RNA–Protein interactions for RNA: ENST00000344113.8

SYNE2-202, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE2, Length 21,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-202ENST00000344113 PRR15Q8IV56 129 aa2.98□□□□□ -1.93
SYNE2-202ENST00000344113 DPH3Q96FX2 82 aa2.98□□□□□ -1.93
SYNE2-202ENST00000344113 MRPL36Q9P0J6 103 aaKnown RBP2.98□□□□□ -1.93
SYNE2-202ENST00000344113 ARFGEF1Q9Y6D6 1849 aa2.97□□□□□ -1.93
SYNE2-202ENST00000344113 I3L3M4 83 aa2.97□□□□□ -1.93
SYNE2-202ENST00000344113 TPSG1Q9NRR2 321 aa2.97□□□□□ -1.93
SYNE2-202ENST00000344113 K7EM74 188 aa2.97□□□□□ -1.93
SYNE2-202ENST00000344113 EBI3Q14213 229 aa2.97□□□□□ -1.93
SYNE2-202ENST00000344113 ANKRD36A6QL64 1941 aa2.97□□□□□ -1.93
SYNE2-202ENST00000344113 IGHV1-45A0A0A0MS14 117 aa2.97□□□□□ -1.93
SYNE2-202ENST00000344113 BADQ92934 168 aa2.97□□□□□ -1.93
SYNE2-202ENST00000344113 CYP4F30PQ9H0H9 118 aa2.97□□□□□ -1.93
SYNE2-202ENST00000344113 PIEZO1Q92508 2521 aa2.97□□□□□ -1.93
SYNE2-202ENST00000344113 IGLV3-32A0A0A0MS00 114 aa2.97□□□□□ -1.93
SYNE2-202ENST00000344113 A0A1W2PRX2 142 aa2.97□□□□□ -1.93
SYNE2-202ENST00000344113 HOXB4P17483 251 aaPredicted RBP2.97□□□□□ -1.93
SYNE2-202ENST00000344113 IGLV3-21P80748 117 aaPredicted RBP2.97□□□□□ -1.93
SYNE2-202ENST00000344113 CLEC2BQ92478 149 aa2.97□□□□□ -1.93
SYNE2-202ENST00000344113 A0A0G2JMZ2 1700 aa2.97□□□□□ -1.93
SYNE2-202ENST00000344113 LRRC37A2A6NM11 1700 aa2.97□□□□□ -1.93
SYNE2-202ENST00000344113 LRRC37AA6NMS7 1700 aa2.97□□□□□ -1.93
SYNE2-202ENST00000344113 MED14OSP0DP75 135 aa2.97□□□□□ -1.93
SYNE2-202ENST00000344113 SIT1Q9Y3P8 196 aa2.97□□□□□ -1.93
SYNE2-202ENST00000344113 PRM2P04554 102 aa2.97□□□□□ -1.93
SYNE2-202ENST00000344113 DEFB108AA8MXU0 73 aa2.97□□□□□ -1.93
SYNE2-202ENST00000344113 C4orf48Q5BLP8 95 aa2.97□□□□□ -1.93
SYNE2-202ENST00000344113 AJUBAQ96IF1 538 aa2.97□□□□□ -1.93
SYNE2-202ENST00000344113 GAFA1Q96PS6 74 aa2.97□□□□□ -1.93
SYNE2-202ENST00000344113 TOMM7Q9P0U1 55 aa2.97□□□□□ -1.93
SYNE2-202ENST00000344113 GATA4P43694 442 aa2.97□□□□□ -1.93
SYNE2-202ENST00000344113 SDIM1Q6ZPB5 146 aa2.97□□□□□ -1.93
SYNE2-202ENST00000344113 KLK9Q9UKQ9 250 aa2.97□□□□□ -1.93
SYNE2-202ENST00000344113 C8orf87E5RJ46 101 aa2.97□□□□□ -1.93
SYNE2-202ENST00000344113 CELA1Q9UNI1 258 aa2.97□□□□□ -1.93
SYNE2-202ENST00000344113 SPRY4Q9C004 299 aa2.97□□□□□ -1.93
SYNE2-202ENST00000344113 ZNF80P51504 273 aaPredicted RBP2.97□□□□□ -1.93
SYNE2-202ENST00000344113 EXPH5Q8NEV8 1989 aa2.97□□□□□ -1.93
SYNE2-202ENST00000344113 DMBT1Q9UGM3 2413 aaPredicted RBP2.96□□□□□ -1.93
SYNE2-202ENST00000344113 WISP2O76076 250 aa2.96□□□□□ -1.93
SYNE2-202ENST00000344113 LYPD3O95274 346 aa2.96□□□□□ -1.93
SYNE2-202ENST00000344113 CHCHD2P9Q5T1J5 151 aaPredicted RBP2.96□□□□□ -1.93
SYNE2-202ENST00000344113 TRIP6Q15654 476 aaKnown RBP2.96□□□□□ -1.93
SYNE2-202ENST00000344113 DEFB127Q9H1M4 99 aa2.96□□□□□ -1.93
SYNE2-202ENST00000344113 FNDC1Q4ZHG4 1894 aaPredicted RBP2.96□□□□□ -1.93
SYNE2-202ENST00000344113 SCN10AQ9Y5Y9 1956 aa2.96□□□□□ -1.93
SYNE2-202ENST00000344113 FXYD2P54710 66 aa2.96□□□□□ -1.94
SYNE2-202ENST00000344113 KLKP1Q107X0 134 aa2.96□□□□□ -1.94
SYNE2-202ENST00000344113 C15orf32Q32M92 178 aa2.96□□□□□ -1.94
SYNE2-202ENST00000344113 C9orf139Q6ZV77 190 aa2.96□□□□□ -1.94
SYNE2-202ENST00000344113 DSCAMO60469 2012 aa2.96□□□□□ -1.94
SYNE2-202ENST00000344113 ABCA3Q99758 1704 aa2.96□□□□□ -1.94
SYNE2-202ENST00000344113 WFDC3Q8IUB2 231 aa2.96□□□□□ -1.94
SYNE2-202ENST00000344113 FAM223BA6NKX1 122 aa2.96□□□□□ -1.94
SYNE2-202ENST00000344113 FAM223AQ8IWN6 122 aa2.96□□□□□ -1.94
SYNE2-202ENST00000344113 FGF22Q9HCT0 170 aa2.96□□□□□ -1.94
SYNE2-202ENST00000344113 TANC1Q9C0D5 1861 aa2.96□□□□□ -1.94
SYNE2-202ENST00000344113 C14orf132Q9NPU4 83 aa2.96□□□□□ -1.94
SYNE2-202ENST00000344113 PKD1L2Q7Z442 2459 aa2.96□□□□□ -1.94
SYNE2-202ENST00000344113 NHLRC4P0CG21 123 aaPredicted RBP2.96□□□□□ -1.94
SYNE2-202ENST00000344113 ZNF576Q9H609 170 aa2.96□□□□□ -1.94
SYNE2-202ENST00000344113 CXCL13O43927 109 aa2.96□□□□□ -1.94
SYNE2-202ENST00000344113 GYPEP15421 78 aa2.96□□□□□ -1.94
SYNE2-202ENST00000344113 MIAQ16674 131 aa2.96□□□□□ -1.94
SYNE2-202ENST00000344113 LOC101059948A0A1B0GTJ6 334 aa2.96□□□□□ -1.94
SYNE2-202ENST00000344113 NOTCH2Q04721 2471 aa2.96□□□□□ -1.94
SYNE2-202ENST00000344113 VEGFBP49765 207 aa2.96□□□□□ -1.94
SYNE2-202ENST00000344113 ZCCHC24Q8N2G6 241 aaKnown RBP2.96□□□□□ -1.94
SYNE2-202ENST00000344113 LMO7DNF2Z398 122 aa2.96□□□□□ -1.94
SYNE2-202ENST00000344113 WISP1O95388 367 aa2.96□□□□□ -1.94
SYNE2-202ENST00000344113 CISD3P0C7P0 127 aa2.96□□□□□ -1.94
SYNE2-202ENST00000344113 RNASE4P34096 147 aaKnown RBP2.96□□□□□ -1.94
SYNE2-202ENST00000344113 RPS27P42677 84 aaKnown RBP2.96□□□□□ -1.94
SYNE2-202ENST00000344113 FOXL2NBQ6ZUU3 175 aa2.96□□□□□ -1.94
SYNE2-202ENST00000344113 SMKR1H3BMG3 65 aa2.96□□□□□ -1.94
SYNE2-202ENST00000344113 SPRY2O43597 315 aa2.96□□□□□ -1.94
SYNE2-202ENST00000344113 EDN2P20800 178 aa2.96□□□□□ -1.94
SYNE2-202ENST00000344113 LHFPL6Q9Y693 200 aa2.96□□□□□ -1.94
SYNE2-202ENST00000344113 FER1L4A9Z1Z3 1794 aa2.95□□□□□ -1.94
SYNE2-202ENST00000344113 SRRM4A7MD48 611 aaKnown RBP2.95□□□□□ -1.94
SYNE2-202ENST00000344113 PRR20EP86478 221 aa2.95□□□□□ -1.94
SYNE2-202ENST00000344113 PRR20CP86479 221 aa2.95□□□□□ -1.94
SYNE2-202ENST00000344113 PRR20DP86480 221 aa2.95□□□□□ -1.94
SYNE2-202ENST00000344113 PRR20BP86481 221 aa2.95□□□□□ -1.94
SYNE2-202ENST00000344113 PRR20AP86496 221 aa2.95□□□□□ -1.94
SYNE2-202ENST00000344113 LINC00310P59036 64 aa2.95□□□□□ -1.94
SYNE2-202ENST00000344113 FHL5Q5TD97 284 aa2.95□□□□□ -1.94
SYNE2-202ENST00000344113 hDV103S1A0JD37 113 aa2.95□□□□□ -1.94
SYNE2-202ENST00000344113 KTN1-AS1Q86SY8 53 aa2.95□□□□□ -1.94
SYNE2-202ENST00000344113 TMEM223A0PJW6 202 aa2.95□□□□□ -1.94
SYNE2-202ENST00000344113 Q6ZT83 130 aa2.95□□□□□ -1.94
SYNE2-202ENST00000344113 NOTCH4Q99466 2003 aa2.95□□□□□ -1.94
SYNE2-202ENST00000344113 IGKV3D-7A0A0C4DH55 119 aa2.95□□□□□ -1.94
SYNE2-202ENST00000344113 H3BPC8 53 aa2.95□□□□□ -1.94
SYNE2-202ENST00000344113 RNF144BQ7Z419 303 aa2.95□□□□□ -1.94
SYNE2-202ENST00000344113 COX14Q96I36 57 aa2.95□□□□□ -1.94
SYNE2-202ENST00000344113 A0A096LPE4 126 aa2.95□□□□□ -1.94
SYNE2-202ENST00000344113 A0A1W2PPZ6 126 aa2.95□□□□□ -1.94
SYNE2-202ENST00000344113 A0A1W2PNR3 127 aa2.95□□□□□ -1.94
SYNE2-202ENST00000344113 ZNF726P1Q15940 193 aa2.95□□□□□ -1.94
SYNE2-202ENST00000344113 DEFB110Q30KQ9 67 aa2.95□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms