 aa2.62□□□□□ -1.99
VPS13C-203ENST00000395896 SPATA12Q7Z6I5 190 aa2.62□□□□□ -1.99
VPS13C-203ENST00000395896 DNAJC30Q96LL9 226 aa2.62□□□□□ -1.99
VPS13C-203ENST00000395896 H3BVH4 76 aa2.62□□□□□ -1.99
VPS13C-203ENST00000395896 LINC00527Q9UJ94 153 aa2.62□□□□□ -1.99
VPS13C-203ENST00000395896 IGHV3-23P01764 117 aa2.62□□□□□ -1.99
VPS13C-203ENST00000395896 C19orf54Q5BKX5 351 aa2.62□□□□□ -1.99
VPS13C-203ENST00000395896 MORN3Q6PF18 240 aaPredicted RBP2.62□□□□□ -1.99
VPS13C-203ENST00000395896 TMEM141Q96I45 108 aa2.62□□□□□ -1.99
VPS13C-203ENST00000395896 SYS1-DBNDD2H3BUS1 97 aa2.62□□□□□ -1.99
VPS13C-203ENST00000395896 IGHV4-38-2P0DP08 117 aa2.62□□□□□ -1.99
VPS13C-203ENST00000395896 FABP2P12104 132 aa2.62□□□□□ -1.99
VPS13C-203ENST00000395896 C3orf56Q8N813 242 aa2.62□□□□□ -1.99
VPS13C-203ENST00000395896 TMEM238C9JI98 176 aa2.62□□□□□ -1.99
VPS13C-203ENST00000395896 GZMBP10144 247 aa2.62□□□□□ -1.99
VPS13C-203ENST00000395896 RNF182Q8N6D2 247 aa2.62□□□□□ -1.99
VPS13C-203ENST00000395896 IGKV2-40A0A087WW87 121 aaPredicted RBP2.62□□□□□ -1.99
VPS13C-203ENST00000395896 F8VRH5 84 aa2.62□□□□□ -1.99
VPS13C-203ENST00000395896 IGKV2D-40P01614 121 aaPredicted RBP2.62□□□□□ -1.99
VPS13C-203ENST00000395896 RHOHQ15669 191 aa2.62□□□□□ -1.99
VPS13C-203ENST00000395896 AGPAT4-IT1Q9H0P7 198 aa2.62□□□□□ -1.99
VPS13C-203ENST00000395896 ZFHX3Q15911 3703 aa2.61□□□□□ -1.99
VPS13C-203ENST00000395896 C7orf71A4D174 169 aa2.61□□□□□ -1.99
VPS13C-203ENST00000395896 CD5LO43866 347 aa2.61□□□□□ -1.99
VPS13C-203ENST00000395896 KLF5Q13887 457 aaPredicted RBP2.61□□□□□ -1.99
VPS13C-203ENST00000395896 OR4C5Q8NGB2 326 aa2.61□□□□□ -1.99
VPS13C-203ENST00000395896 C1orf159Q96HA4 380 aa2.61□□□□□ -1.99
VPS13C-203ENST00000395896 MYCNOSP40205 109 aa2.61□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 175.6 ms