RNA–Protein interactions for RNA: ENST00000340647.8

BRCC3-202, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

APPRIS P2 TSL 2 BASIC

Gene BRCC3, Length 1,101 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-202ENST00000340647 CYTL1Q9NRR1 136 aa11.65□□□□□ -0.54
BRCC3-202ENST00000340647 NAGKQ9UJ70 344 aa11.65□□□□□ -0.54
BRCC3-202ENST00000340647 TRGV11A0A075B6L2 103 aa11.64□□□□□ -0.55
BRCC3-202ENST00000340647 TRAV21A0A0B4J279 112 aa11.64□□□□□ -0.55
BRCC3-202ENST00000340647 A0A1W2PPQ1 181 aa11.64□□□□□ -0.55
BRCC3-202ENST00000340647 SUMO1P63165 101 aaKnown RBP11.64□□□□□ -0.55
BRCC3-202ENST00000340647 FAM74A1Q5RGS3 127 aa11.64□□□□□ -0.55
BRCC3-202ENST00000340647 C5orf17Q8NAS9 161 aa11.64□□□□□ -0.55
BRCC3-202ENST00000340647 OR2T35Q8NGX2 323 aa11.64□□□□□ -0.55
BRCC3-202ENST00000340647 ASB13Q8WXK3 278 aa11.64□□□□□ -0.55
BRCC3-202ENST00000340647 ICOSQ9Y6W8 199 aa11.64□□□□□ -0.55
BRCC3-202ENST00000340647 FXYD6-FXYD2A0A087WZ82 144 aa11.63□□□□□ -0.55
BRCC3-202ENST00000340647 K7EQD1 137 aa11.63□□□□□ -0.55
BRCC3-202ENST00000340647 TMEM75Q8N9X5 138 aa11.63□□□□□ -0.55
BRCC3-202ENST00000340647 LINC00479Q96M42 142 aa11.63□□□□□ -0.55
BRCC3-202ENST00000340647 EPDR1Q9UM22 224 aa11.63□□□□□ -0.55
BRCC3-202ENST00000340647 PSG8Q9UQ74 426 aa11.63□□□□□ -0.55
BRCC3-202ENST00000340647 TNFRSF18Q9Y5U5 241 aa11.63□□□□□ -0.55
BRCC3-202ENST00000340647 NXPH4O95158 308 aa11.62□□□□□ -0.55
BRCC3-202ENST00000340647 MBP02144 154 aa11.62□□□□□ -0.55
BRCC3-202ENST00000340647 KRTAP10-2P60368 255 aa11.62□□□□□ -0.55
BRCC3-202ENST00000340647 DPPA3Q6W0C5 159 aa11.62□□□□□ -0.55
BRCC3-202ENST00000340647 ACTR3CQ9C0K3 210 aaPredicted RBP11.62□□□□□ -0.55
BRCC3-202ENST00000340647 TRAV4A0A0B4J268 109 aa11.61□□□□□ -0.55
BRCC3-202ENST00000340647 LOC100131303A0A0U1RQF7 123 aa11.61□□□□□ -0.55
BRCC3-202ENST00000340647 M0R2P5 195 aa11.61□□□□□ -0.55
BRCC3-202ENST00000340647 SIVA1O15304 175 aa11.61□□□□□ -0.55
BRCC3-202ENST00000340647 CXorf1O96002 111 aa11.61□□□□□ -0.55
BRCC3-202ENST00000340647 LINC00315P59091 139 aa11.61□□□□□ -0.55
BRCC3-202ENST00000340647 SLAQ13239 276 aa11.61□□□□□ -0.55
BRCC3-202ENST00000340647 TTC32Q5I0X7 151 aa11.61□□□□□ -0.55
BRCC3-202ENST00000340647 INO80EQ8NBZ0 244 aaPredicted RBP11.61□□□□□ -0.55
BRCC3-202ENST00000340647 TRGV4A0A0C4DH28 118 aa11.6□□□□□ -0.55
BRCC3-202ENST00000340647 SERTM2A0A1B0GWG4 89 aa11.6□□□□□ -0.55
BRCC3-202ENST00000340647 SMLR1H3BR10 107 aa11.6□□□□□ -0.55
BRCC3-202ENST00000340647 FLI1Q01543 452 aaPredicted RBP11.6□□□□□ -0.55
BRCC3-202ENST00000340647 MRPL23Q16540 153 aaKnown RBP11.6□□□□□ -0.55
BRCC3-202ENST00000340647 TMEM167BQ9NRX6 74 aa11.6□□□□□ -0.55
BRCC3-202ENST00000340647 TRAV34A0A0B4J273 112 aa11.59□□□□□ -0.55
BRCC3-202ENST00000340647 A0A1W2PRE2 83 aa11.59□□□□□ -0.55
BRCC3-202ENST00000340647 GCGP01275 180 aa11.59□□□□□ -0.55
BRCC3-202ENST00000340647 RNASE3P12724 160 aaKnown RBP11.59□□□□□ -0.55
BRCC3-202ENST00000340647 GYPEP15421 78 aa11.59□□□□□ -0.55
BRCC3-202ENST00000340647 RGS21Q2M5E4 152 aa11.59□□□□□ -0.55
BRCC3-202ENST00000340647 NEGR1Q7Z3B1 354 aa11.59□□□□□ -0.55
BRCC3-202ENST00000340647 PRNTQ86SH4 94 aa11.59□□□□□ -0.55
BRCC3-202ENST00000340647 C9orf85Q96MD7 179 aa11.59□□□□□ -0.55
BRCC3-202ENST00000340647 SDF2L1Q9HCN8 221 aa11.59□□□□□ -0.55
BRCC3-202ENST00000340647 CTXND1A0A1B0GTU2 59 aa11.58□□□□□ -0.56
BRCC3-202ENST00000340647 C16orf90A8MZG2 172 aa11.58□□□□□ -0.56
BRCC3-202ENST00000340647 GATA1P15976 413 aaPredicted RBP11.58□□□□□ -0.56
BRCC3-202ENST00000340647 BTF3P20290 206 aaKnown RBP11.58□□□□□ -0.56
BRCC3-202ENST00000340647 FGF8P55075 233 aaPredicted RBP11.58□□□□□ -0.56
BRCC3-202ENST00000340647 SPATA12Q7Z6I5 190 aa11.58□□□□□ -0.56
BRCC3-202ENST00000340647 WFDC10BQ8IUB3 73 aa11.58□□□□□ -0.56
BRCC3-202ENST00000340647 CYB561D1Q8N8Q1 229 aa11.58□□□□□ -0.56
BRCC3-202ENST00000340647 IGKV3D-20A0A0C4DH25 116 aa11.57□□□□□ -0.56
BRCC3-202ENST00000340647 FAM74A7A6NL05 159 aa11.57□□□□□ -0.56
BRCC3-202ENST00000340647 ARPC5O15511 151 aa11.57□□□□□ -0.56
BRCC3-202ENST00000340647 PFN1P07737 140 aaKnown RBP11.57□□□□□ -0.56
BRCC3-202ENST00000340647 CRIP1P50238 77 aa11.57□□□□□ -0.56
BRCC3-202ENST00000340647 OR4C5Q8NGB2 326 aa11.57□□□□□ -0.56
BRCC3-202ENST00000340647 OR11H4Q8NGC9 324 aa11.57□□□□□ -0.56
BRCC3-202ENST00000340647 KCNS1Q96KK3 526 aa11.57□□□□□ -0.56
BRCC3-202ENST00000340647 BORCS7-ASMTA0A0B4J1R7 106 aa11.56□□□□□ -0.56
BRCC3-202ENST00000340647 PGPEP1LA6NFU8 196 aa11.56□□□□□ -0.56
BRCC3-202ENST00000340647 RS1O15537 224 aa11.56□□□□□ -0.56
BRCC3-202ENST00000340647 UBE2G2P60604 165 aa11.56□□□□□ -0.56
BRCC3-202ENST00000340647 CFAP126Q5VTH2 177 aa11.56□□□□□ -0.56
BRCC3-202ENST00000340647 TAAR5O14804 337 aa11.55□□□□□ -0.56
BRCC3-202ENST00000340647 FHITP49789 147 aa11.55□□□□□ -0.56
BRCC3-202ENST00000340647 SMUG1Q53HV7 270 aa11.55□□□□□ -0.56
BRCC3-202ENST00000340647 NDFIP1Q9BT67 221 aa11.55□□□□□ -0.56
BRCC3-202ENST00000340647 ARL2-SNX15V9GYD0 113 aa11.55□□□□□ -0.56
BRCC3-202ENST00000340647 C9JCJ5 164 aa11.54□□□□□ -0.56
BRCC3-202ENST00000340647 SRIP30626 198 aa11.54□□□□□ -0.56
BRCC3-202ENST00000340647 FUSP35637 526 aaKnown RBP eCLIP11.54□□□□□ -0.56
BRCC3-202ENST00000340647 ZNF876PQ49A33 203 aa11.54□□□□□ -0.56
BRCC3-202ENST00000340647 ZNF506Q5JVG8 444 aa11.54□□□□□ -0.56
BRCC3-202ENST00000340647 Q6ZSN1 163 aa11.54□□□□□ -0.56
BRCC3-202ENST00000340647 SLC25A29Q8N8R3 303 aa11.54□□□□□ -0.56
BRCC3-202ENST00000340647 PTH2Q96A98 100 aa11.54□□□□□ -0.56
BRCC3-202ENST00000340647 K7EQM0 130 aa11.53□□□□□ -0.56
BRCC3-202ENST00000340647 PEX7O00628 323 aa11.53□□□□□ -0.56
BRCC3-202ENST00000340647 CDK2AP2O75956 126 aa11.53□□□□□ -0.56
BRCC3-202ENST00000340647 ORM1P02763 201 aa11.53□□□□□ -0.56
BRCC3-202ENST00000340647 DNAH10OSP0CZ25 163 aa11.53□□□□□ -0.56
BRCC3-202ENST00000340647 Q9UF83 564 aa11.53□□□□□ -0.56
BRCC3-202ENST00000340647 HERC1Q15751 4861 aa11.53□□□□□ -0.56
BRCC3-202ENST00000340647 SAPCD1Q5SSQ6 148 aa11.52□□□□□ -0.57
BRCC3-202ENST00000340647 COX8CQ7Z4L0 72 aa11.52□□□□□ -0.57
BRCC3-202ENST00000340647 Q86TA4 180 aa11.52□□□□□ -0.57
BRCC3-202ENST00000340647 KCNRGQ8N5I3 272 aa11.52□□□□□ -0.57
BRCC3-202ENST00000340647 ZC2HC1AQ96GY0 325 aa11.52□□□□□ -0.57
BRCC3-202ENST00000340647 IGHV3-73A0A0B4J1V6 119 aa11.51□□□□□ -0.57
BRCC3-202ENST00000340647 MAP1LC3B2A6NCE7 125 aa11.51□□□□□ -0.57
BRCC3-202ENST00000340647 FBLL1A6NHQ2 334 aaKnown RBP11.51□□□□□ -0.57
BRCC3-202ENST00000340647 AKR1C8PQ5T2L2 129 aa11.51□□□□□ -0.57
BRCC3-202ENST00000340647 MAP1LC3BQ9GZQ8 125 aa11.51□□□□□ -0.57
BRCC3-202ENST00000340647 TIRAPP58753 221 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms