RNA–Protein interactions for RNA: ENST00000366290.2

YBX3-204, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 512 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-204ENST00000366290 PRB4P10163 310 aaPredicted RBP5.57□□□□□ -1.52
YBX3-204ENST00000366290 SULT1A2P50226 295 aa5.57□□□□□ -1.52
YBX3-204ENST00000366290 TAS2R45P59539 299 aa5.57□□□□□ -1.52
YBX3-204ENST00000366290 PDE6HQ13956 83 aa5.57□□□□□ -1.52
YBX3-204ENST00000366290 DEFB135Q30KP9 77 aa5.57□□□□□ -1.52
YBX3-204ENST00000366290 CD164L2Q6UWJ8 174 aa5.57□□□□□ -1.52
YBX3-204ENST00000366290 C11orf45Q8TAV5 145 aa5.57□□□□□ -1.52
YBX3-204ENST00000366290 SLC50A1Q9BRV3 221 aa5.57□□□□□ -1.52
YBX3-204ENST00000366290 ACTR3CQ9C0K3 210 aaPredicted RBP5.57□□□□□ -1.52
YBX3-204ENST00000366290 ZNF705FA8MVS1 300 aaPredicted RBP5.56□□□□□ -1.52
YBX3-204ENST00000366290 UMAD1C9J7I0 102 aa5.56□□□□□ -1.52
YBX3-204ENST00000366290 F6UB75 175 aa5.56□□□□□ -1.52
YBX3-204ENST00000366290 M0R3E3 92 aa5.56□□□□□ -1.52
YBX3-204ENST00000366290 GCHFRP30047 84 aa5.56□□□□□ -1.52
YBX3-204ENST00000366290 ID1P41134 155 aa5.56□□□□□ -1.52
YBX3-204ENST00000366290 FGF8P55075 233 aaPredicted RBP5.56□□□□□ -1.52
YBX3-204ENST00000366290 SNRPD3P62318 126 aaKnown RBP5.56□□□□□ -1.52
YBX3-204ENST00000366290 UBE2L3P68036 154 aaKnown RBP5.56□□□□□ -1.52
YBX3-204ENST00000366290 PSG3Q16557 428 aa5.56□□□□□ -1.52
YBX3-204ENST00000366290 GUK1Q16774 197 aa5.56□□□□□ -1.52
YBX3-204ENST00000366290 FAM74A1Q5RGS3 127 aa5.56□□□□□ -1.52
YBX3-204ENST00000366290 SAMD13Q5VXD3 122 aa5.56□□□□□ -1.52
YBX3-204ENST00000366290 EXOC3-AS1Q8N2X6 119 aa5.56□□□□□ -1.52
YBX3-204ENST00000366290 FAM213BQ8TBF2 198 aa5.56□□□□□ -1.52
YBX3-204ENST00000366290 BLNKQ8WV28 456 aa5.56□□□□□ -1.52
YBX3-204ENST00000366290 MBD3L1Q8WWY6 194 aa5.56□□□□□ -1.52
YBX3-204ENST00000366290 LINC00052Q96N35 136 aa5.56□□□□□ -1.52
YBX3-204ENST00000366290 SAV1Q9H4B6 383 aaPredicted RBP5.56□□□□□ -1.52
YBX3-204ENST00000366290 A0A0J9YWU9 116 aa5.55□□□□□ -1.52
YBX3-204ENST00000366290 A0A0J9YX75 114 aa5.55□□□□□ -1.52
YBX3-204ENST00000366290 MAP1LC3B2A6NCE7 125 aa5.55□□□□□ -1.52
YBX3-204ENST00000366290 A8MTW9 85 aa5.55□□□□□ -1.52
YBX3-204ENST00000366290 H3BMM0 161 aa5.55□□□□□ -1.52
YBX3-204ENST00000366290 HLA-DRB4P13762 266 aa5.55□□□□□ -1.52
YBX3-204ENST00000366290 KRTAP10-7P60409 375 aaPredicted RBP5.55□□□□□ -1.52
YBX3-204ENST00000366290 ACTL10Q5JWF8 245 aa5.55□□□□□ -1.52
YBX3-204ENST00000366290 ZFAND6Q6FIF0 208 aa5.55□□□□□ -1.52
YBX3-204ENST00000366290 MORN3Q6PF18 240 aaPredicted RBP5.55□□□□□ -1.52
YBX3-204ENST00000366290 ALKAL2Q6UX46 152 aa5.55□□□□□ -1.52
YBX3-204ENST00000366290 DPPA3Q6W0C5 159 aa5.55□□□□□ -1.52
YBX3-204ENST00000366290 FOXI2Q6ZQN5 318 aa5.55□□□□□ -1.52
YBX3-204ENST00000366290 CSNK1G2-AS1Q8NCQ2 148 aa5.55□□□□□ -1.52
YBX3-204ENST00000366290 LINC00479Q96M42 142 aa5.55□□□□□ -1.52
YBX3-204ENST00000366290 MAP1LC3BQ9GZQ8 125 aa5.55□□□□□ -1.52
YBX3-204ENST00000366290 Q9H3A6 140 aa5.55□□□□□ -1.52
YBX3-204ENST00000366290 C11orf68Q9H3H3 251 aaKnown RBP5.55□□□□□ -1.52
YBX3-204ENST00000366290 HLA-DRB4X5D2U9 266 aa5.55□□□□□ -1.52
YBX3-204ENST00000366290 GGTLC3B5MD39 225 aa5.54□□□□□ -1.52
YBX3-204ENST00000366290 NXPH4O95158 308 aa5.54□□□□□ -1.52
YBX3-204ENST00000366290 CXorf1O96002 111 aa5.54□□□□□ -1.52
YBX3-204ENST00000366290 CA1P00915 261 aaPredicted RBP5.54□□□□□ -1.52
YBX3-204ENST00000366290 ZNF705DP0CH99 300 aaPredicted RBP5.54□□□□□ -1.52
YBX3-204ENST00000366290 ZNF705BP0CI00 300 aaPredicted RBP5.54□□□□□ -1.52
YBX3-204ENST00000366290 RAB5CP51148 216 aa5.54□□□□□ -1.52
YBX3-204ENST00000366290 RANP62826 216 aaKnown RBP5.54□□□□□ -1.52
YBX3-204ENST00000366290 PSG9Q00887 426 aa5.54□□□□□ -1.52
YBX3-204ENST00000366290 C14orf177Q52M58 125 aa5.54□□□□□ -1.52
YBX3-204ENST00000366290 EIF5AL1Q6IS14 154 aaKnown RBP5.54□□□□□ -1.52
YBX3-204ENST00000366290 AMTNQ6UX39 209 aa5.54□□□□□ -1.52
YBX3-204ENST00000366290 STHQ8IWL8 128 aa5.54□□□□□ -1.52
YBX3-204ENST00000366290 ZNF738Q8NE65 137 aa5.54□□□□□ -1.52
YBX3-204ENST00000366290 OR8A1Q8NGG7 326 aa5.54□□□□□ -1.52
YBX3-204ENST00000366290 RPUSD4Q96CM3 377 aaKnown RBP5.54□□□□□ -1.52
YBX3-204ENST00000366290 MRPL53Q96EL3 112 aaKnown RBP5.54□□□□□ -1.52
YBX3-204ENST00000366290 TMEM167BQ9NRX6 74 aa5.54□□□□□ -1.52
YBX3-204ENST00000366290 YTHDF2Q9Y5A9 579 aaKnown RBP5.54□□□□□ -1.52
YBX3-204ENST00000366290 VPS13DQ5THJ4 4388 aa5.53□□□□□ -1.52
YBX3-204ENST00000366290 TRAV1-1A0A0B4J248 108 aa5.53□□□□□ -1.52
YBX3-204ENST00000366290 ZNF705EA8MWA4 302 aaPredicted RBP5.53□□□□□ -1.52
YBX3-204ENST00000366290 CNN1P51911 297 aaKnown RBP5.53□□□□□ -1.52
YBX3-204ENST00000366290 CCL20P78556 96 aa5.53□□□□□ -1.52
YBX3-204ENST00000366290 LYPD1Q8N2G4 141 aa5.53□□□□□ -1.52
YBX3-204ENST00000366290 OR11H2Q8NH07 326 aa5.53□□□□□ -1.52
YBX3-204ENST00000366290 LRRC20Q8TCA0 184 aa5.53□□□□□ -1.52
YBX3-204ENST00000366290 SFT2D1Q8WV19 159 aa5.53□□□□□ -1.52
YBX3-204ENST00000366290 RARRES2Q99969 163 aa5.53□□□□□ -1.52
YBX3-204ENST00000366290 OTORQ9NRC9 128 aa5.53□□□□□ -1.52
YBX3-204ENST00000366290 CLEC5AQ9NY25 188 aa5.53□□□□□ -1.52
YBX3-204ENST00000366290 PRELID1Q9Y255 219 aa5.53□□□□□ -1.52
YBX3-204ENST00000366290 KMT2AQ03164 3969 aa5.52□□□□□ -1.53
YBX3-204ENST00000366290 IGKV2-40A0A087WW87 121 aaPredicted RBP5.52□□□□□ -1.53
YBX3-204ENST00000366290 A0A1B0GV50 99 aa5.52□□□□□ -1.53
YBX3-204ENST00000366290 A0A1W2PRE2 83 aa5.52□□□□□ -1.53
YBX3-204ENST00000366290 PGPA6NDG6 321 aa5.52□□□□□ -1.53
YBX3-204ENST00000366290 FAM74A7A6NL05 159 aa5.52□□□□□ -1.53
YBX3-204ENST00000366290 IGKV2D-40P01614 121 aaPredicted RBP5.52□□□□□ -1.53
YBX3-204ENST00000366290 NUTF2P61970 127 aaKnown RBP5.52□□□□□ -1.53
YBX3-204ENST00000366290 GNG5P63218 68 aa5.52□□□□□ -1.53
YBX3-204ENST00000366290 HIST1H1AQ02539 215 aaPredicted RBP5.52□□□□□ -1.53
YBX3-204ENST00000366290 TEX261Q6UWH6 196 aa5.52□□□□□ -1.53
YBX3-204ENST00000366290 IQCF2Q8IXL9 164 aa5.52□□□□□ -1.53
YBX3-204ENST00000366290 Q8NAQ8 132 aa5.52□□□□□ -1.53
YBX3-204ENST00000366290 LYPD6BQ8NI32 183 aa5.52□□□□□ -1.53
YBX3-204ENST00000366290 SLC35B3Q9H1N7 401 aa5.52□□□□□ -1.53
YBX3-204ENST00000366290 NDUFAF8A1L188 74 aa5.51□□□□□ -1.53
YBX3-204ENST00000366290 NUPR2A6NF83 97 aa5.51□□□□□ -1.53
YBX3-204ENST00000366290 CRXO43186 299 aaPredicted RBP5.51□□□□□ -1.53
YBX3-204ENST00000366290 CT45A10P0DMU9 189 aa5.51□□□□□ -1.53
YBX3-204ENST00000366290 MIFP14174 115 aa5.51□□□□□ -1.53
YBX3-204ENST00000366290 FXYD7P58549 80 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 101.5 ms