RNA–Protein interactions for RNA: ENST00000377298.8

CLSTN1-202, Transcript of calsyntenin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLSTN1, Length 5,221 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-202ENST00000377298 CTSGP08311 255 aa13.99□□□□□ -0.17
CLSTN1-202ENST00000377298 Q6ZWC4 215 aa13.99□□□□□ -0.17
CLSTN1-202ENST00000377298 C10orf126Q8N4M7 172 aa13.99□□□□□ -0.17
CLSTN1-202ENST00000377298 SIGMAR1Q99720 223 aa13.99□□□□□ -0.17
CLSTN1-202ENST00000377298 COX11Q9Y6N1 276 aa13.99□□□□□ -0.17
CLSTN1-202ENST00000377298 TMEM131Q92545 1883 aa13.98□□□□□ -0.17
CLSTN1-202ENST00000377298 F8WEM9 126 aa13.98□□□□□ -0.17
CLSTN1-202ENST00000377298 HLA-DMBP28068 263 aa13.98□□□□□ -0.17
CLSTN1-202ENST00000377298 NPC2P61916 151 aa13.98□□□□□ -0.17
CLSTN1-202ENST00000377298 ZNF106Q9H2Y7 1883 aaKnown RBP13.98□□□□□ -0.17
CLSTN1-202ENST00000377298 ATXN8Q156A1 80 aa13.98□□□□□ -0.17
CLSTN1-202ENST00000377298 GATD1Q8NB37 220 aa13.98□□□□□ -0.17
CLSTN1-202ENST00000377298 F6UB75 175 aa13.98□□□□□ -0.17
CLSTN1-202ENST00000377298 CGB3P0DN86 165 aa13.98□□□□□ -0.17
CLSTN1-202ENST00000377298 PMVKQ15126 192 aa13.98□□□□□ -0.17
CLSTN1-202ENST00000377298 INS-IGF2F8WCM5 200 aa13.97□□□□□ -0.17
CLSTN1-202ENST00000377298 SLURP1P55000 103 aa13.97□□□□□ -0.17
CLSTN1-202ENST00000377298 LEPROTO15243 131 aa13.97□□□□□ -0.17
CLSTN1-202ENST00000377298 CHAC1Q9BUX1 264 aa13.97□□□□□ -0.17
CLSTN1-202ENST00000377298 TMEM89A2RUT3 159 aa13.97□□□□□ -0.17
CLSTN1-202ENST00000377298 CDK2AP2O75956 126 aa13.97□□□□□ -0.17
CLSTN1-202ENST00000377298 IGLV2-23P01705 113 aa13.97□□□□□ -0.17
CLSTN1-202ENST00000377298 CRYGCP07315 174 aa13.97□□□□□ -0.17
CLSTN1-202ENST00000377298 CD5LO43866 347 aa13.96□□□□□ -0.17
CLSTN1-202ENST00000377298 ESDP10768 282 aa13.96□□□□□ -0.17
CLSTN1-202ENST00000377298 PLCE1Q9P212 2302 aa13.96□□□□□ -0.17
CLSTN1-202ENST00000377298 ODF3L1Q8IXM7 274 aa13.96□□□□□ -0.18
CLSTN1-202ENST00000377298 SMIM2Q9BVW6 85 aa13.96□□□□□ -0.18
CLSTN1-202ENST00000377298 PIEZO1Q92508 2521 aa13.95□□□□□ -0.18
CLSTN1-202ENST00000377298 C20orf78Q9BR46 151 aa13.95□□□□□ -0.18
CLSTN1-202ENST00000377298 TRAV26-2A0A0B4J265 109 aa13.95□□□□□ -0.18
CLSTN1-202ENST00000377298 IGLC2P0DOY2 106 aa13.95□□□□□ -0.18
CLSTN1-202ENST00000377298 IGLC3P0DOY3 106 aa13.95□□□□□ -0.18
CLSTN1-202ENST00000377298 LOXL1Q08397 574 aaPredicted RBP13.95□□□□□ -0.18
CLSTN1-202ENST00000377298 GP9P14770 177 aa13.95□□□□□ -0.18
CLSTN1-202ENST00000377298 IGHG2P01859 326 aa13.94□□□□□ -0.18
CLSTN1-202ENST00000377298 TRAV8-2A0A0B4J237 113 aa13.94□□□□□ -0.18
CLSTN1-202ENST00000377298 TEX22C9J3V5 150 aa13.94□□□□□ -0.18
CLSTN1-202ENST00000377298 C16orf54Q6UWD8 224 aa13.94□□□□□ -0.18
CLSTN1-202ENST00000377298 CDPF1Q6NVV7 123 aa13.94□□□□□ -0.18
CLSTN1-202ENST00000377298 LRRC75A-AS1Q8N1F1 130 aa13.94□□□□□ -0.18
CLSTN1-202ENST00000377298 RNF152Q8N8N0 203 aa13.94□□□□□ -0.18
CLSTN1-202ENST00000377298 FREM1Q5H8C1 2179 aa13.94□□□□□ -0.18
CLSTN1-202ENST00000377298 BUB3O43684 328 aa13.93□□□□□ -0.18
CLSTN1-202ENST00000377298 PLA2G2EQ9NZK7 142 aa13.93□□□□□ -0.18
CLSTN1-202ENST00000377298 HIVEP2P31629 2446 aa13.93□□□□□ -0.18
CLSTN1-202ENST00000377298 K7EMT4 169 aa13.93□□□□□ -0.18
CLSTN1-202ENST00000377298 CGB7P0DN87 165 aa13.93□□□□□ -0.18
CLSTN1-202ENST00000377298 HLA-DRB4P13762 266 aa13.93□□□□□ -0.18
CLSTN1-202ENST00000377298 RHOHQ15669 191 aa13.93□□□□□ -0.18
CLSTN1-202ENST00000377298 NEGR1Q7Z3B1 354 aa13.93□□□□□ -0.18
CLSTN1-202ENST00000377298 HLA-DRB4X5D2U9 266 aa13.93□□□□□ -0.18
CLSTN1-202ENST00000377298 IGHV3-38A0A0C4DH36 116 aa13.92□□□□□ -0.18
CLSTN1-202ENST00000377298 NPSP0C0P6 89 aa13.92□□□□□ -0.18
CLSTN1-202ENST00000377298 IGF2BP2-AS1Q96M15 143 aa13.92□□□□□ -0.18
CLSTN1-202ENST00000377298 EGR2P11161 476 aaPredicted RBP13.92□□□□□ -0.18
CLSTN1-202ENST00000377298 KIR3DS1Q14943 382 aa13.92□□□□□ -0.18
CLSTN1-202ENST00000377298 NPYP01303 97 aa13.92□□□□□ -0.18
CLSTN1-202ENST00000377298 GAGE6Q13070 117 aa13.92□□□□□ -0.18
CLSTN1-202ENST00000377298 SIGLEC8Q9NYZ4 499 aa13.92□□□□□ -0.18
CLSTN1-202ENST00000377298 C10orf142B7Z368 130 aa13.91□□□□□ -0.18
CLSTN1-202ENST00000377298 LMO4P61968 165 aa13.91□□□□□ -0.18
CLSTN1-202ENST00000377298 PATE2Q6UY27 113 aa13.91□□□□□ -0.18
CLSTN1-202ENST00000377298 DENND4AQ7Z401 1863 aa13.91□□□□□ -0.18
CLSTN1-202ENST00000377298 GNRH2O43555 120 aa13.91□□□□□ -0.18
CLSTN1-202ENST00000377298 STPG4Q8N801 248 aa13.91□□□□□ -0.18
