RNA–Protein interactions for RNA: ENST00000343958.8

FGD6-201, Transcript of FYVE, RhoGEF and PH domain containing 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FGD6, Length 9,288 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGD6-201ENST00000343958 TMEM243Q9BU79 118 aa6.69□□□□□ -1.34
FGD6-201ENST00000343958 LAMTOR3Q9UHA4 124 aa6.69□□□□□ -1.34
FGD6-201ENST00000343958 C19orf71A6NCJ1 209 aa6.69□□□□□ -1.34
FGD6-201ENST00000343958 F5H768 121 aa6.69□□□□□ -1.34
FGD6-201ENST00000343958 INS-IGF2F8WCM5 200 aa6.69□□□□□ -1.34
FGD6-201ENST00000343958 TAL2Q16559 108 aa6.69□□□□□ -1.34
FGD6-201ENST00000343958 C19orf84I3L1E1 186 aa6.69□□□□□ -1.34
FGD6-201ENST00000343958 LINC01545Q5VT33 79 aa6.69□□□□□ -1.34
FGD6-201ENST00000343958 MYO9BQ13459 2157 aa6.69□□□□□ -1.34
FGD6-201ENST00000343958 ABCA7Q8IZY2 2146 aa6.68□□□□□ -1.34
FGD6-201ENST00000343958 NOP10Q9NPE3 64 aaKnown RBP6.68□□□□□ -1.34
FGD6-201ENST00000343958 DEFB125Q8N687 156 aa6.68□□□□□ -1.34
FGD6-201ENST00000343958 PTPRDP23468 1912 aa6.68□□□□□ -1.34
FGD6-201ENST00000343958 A0A0J9YY99 117 aa6.68□□□□□ -1.34
FGD6-201ENST00000343958 VPREB3Q9UKI3 123 aa6.68□□□□□ -1.34
FGD6-201ENST00000343958 UNQ9165/PRO28630Q6UXU0 137 aa6.68□□□□□ -1.34
FGD6-201ENST00000343958 ZFP2Q6ZN57 461 aa6.68□□□□□ -1.34
FGD6-201ENST00000343958 KNL1Q8NG31 2342 aa6.68□□□□□ -1.34
FGD6-201ENST00000343958 PRO3102Q9H379 93 aa6.68□□□□□ -1.34
FGD6-201ENST00000343958 DAD1P61803 113 aa6.68□□□□□ -1.34
FGD6-201ENST00000343958 TP73-AS1Q9UF72 201 aa6.68□□□□□ -1.34
FGD6-201ENST00000343958 H3BMM0 161 aa6.68□□□□□ -1.34
FGD6-201ENST00000343958 UBE2WQ96B02 151 aa6.68□□□□□ -1.34
FGD6-201ENST00000343958 A0A0J9YXV3 536 aa6.67□□□□□ -1.34
FGD6-201ENST00000343958 IGLL5B9A064 214 aa6.67□□□□□ -1.34
FGD6-201ENST00000343958 RPL39P62891 51 aaKnown RBP6.67□□□□□ -1.34
FGD6-201ENST00000343958 ZNF493Q6ZR52 646 aa6.67□□□□□ -1.34
FGD6-201ENST00000343958 MGAMO43451 1857 aa6.67□□□□□ -1.34
FGD6-201ENST00000343958 PRO1854Q9UHT4 67 aa6.67□□□□□ -1.34
FGD6-201ENST00000343958 RNF114Q9Y508 228 aa6.67□□□□□ -1.34
FGD6-201ENST00000343958 TAX1BP3O14907 124 aa6.66□□□□□ -1.34
FGD6-201ENST00000343958 NTN5Q8WTR8 489 aaPredicted RBP6.66□□□□□ -1.34
FGD6-201ENST00000343958 SCN2AQ99250 2005 aa6.66□□□□□ -1.34
FGD6-201ENST00000343958 TDRD6O60522 2096 aaKnown RBP6.66□□□□□ -1.34
FGD6-201ENST00000343958 C10orf142B7Z368 130 aa6.66□□□□□ -1.34
FGD6-201ENST00000343958 UBE2DNLQ8IWF7 75 aa6.66□□□□□ -1.34
FGD6-201ENST00000343958 YPEL4Q96NS1 127 aa6.66□□□□□ -1.34
FGD6-201ENST00000343958 FXYD2P54710 66 aa6.66□□□□□ -1.34
FGD6-201ENST00000343958 Q6ZQT7 251 aa6.66□□□□□ -1.34
FGD6-201ENST00000343958 SH2D6Q7Z4S9 175 aa6.66□□□□□ -1.34
FGD6-201ENST00000343958 CCDC140Q96MF4 163 aa6.66□□□□□ -1.34
FGD6-201ENST00000343958 DAZAP2Q15038 168 aaPredicted RBP6.65□□□□□ -1.34
FGD6-201ENST00000343958 F8W1H4 67 aa6.65□□□□□ -1.34
FGD6-201ENST00000343958 DEFB113Q30KQ7 82 aa6.65□□□□□ -1.34
FGD6-201ENST00000343958 TP53TG3Q9ULZ0 132 aa6.65□□□□□ -1.34
FGD6-201ENST00000343958 Q8N1Y9 231 aa6.65□□□□□ -1.34
FGD6-201ENST00000343958 CARD19Q96LW7 228 aa6.65□□□□□ -1.34
FGD6-201ENST00000343958 C9orf47Q6ZRZ4 202 aa6.65□□□□□ -1.34
FGD6-201ENST00000343958 A6NDX4 124 aa6.65□□□□□ -1.35
FGD6-201ENST00000343958 MUSTN1Q8IVN3 82 aa6.65□□□□□ -1.35
FGD6-201ENST00000343958 ODF3BA8MYP8 253 aa6.65□□□□□ -1.35
FGD6-201ENST00000343958 PPDPFLQ8WWR9 84 aa6.65□□□□□ -1.35
FGD6-201ENST00000343958 ZNF48Q96MX3 618 aaPredicted RBP6.65□□□□□ -1.35
FGD6-201ENST00000343958 J3QKU1 62 aa6.65□□□□□ -1.35
FGD6-201ENST00000343958 OPRPNQ99935 248 aaPredicted RBP6.65□□□□□ -1.35
FGD6-201ENST00000343958 CFC1BP0CG36 223 aa6.64□□□□□ -1.35
FGD6-201ENST00000343958 CFC1P0CG37 223 aa6.64□□□□□ -1.35
FGD6-201ENST00000343958 LENEPQ9Y5L5 61 aa6.64□□□□□ -1.35
FGD6-201ENST00000343958 TRBV6-1A0A0K0K1D8 114 aa6.64□□□□□ -1.35
FGD6-201ENST00000343958 HIST2H2BDQ6DRA6 164 aa6.64□□□□□ -1.35
FGD6-201ENST00000343958 A0A1B0GXF2 115 aa6.64□□□□□ -1.35
FGD6-201ENST00000343958 CCL24O00175 119 aa6.64□□□□□ -1.35
FGD6-201ENST00000343958 C2orf70A6NJV1 201 aa6.64□□□□□ -1.35
FGD6-201ENST00000343958 IGF1P05019 195 aa6.64□□□□□ -1.35
FGD6-201ENST00000343958 CRYGBP07316 175 aa6.64□□□□□ -1.35
FGD6-201ENST00000343958 HERVK_113P63121 156 aa6.63□□□□□ -1.35
FGD6-201ENST00000343958 BAALCQ8WXS3 180 aa6.63□□□□□ -1.35
FGD6-201ENST00000343958 Q9H8V8 135 aa6.63□□□□□ -1.35
FGD6-201ENST00000343958 RHOHQ15669 191 aa6.63□□□□□ -1.35
FGD6-201ENST00000343958 LINC00574Q9H8X3 128 aa6.63□□□□□ -1.35
FGD6-201ENST00000343958 ESM1Q9NQ30 184 aa6.63□□□□□ -1.35
FGD6-201ENST00000343958 RNASE8Q8TDE3 154 aaKnown RBP6.63□□□□□ -1.35
FGD6-201ENST00000343958 EDA2RQ9HAV5 297 aa6.63□□□□□ -1.35
FGD6-201ENST00000343958 MBD6Q96DN6 1003 aa6.63□□□□□ -1.35
FGD6-201ENST00000343958 TRBV20-1A0A075B6N2 111 aa6.63□□□□□ -1.35
FGD6-201ENST00000343958 GAGE12HA6NDE8 117 aa6.63□□□□□ -1.35
FGD6-201ENST00000343958 CTRLP40313 264 aa6.63□□□□□ -1.35
FGD6-201ENST00000343958 C5orf38Q86SI9 138 aa6.62□□□□□ -1.35
FGD6-201ENST00000343958 TOMM6Q96B49 74 aa6.62□□□□□ -1.35
FGD6-201ENST00000343958 XCL1P47992 114 aa6.62□□□□□ -1.35
FGD6-201ENST00000343958 LMO4P61968 165 aa6.62□□□□□ -1.35
FGD6-201ENST00000343958 RS1O15537 224 aa6.62□□□□□ -1.35
FGD6-201ENST00000343958 C20orf173Q96LM9 149 aa6.62□□□□□ -1.35
FGD6-201ENST00000343958 SPAG8Q99932 426 aaPredicted RBP6.62□□□□□ -1.35
FGD6-201ENST00000343958 MDFICQ9P1T7 246 aa6.62□□□□□ -1.35
FGD6-201ENST00000343958 SMAD5-AS1Q9Y6J3 95 aa6.62□□□□□ -1.35
FGD6-201ENST00000343958 ARID1AO14497 2285 aa6.62□□□□□ -1.35
FGD6-201ENST00000343958 UNC13CQ8NB66 2214 aa6.62□□□□□ -1.35
FGD6-201ENST00000343958 CEMP1Q6PRD7 247 aaPredicted RBP6.62□□□□□ -1.35
FGD6-201ENST00000343958 DAND5Q8N907 189 aa6.62□□□□□ -1.35
FGD6-201ENST00000343958 TINCRA0A1B0GVN0 87 aa6.61□□□□□ -1.35
FGD6-201ENST00000343958 C3orf56Q8N813 242 aa6.61□□□□□ -1.35
FGD6-201ENST00000343958 IGHG2P01859 326 aa6.61□□□□□ -1.35
FGD6-201ENST00000343958 ANGP03950 147 aaKnown RBP6.61□□□□□ -1.35
FGD6-201ENST00000343958 MLST8Q9BVC4 326 aa6.61□□□□□ -1.35
FGD6-201ENST00000343958 CRIP1P50238 77 aa6.61□□□□□ -1.35
FGD6-201ENST00000343958 CACNA1IQ9P0X4 2223 aa6.61□□□□□ -1.35
FGD6-201ENST00000343958 OVOL2Q9BRP0 275 aa6.61□□□□□ -1.35
FGD6-201ENST00000343958 ZNF561-AS1K7EIQ3 104 aa6.61□□□□□ -1.35
FGD6-201ENST00000343958 TEX48A0A1B0GUV7 120 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms