RNA–Protein interactions for RNA: ENST00000377625.6

TBC1D4-201, Transcript of TBC1 domain family member 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TBC1D4, Length 6,182 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D4-201ENST00000377625 RSPO3Q9BXY4 272 aaPredicted RBP14.95□□□□□ -0.02
TBC1D4-201ENST00000377625 WIPF3A6NGB9 483 aa14.94□□□□□ -0.02
TBC1D4-201ENST00000377625 PRSS33Q8NF86 280 aa14.94□□□□□ -0.02
TBC1D4-201ENST00000377625 IGLV3-1P01715 115 aa14.94□□□□□ -0.02
TBC1D4-201ENST00000377625 ZSWIM8A7E2V4 1837 aa14.94□□□□□ -0.02
TBC1D4-201ENST00000377625 CARD19Q96LW7 228 aa14.94□□□□□ -0.02
TBC1D4-201ENST00000377625 Q6ZQT7 251 aa14.94□□□□□ -0.02
TBC1D4-201ENST00000377625 ETDBQ3ZM63 59 aa14.93□□□□□ -0.02
TBC1D4-201ENST00000377625 TRAV12-1A0A0B4J245 112 aa14.93□□□□□ -0.02
TBC1D4-201ENST00000377625 CRYGCP07315 174 aa14.93□□□□□ -0.02
TBC1D4-201ENST00000377625 F8W1H4 67 aa14.93□□□□□ -0.02
TBC1D4-201ENST00000377625 DKK2Q9UBU2 259 aa14.93□□□□□ -0.02
TBC1D4-201ENST00000377625 IGKV2D-29A0A075B6S2 120 aaPredicted RBP14.92□□□□□ -0.02
TBC1D4-201ENST00000377625 IGKV2-29A2NJV5 120 aaPredicted RBP14.92□□□□□ -0.02
TBC1D4-201ENST00000377625 ZNF493Q6ZR52 646 aa14.92□□□□□ -0.02
TBC1D4-201ENST00000377625 IGLV2-23P01705 113 aa14.92□□□□□ -0.02
TBC1D4-201ENST00000377625 EGR2P11161 476 aaPredicted RBP14.92□□□□□ -0.02
TBC1D4-201ENST00000377625 SLX1AQ9BQ83 275 aa14.92□□□□□ -0.02
TBC1D4-201ENST00000377625 IGHG4P01861 327 aa14.92□□□□□ -0.02
TBC1D4-201ENST00000377625 Q9HAA7 133 aa14.92□□□□□ -0.02
TBC1D4-201ENST00000377625 BVES-AS1Q5T3Y7 98 aa14.92□□□□□ -0.02
TBC1D4-201ENST00000377625 CENPVL3A0A0U1RRI6 287 aa14.92□□□□□ -0.02
TBC1D4-201ENST00000377625 TINCRA0A1B0GVN0 87 aa14.91□□□□□ -0.02
TBC1D4-201ENST00000377625 APRG1Q8IVJ8 170 aa14.91□□□□□ -0.02
TBC1D4-201ENST00000377625 RBAKDNA6NC62 111 aa14.91□□□□□ -0.02
TBC1D4-201ENST00000377625 C11orf53Q8IXP5 236 aa14.91□□□□□ -0.02
TBC1D4-201ENST00000377625 K7EN84 100 aa14.91□□□□□ -0.02
TBC1D4-201ENST00000377625 IGFBPL1Q8WX77 278 aa14.91□□□□□ -0.02
TBC1D4-201ENST00000377625 K7EP34 96 aa14.9□□□□□ -0.02
TBC1D4-201ENST00000377625 hADV29S1A0JD25 119 aa14.9□□□□□ -0.02
TBC1D4-201ENST00000377625 DEFB113Q30KQ7 82 aa14.9□□□□□ -0.02
TBC1D4-201ENST00000377625 CREBBPQ92793 2442 aa14.9□□□□□ -0.02
TBC1D4-201ENST00000377625 K7ERJ3 54 aa14.9□□□□□ -0.02
TBC1D4-201ENST00000377625 IGHV4-61A0A0C4DH41 118 aa14.9□□□□□ -0.02
TBC1D4-201ENST00000377625 SLURP1P55000 103 aa14.9□□□□□ -0.02
TBC1D4-201ENST00000377625 DKK4Q9UBT3 224 aa14.89□□□□□ -0.03
TBC1D4-201ENST00000377625 CITED2Q99967 270 aaPredicted RBP14.89□□□□□ -0.03
TBC1D4-201ENST00000377625 DOCK11Q5JSL3 2073 aa14.89□□□□□ -0.03
TBC1D4-201ENST00000377625 LENEPQ9Y5L5 61 aa14.89□□□□□ -0.03
TBC1D4-201ENST00000377625 BOD1L2Q8IYS8 172 aa14.88□□□□□ -0.03
TBC1D4-201ENST00000377625 A0A1W2PPM0 123 aa14.88□□□□□ -0.03
TBC1D4-201ENST00000377625 Q9H8V8 135 aa14.88□□□□□ -0.03
TBC1D4-201ENST00000377625 IGHV4-38-2P0DP08 117 aa14.88□□□□□ -0.03
TBC1D4-201ENST00000377625 C9orf66Q5T8R8 295 aa14.88□□□□□ -0.03
TBC1D4-201ENST00000377625 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP14.88□□□□□ -0.031e-7■■■■■ 32.8
TBC1D4-201ENST00000377625 SPRY2O43597 315 aa14.88□□□□□ -0.03
TBC1D4-201ENST00000377625 SPRNQ5BIV9 151 aa14.88□□□□□ -0.03
TBC1D4-201ENST00000377625 C1orf43Q9BWL3 253 aa14.88□□□□□ -0.03
TBC1D4-201ENST00000377625 WT1P19544 449 aaPredicted RBP14.87□□□□□ -0.03
TBC1D4-201ENST00000377625 C10orf91Q5T1B1 145 aa14.87□□□□□ -0.03
TBC1D4-201ENST00000377625 PIFOQ8TCI5 191 aa14.87□□□□□ -0.03
TBC1D4-201ENST00000377625 SLC25A29Q8N8R3 303 aa14.87□□□□□ -0.03
TBC1D4-201ENST00000377625 DEFB105AQ8NG35 78 aa14.87□□□□□ -0.03
TBC1D4-201ENST00000377625 IGHV4-30-2A0A087WSY4 118 aa14.87□□□□□ -0.03
TBC1D4-201ENST00000377625 SPANXA1Q9NS26 97 aa14.86□□□□□ -0.03
TBC1D4-201ENST00000377625 K7EP13 123 aa14.86□□□□□ -0.03
TBC1D4-201ENST00000377625 H3BMG7 143 aa14.86□□□□□ -0.03
TBC1D4-201ENST00000377625 K7EMI3 77 aa14.85□□□□□ -0.03
TBC1D4-201ENST00000377625 GP9P14770 177 aa14.85□□□□□ -0.03
TBC1D4-201ENST00000377625 C5orf38Q86SI9 138 aa14.85□□□□□ -0.03
TBC1D4-201ENST00000377625 IGHV7-81A0A0B4J1V7 117 aa14.85□□□□□ -0.03
TBC1D4-201ENST00000377625 BUB3O43684 328 aa14.85□□□□□ -0.03
TBC1D4-201ENST00000377625 NDUFS5O43920 106 aa14.85□□□□□ -0.03
TBC1D4-201ENST00000377625 DOCK9Q9BZ29 2069 aa14.85□□□□□ -0.03
TBC1D4-201ENST00000377625 SIVA1O15304 175 aa14.85□□□□□ -0.03
TBC1D4-201ENST00000377625 AJUBAQ96IF1 538 aa14.85□□□□□ -0.03
TBC1D4-201ENST00000377625 Q8NFD4 153 aa14.84□□□□□ -0.03
TBC1D4-201ENST00000377625 NPBQ8NG41 125 aa14.84□□□□□ -0.03
TBC1D4-201ENST00000377625 RPL18AQ02543 176 aaKnown RBP14.84□□□□□ -0.03
TBC1D4-201ENST00000377625 WDR81Q562E7 1941 aa14.84□□□□□ -0.03
TBC1D4-201ENST00000377625 BLCAPP62952 87 aa14.84□□□□□ -0.03
TBC1D4-201ENST00000377625 ZNF747Q9BV97 191 aa14.84□□□□□ -0.03
TBC1D4-201ENST00000377625 PLXNA4Q9HCM2 1894 aa14.84□□□□□ -0.03
TBC1D4-201ENST00000377625 GYPEP15421 78 aa14.83□□□□□ -0.03
TBC1D4-201ENST00000377625 GATA1P15976 413 aaPredicted RBP14.83□□□□□ -0.03
TBC1D4-201ENST00000377625 C12orf74Q32Q52 190 aa14.83□□□□□ -0.03
TBC1D4-201ENST00000377625 C16orf74Q96GX8 76 aa14.83□□□□□ -0.03
TBC1D4-201ENST00000377625 KIAA1671Q9BY89 1806 aa14.83□□□□□ -0.04
TBC1D4-201ENST00000377625 HEATR5AQ86XA9 2040 aa14.82□□□□□ -0.04
TBC1D4-201ENST00000377625 AMTNQ6UX39 209 aa14.82□□□□□ -0.04
TBC1D4-201ENST00000377625 WIPF2Q8TF74 440 aaPredicted RBP14.82□□□□□ -0.04
TBC1D4-201ENST00000377625 TRAV4A0A0B4J268 109 aa14.82□□□□□ -0.04
TBC1D4-201ENST00000377625 PRB1P04280 392 aa14.82□□□□□ -0.04
TBC1D4-201ENST00000377625 CFC1BP0CG36 223 aa14.82□□□□□ -0.04
TBC1D4-201ENST00000377625 CFC1P0CG37 223 aa14.82□□□□□ -0.04
TBC1D4-201ENST00000377625 IFITM1P13164 125 aa14.82□□□□□ -0.04
TBC1D4-201ENST00000377625 HERV-K104P63124 156 aa14.82□□□□□ -0.04
TBC1D4-201ENST00000377625 MAJINQ3KP22 176 aa14.82□□□□□ -0.04
TBC1D4-201ENST00000377625 PCNX1Q96RV3 2341 aa14.82□□□□□ -0.04
TBC1D4-201ENST00000377625 ICOSQ9Y6W8 199 aa14.82□□□□□ -0.04
TBC1D4-201ENST00000377625 I3L2K1 104 aa14.81□□□□□ -0.04
TBC1D4-201ENST00000377625 MRPL23Q16540 153 aaKnown RBP14.81□□□□□ -0.04
TBC1D4-201ENST00000377625 IGFL2Q6UWQ7 119 aa14.81□□□□□ -0.04
TBC1D4-201ENST00000377625 SPART-AS1P0CW21 52 aa14.81□□□□□ -0.04
TBC1D4-201ENST00000377625 RNF152Q8N8N0 203 aa14.81□□□□□ -0.04
TBC1D4-201ENST00000377625 SPANXDQ9BXN6 97 aa14.81□□□□□ -0.04
TBC1D4-201ENST00000377625 ATP6V0E2Q8NHE4 81 aa14.81□□□□□ -0.04
TBC1D4-201ENST00000377625 ORMDL1Q9P0S3 153 aa14.81□□□□□ -0.04
TBC1D4-201ENST00000377625 IGHV4-4A0A075B6R2 117 aa14.81□□□□□ -0.04
TBC1D4-201ENST00000377625 IL15RAQ13261 267 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms