RNA–Protein interactions for RNA: ENST00000344627.10

SGCA-202, Transcript of sarcoglycan alpha, humanhuman

TSL 1 (best) BASIC

Gene SGCA, Length 1,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-202ENST00000344627 TRAV8-1A0A0A6YYK1 113 aa8.53□□□□□ -1.04
SGCA-202ENST00000344627 TRAV21A0A0B4J279 112 aa8.53□□□□□ -1.04
SGCA-202ENST00000344627 GNRH2O43555 120 aa8.53□□□□□ -1.04
SGCA-202ENST00000344627 TMED6Q8WW62 240 aa8.53□□□□□ -1.04
SGCA-202ENST00000344627 ZNF479Q96JC4 524 aa8.53□□□□□ -1.04
SGCA-202ENST00000344627 SGK494Q96LW2 274 aa8.53□□□□□ -1.04
SGCA-202ENST00000344627 NDFIP1Q9BT67 221 aa8.53□□□□□ -1.04
SGCA-202ENST00000344627 KRTAP4-5Q9BYR2 181 aa8.53□□□□□ -1.04
SGCA-202ENST00000344627 DNAH5Q8TE73 4624 aa8.52□□□□□ -1.05
SGCA-202ENST00000344627 A0A1B0GVG6 124 aa8.52□□□□□ -1.05
SGCA-202ENST00000344627 MBP02144 154 aa8.52□□□□□ -1.05
SGCA-202ENST00000344627 ATP6V0CP27449 155 aa8.52□□□□□ -1.05
SGCA-202ENST00000344627 SRIP30626 198 aa8.52□□□□□ -1.05
SGCA-202ENST00000344627 NEGR1Q7Z3B1 354 aa8.52□□□□□ -1.05
SGCA-202ENST00000344627 OR4C5Q8NGB2 326 aa8.52□□□□□ -1.05
SGCA-202ENST00000344627 RAB24Q969Q5 203 aa8.52□□□□□ -1.05
SGCA-202ENST00000344627 SDF2L1Q9HCN8 221 aa8.52□□□□□ -1.05
SGCA-202ENST00000344627 SCRT2Q9NQ03 307 aa8.52□□□□□ -1.05
SGCA-202ENST00000344627 HMSDA8MTL9 139 aa8.51□□□□□ -1.05
SGCA-202ENST00000344627 K7EQM0 130 aa8.51□□□□□ -1.05
SGCA-202ENST00000344627 M0R2P5 195 aa8.51□□□□□ -1.05
SGCA-202ENST00000344627 C1QBP02746 253 aa8.51□□□□□ -1.05
SGCA-202ENST00000344627 GYPEP15421 78 aa8.51□□□□□ -1.05
SGCA-202ENST00000344627 GCHFRP30047 84 aa8.51□□□□□ -1.05
SGCA-202ENST00000344627 LINC00315P59091 139 aa8.51□□□□□ -1.05
SGCA-202ENST00000344627 ZFP69Q49AA0 526 aa8.51□□□□□ -1.05
SGCA-202ENST00000344627 LYPD5Q6UWN5 251 aa8.51□□□□□ -1.05
SGCA-202ENST00000344627 RASL10AQ92737 203 aa8.51□□□□□ -1.05
SGCA-202ENST00000344627 TVP23CQ96ET8 276 aa8.51□□□□□ -1.05
SGCA-202ENST00000344627 AQP10Q96PS8 301 aa8.51□□□□□ -1.05
SGCA-202ENST00000344627 APOBP04114 4563 aaKnown RBP8.51□□□□□ -1.05
SGCA-202ENST00000344627 FXYD6-FXYD2A0A087WZ82 144 aa8.5□□□□□ -1.05
SGCA-202ENST00000344627 TRAV4A0A0B4J268 109 aa8.5□□□□□ -1.05
SGCA-202ENST00000344627 IGHV3-16A0A0C4DH30 117 aa8.5□□□□□ -1.05
SGCA-202ENST00000344627 TYMSP04818 313 aa8.5□□□□□ -1.05
SGCA-202ENST00000344627 STAG3L2P0CL84 134 aa8.5□□□□□ -1.05
SGCA-202ENST00000344627 STAG3L3P0CL85 134 aa8.5□□□□□ -1.05
SGCA-202ENST00000344627 ERVFC1-1P60608 527 aa8.5□□□□□ -1.05
SGCA-202ENST00000344627 SUMO1P63165 101 aaKnown RBP8.5□□□□□ -1.05
SGCA-202ENST00000344627 Q5BKY6 102 aa8.5□□□□□ -1.05
SGCA-202ENST00000344627 ARL6IP6Q8N6S5 226 aa8.5□□□□□ -1.05
SGCA-202ENST00000344627 OR2G3Q8NGZ4 309 aa8.5□□□□□ -1.05
SGCA-202ENST00000344627 KCNS1Q96KK3 526 aa8.5□□□□□ -1.05
SGCA-202ENST00000344627 PSMG3Q9BT73 122 aaPredicted RBP8.5□□□□□ -1.05
SGCA-202ENST00000344627 ACTR3CQ9C0K3 210 aaPredicted RBP8.5□□□□□ -1.05
SGCA-202ENST00000344627 SH3BGRL3Q9H299 93 aa8.5□□□□□ -1.05
SGCA-202ENST00000344627 BORCS7-ASMTA0A0B4J1R7 106 aa8.49□□□□□ -1.05
SGCA-202ENST00000344627 A0A0D9SG52 128 aa8.49□□□□□ -1.05
SGCA-202ENST00000344627 SERTM2A0A1B0GWG4 89 aa8.49□□□□□ -1.05
SGCA-202ENST00000344627 C9JCJ5 164 aa8.49□□□□□ -1.05
SGCA-202ENST00000344627 K7EQD1 137 aa8.49□□□□□ -1.05
SGCA-202ENST00000344627 CXorf1O96002 111 aa8.49□□□□□ -1.05
SGCA-202ENST00000344627 ORM1P02763 201 aa8.49□□□□□ -1.05
SGCA-202ENST00000344627 SERF2P84101 59 aa8.49□□□□□ -1.05
SGCA-202ENST00000344627 ZNF345Q14585 488 aa8.49□□□□□ -1.05
SGCA-202ENST00000344627 TDRG1Q3Y452 100 aa8.49□□□□□ -1.05
SGCA-202ENST00000344627 PRNTQ86SH4 94 aa8.49□□□□□ -1.05
SGCA-202ENST00000344627 C5orf17Q8NAS9 161 aa8.49□□□□□ -1.05
SGCA-202ENST00000344627 TXNDC17Q9BRA2 123 aa8.49□□□□□ -1.05
SGCA-202ENST00000344627 TMEM167BQ9NRX6 74 aa8.49□□□□□ -1.05
SGCA-202ENST00000344627 PSG8Q9UQ74 426 aa8.49□□□□□ -1.05
SGCA-202ENST00000344627 TAAR5O14804 337 aa8.48□□□□□ -1.05
SGCA-202ENST00000344627 TCRAP04437 139 aa8.48□□□□□ -1.05
SGCA-202ENST00000344627 RPL7L1Q6DKI1 246 aaKnown RBP8.48□□□□□ -1.05
SGCA-202ENST00000344627 NHLRC2Q8NBF2 726 aa8.48□□□□□ -1.05
SGCA-202ENST00000344627 EPDR1Q9UM22 224 aa8.48□□□□□ -1.05
SGCA-202ENST00000344627 TNFSF18Q9UNG2 199 aa8.48□□□□□ -1.05
SGCA-202ENST00000344627 TNFRSF18Q9Y5U5 241 aa8.48□□□□□ -1.05
SGCA-202ENST00000344627 EPM2AB3EWF7 344 aa8.47□□□□□ -1.05
SGCA-202ENST00000344627 ARPC5O15511 151 aa8.47□□□□□ -1.05
SGCA-202ENST00000344627 GCGP01275 180 aa8.47□□□□□ -1.05
SGCA-202ENST00000344627 IFNA7P01567 189 aa8.47□□□□□ -1.05
SGCA-202ENST00000344627 EVI2AP22794 236 aa8.47□□□□□ -1.05
SGCA-202ENST00000344627 EIF5AP63241 154 aaKnown RBP8.47□□□□□ -1.05
SGCA-202ENST00000344627 ZNF876PQ49A33 203 aa8.47□□□□□ -1.05
SGCA-202ENST00000344627 SMUG1Q53HV7 270 aa8.47□□□□□ -1.05
SGCA-202ENST00000344627 Q6ZRN7 208 aaPredicted RBP8.47□□□□□ -1.05
SGCA-202ENST00000344627 LY96Q9Y6Y9 160 aa8.47□□□□□ -1.05
SGCA-202ENST00000344627 IGHV3-73A0A0B4J1V6 119 aa8.46□□□□□ -1.06
SGCA-202ENST00000344627 LOC100131303A0A0U1RQF7 123 aa8.46□□□□□ -1.06
SGCA-202ENST00000344627 GGTLC3B5MD39 225 aa8.46□□□□□ -1.06
SGCA-202ENST00000344627 PPT1P50897 306 aa8.46□□□□□ -1.06
SGCA-202ENST00000344627 ZNF80P51504 273 aaPredicted RBP8.46□□□□□ -1.06
SGCA-202ENST00000344627 KRTAP10-2P60368 255 aa8.46□□□□□ -1.06
SGCA-202ENST00000344627 UBE2G2P60604 165 aa8.46□□□□□ -1.06
SGCA-202ENST00000344627 FLI1Q01543 452 aaPredicted RBP8.46□□□□□ -1.06
SGCA-202ENST00000344627 SH2D6Q7Z4S9 175 aa8.46□□□□□ -1.06
SGCA-202ENST00000344627 CYB561D1Q8N8Q1 229 aa8.46□□□□□ -1.06
SGCA-202ENST00000344627 SUN5Q8TC36 379 aa8.46□□□□□ -1.06
SGCA-202ENST00000344627 TRAV34A0A0B4J273 112 aa8.45□□□□□ -1.06
SGCA-202ENST00000344627 KANTRA0A1W2PQU2 76 aa8.45□□□□□ -1.06
SGCA-202ENST00000344627 FBLL1A6NHQ2 334 aaKnown RBP8.45□□□□□ -1.06
SGCA-202ENST00000344627 G3V3Q6 166 aa8.45□□□□□ -1.06
SGCA-202ENST00000344627 AKR1C8PQ5T2L2 129 aa8.45□□□□□ -1.06
SGCA-202ENST00000344627 WFDC10BQ8IUB3 73 aa8.45□□□□□ -1.06
SGCA-202ENST00000344627 C10orf126Q8N4M7 172 aa8.45□□□□□ -1.06
SGCA-202ENST00000344627 TMEM75Q8N9X5 138 aa8.45□□□□□ -1.06
SGCA-202ENST00000344627 C11orf21Q9P2W6 132 aa8.45□□□□□ -1.06
SGCA-202ENST00000344627 RNF222A6NCQ9 220 aa8.44□□□□□ -1.06
SGCA-202ENST00000344627 SMLR1H3BR10 107 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 87.7 ms