CLSTN1-202ENST00000377298 LAMTOR3Q9UHA4 124 aa13.91□□□□□ -0.18
CLSTN1-202ENST00000377298 K7EN84 100 aa13.91□□□□□ -0.18
CLSTN1-202ENST00000377298 IGLV2-14P01704 120 aa13.91□□□□□ -0.18
CLSTN1-202ENST00000377298 DLX4Q92988 240 aaPredicted RBP13.91□□□□□ -0.18
CLSTN1-202ENST00000377298 OVOL2Q9BRP0 275 aa13.9□□□□□ -0.18
CLSTN1-202ENST00000377298 U3KQE9 123 aa13.9□□□□□ -0.18
CLSTN1-202ENST00000377298 C19orf84I3L1E1 186 aa13.9□□□□□ -0.18
CLSTN1-202ENST00000377298 CFHR4Q92496 578 aa13.9□□□□□ -0.18
CLSTN1-202ENST00000377298 NOP10Q9NPE3 64 aaKnown RBP13.9□□□□□ -0.18
CLSTN1-202ENST00000377298 IGHV4OR15-8A0A075B7B6 117 aa13.9□□□□□ -0.18
CLSTN1-202ENST00000377298 A0A087WW49 117 aa13.9□□□□□ -0.18
CLSTN1-202ENST00000377298 GPHB5Q86YW7 130 aa13.9□□□□□ -0.18
CLSTN1-202ENST00000377298 FSTL3O95633 263 aa13.9□□□□□ -0.18
CLSTN1-202ENST00000377298 LINC00574Q9H8X3 128 aa13.9□□□□□ -0.18
CLSTN1-202ENST00000377298 A0A096LPF7 62 aa13.89□□□□□ -0.19
CLSTN1-202ENST00000377298 WI2-2373I1.2A0A1W2PRP0 233 aa13.89□□□□□ -0.19
CLSTN1-202ENST00000377298 PCDH15Q96QU1 1955 aa13.89□□□□□ -0.19
CLSTN1-202ENST00000377298 TNFRSF13BO14836 293 aaPredicted RBP13.89□□□□□ -0.19
CLSTN1-202ENST00000377298 EML6Q6ZMW3 1958 aa13.89□□□□□ -0.19
CLSTN1-202ENST00000377298 NCKAP5O14513 1909 aa13.89□□□□□ -0.19
CLSTN1-202ENST00000377298 MYCNOSP40205 109 aa13.89□□□□□ -0.19
CLSTN1-202ENST00000377298 ZNF493Q6ZR52 646 aa13.89□□□□□ -0.19
CLSTN1-202ENST00000377298 APRG1Q8IVJ8 170 aa13.89□□□□□ -0.19
CLSTN1-202ENST00000377298 A6NDX4 124 aa13.89□□□□□ -0.19
CLSTN1-202ENST00000377298 PIFOQ8TCI5 191 aa13.89□□□□□ -0.19
CLSTN1-202ENST00000377298 WIPF2Q8TF74 440 aaPredicted RBP13.88□□□□□ -0.19
CLSTN1-202ENST00000377298 IGHV1-24A0A0C4DH33 117 aa13.88□□□□□ -0.19
CLSTN1-202ENST00000377298 KIAA1549LQ6ZVL6 1849 aa13.88□□□□□ -0.19
CLSTN1-202ENST00000377298 CLPSL1A2RUU4 121 aa13.87□□□□□ -0.19
CLSTN1-202ENST00000377298 C2orf70A6NJV1 201 aa13.87□□□□□ -0.19
CLSTN1-202ENST00000377298 COA6Q5JTJ3 125 aaKnown RBP13.87□□□□□ -0.19
CLSTN1-202ENST00000377298 NKAPP1Q8N9T2 125 aa13.87□□□□□ -0.19
CLSTN1-202ENST00000377298 TRAV25A0A0B4J276 109 aa13.87□□□□□ -0.19
CLSTN1-202ENST00000377298 LGALS9BQ3B8N2 356 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms