RNA–Protein interactions for RNA: ENST00000381089.7

VCX3A-201, Transcript of variable charge X-linked 3A, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VCX3A, Length 995 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-201ENST00000381089 KRTAP10-1P60331 282 aa10.88□□□□□ -0.67
VCX3A-201ENST00000381089 SLC51BQ86UW2 128 aa10.88□□□□□ -0.67
VCX3A-201ENST00000381089 FAM19A4Q96LR4 140 aa10.88□□□□□ -0.67
VCX3A-201ENST00000381089 C8orf49Q96NF6 230 aa10.88□□□□□ -0.67
VCX3A-201ENST00000381089 AGPAT4-IT1Q9H0P7 198 aa10.88□□□□□ -0.67
VCX3A-201ENST00000381089 MRPL16Q9NX20 251 aaKnown RBP10.88□□□□□ -0.67
VCX3A-201ENST00000381089 TMEM14CQ9P0S9 112 aa10.88□□□□□ -0.67
VCX3A-201ENST00000381089 IGHV1OR15-1A0A075B7D0 117 aa10.87□□□□□ -0.67
VCX3A-201ENST00000381089 TRGV4A0A0C4DH28 118 aa10.87□□□□□ -0.67
VCX3A-201ENST00000381089 OR7C2O60412 319 aa10.87□□□□□ -0.67
VCX3A-201ENST00000381089 CDC34P49427 236 aaPredicted RBP10.87□□□□□ -0.67
VCX3A-201ENST00000381089 ZNF415Q09FC8 603 aa10.87□□□□□ -0.67
VCX3A-201ENST00000381089 C9orf47Q6ZRZ4 202 aa10.87□□□□□ -0.67
VCX3A-201ENST00000381089 FAM167A-AS1Q96KT0 104 aa10.87□□□□□ -0.67
VCX3A-201ENST00000381089 VPS13BQ7Z7G8 4022 aa10.87□□□□□ -0.67
VCX3A-201ENST00000381089 OR10J4P0C629 311 aa10.86□□□□□ -0.67
VCX3A-201ENST00000381089 SEC11BP0C7V7 166 aa10.86□□□□□ -0.67
VCX3A-201ENST00000381089 KHDC3LQ587J8 217 aa10.86□□□□□ -0.67
VCX3A-201ENST00000381089 C10orf126Q8N4M7 172 aa10.86□□□□□ -0.67
VCX3A-201ENST00000381089 BLNKQ8WV28 456 aa10.86□□□□□ -0.67
VCX3A-201ENST00000381089 RAB24Q969Q5 203 aa10.86□□□□□ -0.67
VCX3A-201ENST00000381089 ACTR3CQ9C0K3 210 aaPredicted RBP10.86□□□□□ -0.67
VCX3A-201ENST00000381089 MYCBP2O75592 4640 aa10.85□□□□□ -0.67
VCX3A-201ENST00000381089 NDUFB4O95168 129 aa10.85□□□□□ -0.67
VCX3A-201ENST00000381089 ORM1P02763 201 aa10.85□□□□□ -0.67
VCX3A-201ENST00000381089 SMR3BP02814 79 aaPredicted RBP10.85□□□□□ -0.67
VCX3A-201ENST00000381089 FHITP49789 147 aa10.85□□□□□ -0.67
VCX3A-201ENST00000381089 TAS2R45P59539 299 aa10.85□□□□□ -0.67
VCX3A-201ENST00000381089 UBE2L3P68036 154 aaKnown RBP10.85□□□□□ -0.67
VCX3A-201ENST00000381089 FHL2Q14192 279 aa10.85□□□□□ -0.67
VCX3A-201ENST00000381089 ZNF726P1Q15940 193 aa10.85□□□□□ -0.67
VCX3A-201ENST00000381089 EXOC3-AS1Q8N2X6 119 aa10.85□□□□□ -0.67
VCX3A-201ENST00000381089 FAM213BQ8TBF2 198 aa10.85□□□□□ -0.67
VCX3A-201ENST00000381089 PAXXQ9BUH6 204 aa10.85□□□□□ -0.67
VCX3A-201ENST00000381089 OR51M1Q9H341 326 aa10.85□□□□□ -0.67
VCX3A-201ENST00000381089 TP53TG3Q9ULZ0 132 aa10.85□□□□□ -0.67
VCX3A-201ENST00000381089 K7EQD1 137 aa10.84□□□□□ -0.67
VCX3A-201ENST00000381089 FAM74A1Q5RGS3 127 aa10.84□□□□□ -0.67
VCX3A-201ENST00000381089 EIF5AL1Q6IS14 154 aaKnown RBP10.84□□□□□ -0.67
VCX3A-201ENST00000381089 Q6ZSN1 163 aa10.84□□□□□ -0.67
VCX3A-201ENST00000381089 IQCF2Q8IXL9 164 aa10.84□□□□□ -0.67
VCX3A-201ENST00000381089 ZFAND2AQ8N6M9 145 aa10.84□□□□□ -0.67
VCX3A-201ENST00000381089 TXNDC17Q9BRA2 123 aa10.84□□□□□ -0.67
VCX3A-201ENST00000381089 IGKV2-40A0A087WW87 121 aaPredicted RBP10.83□□□□□ -0.68
VCX3A-201ENST00000381089 PSCAO43653 123 aa10.83□□□□□ -0.68
VCX3A-201ENST00000381089 IGKV2D-40P01614 121 aaPredicted RBP10.83□□□□□ -0.68
VCX3A-201ENST00000381089 CRYGDP07320 174 aa10.83□□□□□ -0.68
VCX3A-201ENST00000381089 ARL14EPLP0DKL9 152 aa10.83□□□□□ -0.68
VCX3A-201ENST00000381089 WFDC10BQ8IUB3 73 aa10.83□□□□□ -0.68
VCX3A-201ENST00000381089 FXYD5Q96DB9 178 aa10.83□□□□□ -0.68
VCX3A-201ENST00000381089 ZNF492Q9P255 531 aa10.83□□□□□ -0.68
VCX3A-201ENST00000381089 FLG2Q5D862 2391 aaPredicted RBP10.82□□□□□ -0.68
VCX3A-201ENST00000381089 IGLV5-52A0A0A0MRZ9 124 aa10.82□□□□□ -0.68
VCX3A-201ENST00000381089 TRBV7-9A0A0J9YWB2 115 aa10.82□□□□□ -0.68
VCX3A-201ENST00000381089 CTXND1A0A1B0GTU2 59 aa10.82□□□□□ -0.68
VCX3A-201ENST00000381089 A0A1B0GV50 99 aa10.82□□□□□ -0.68
VCX3A-201ENST00000381089 MAP1LC3B2A6NCE7 125 aa10.82□□□□□ -0.68
VCX3A-201ENST00000381089 UMAD1C9J7I0 102 aa10.82□□□□□ -0.68
VCX3A-201ENST00000381089 C9JCJ5 164 aa10.82□□□□□ -0.68
VCX3A-201ENST00000381089 GYPEP15421 78 aa10.82□□□□□ -0.68
VCX3A-201ENST00000381089 ZNF138P52744 262 aa10.82□□□□□ -0.68
VCX3A-201ENST00000381089 FGF8P55075 233 aaPredicted RBP10.82□□□□□ -0.68
VCX3A-201ENST00000381089 ALKAL2Q6UX46 152 aa10.82□□□□□ -0.68
VCX3A-201ENST00000381089 NTN5Q8WTR8 489 aaPredicted RBP10.82□□□□□ -0.68
VCX3A-201ENST00000381089 TMEM70Q9BUB7 260 aa10.82□□□□□ -0.68
VCX3A-201ENST00000381089 MAP1LC3BQ9GZQ8 125 aa10.82□□□□□ -0.68
VCX3A-201ENST00000381089 MDFICQ9P1T7 246 aa10.82□□□□□ -0.68
VCX3A-201ENST00000381089 SRRM2Q9UQ35 2752 aaKnown RBP10.82□□□□□ -0.68
VCX3A-201ENST00000381089 J3QL48 77 aa10.81□□□□□ -0.68
VCX3A-201ENST00000381089 STAG3L2P0CL84 134 aa10.81□□□□□ -0.68
VCX3A-201ENST00000381089 STAG3L3P0CL85 134 aa10.81□□□□□ -0.68
VCX3A-201ENST00000381089 GCHFRP30047 84 aa10.81□□□□□ -0.68
VCX3A-201ENST00000381089 CSN1S1P47710 185 aa10.81□□□□□ -0.68
VCX3A-201ENST00000381089 PRR9Q5T870 116 aa10.81□□□□□ -0.68
VCX3A-201ENST00000381089 PQLC2Q6ZP29 291 aa10.81□□□□□ -0.68
VCX3A-201ENST00000381089 SH2D6Q7Z4S9 175 aa10.81□□□□□ -0.68
VCX3A-201ENST00000381089 PHYHIPLQ96FC7 376 aa10.81□□□□□ -0.68
VCX3A-201ENST00000381089 SPXQ9BT56 116 aa10.81□□□□□ -0.68
VCX3A-201ENST00000381089 NBEAP1P0C6P0 100 aa10.8□□□□□ -0.68
VCX3A-201ENST00000381089 SFTA3P0C7M3 94 aa10.8□□□□□ -0.68
VCX3A-201ENST00000381089 TRGV11A0A075B6L2 103 aa10.79□□□□□ -0.68
VCX3A-201ENST00000381089 CXorf1O96002 111 aa10.79□□□□□ -0.68
VCX3A-201ENST00000381089 SULT1A2P50226 295 aa10.79□□□□□ -0.68
VCX3A-201ENST00000381089 MUC21Q5SSG8 566 aa10.79□□□□□ -0.68
VCX3A-201ENST00000381089 FAM159AQ6UWV7 190 aa10.79□□□□□ -0.68
VCX3A-201ENST00000381089 SFT2D1Q8WV19 159 aa10.79□□□□□ -0.68
VCX3A-201ENST00000381089 RASL10AQ92737 203 aa10.79□□□□□ -0.68
VCX3A-201ENST00000381089 ZNF479Q96JC4 524 aa10.79□□□□□ -0.68
VCX3A-201ENST00000381089 RANP62826 216 aaKnown RBP10.78□□□□□ -0.68
VCX3A-201ENST00000381089 DPPA3Q6W0C5 159 aa10.78□□□□□ -0.68
VCX3A-201ENST00000381089 Q8TAT8 98 aa10.78□□□□□ -0.68
VCX3A-201ENST00000381089 TRAV4A0A0B4J268 109 aa10.77□□□□□ -0.69
VCX3A-201ENST00000381089 RBAKDNA6NC62 111 aa10.77□□□□□ -0.69
VCX3A-201ENST00000381089 H2AFB1P0C5Y9 115 aa10.77□□□□□ -0.69
VCX3A-201ENST00000381089 PPT1P50897 306 aa10.77□□□□□ -0.69
VCX3A-201ENST00000381089 RAB5CP51148 216 aa10.77□□□□□ -0.69
VCX3A-201ENST00000381089 TMEM183BQ1AE95 376 aa10.77□□□□□ -0.69
VCX3A-201ENST00000381089 Q6ZQT7 251 aa10.77□□□□□ -0.69
VCX3A-201ENST00000381089 TMEM183AQ8IXX5 376 aa10.77□□□□□ -0.69
VCX3A-201ENST00000381089 OR4C5Q8NGB2 326 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms