RNA–Protein interactions for RNA: ENST00000337299.6

COL2A1-201, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL2A1, Length 4,257 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-201ENST00000337299 IGHV3-73A0A0B4J1V6 119 aa10.45□□□□□ -0.74
COL2A1-201ENST00000337299 TRIOO75962 3097 aa10.45□□□□□ -0.74
COL2A1-201ENST00000337299 TCTEX1D4Q5JR98 221 aa10.44□□□□□ -0.74
COL2A1-201ENST00000337299 TNFRSF18Q9Y5U5 241 aa10.44□□□□□ -0.74
COL2A1-201ENST00000337299 SP5Q6BEB4 398 aaPredicted RBP10.44□□□□□ -0.74
COL2A1-201ENST00000337299 HIGD1BQ9P298 99 aa10.44□□□□□ -0.74
COL2A1-201ENST00000337299 FCN3O75636 299 aa10.44□□□□□ -0.74
COL2A1-201ENST00000337299 ZNF833PQ6ZTB9 187 aa10.44□□□□□ -0.74
COL2A1-201ENST00000337299 TRBV7-9A0A0J9YWB2 115 aa10.44□□□□□ -0.74
COL2A1-201ENST00000337299 HIST1H4AP62805 103 aaKnown RBP10.44□□□□□ -0.74
COL2A1-201ENST00000337299 ZNF876PQ49A33 203 aa10.44□□□□□ -0.74
COL2A1-201ENST00000337299 FAM57AQ8TBR7 257 aa10.44□□□□□ -0.74
COL2A1-201ENST00000337299 ARHGAP32A7KAX9 2087 aa10.43□□□□□ -0.74
COL2A1-201ENST00000337299 E9PLD3 99 aa10.43□□□□□ -0.74
COL2A1-201ENST00000337299 GAGE2AQ6NT46 116 aa10.43□□□□□ -0.74
COL2A1-201ENST00000337299 TMEM131Q92545 1883 aa10.43□□□□□ -0.74
COL2A1-201ENST00000337299 PDE6HQ13956 83 aa10.43□□□□□ -0.74
COL2A1-201ENST00000337299 UFSP1Q6NVU6 142 aa10.43□□□□□ -0.74
COL2A1-201ENST00000337299 RITA1Q96K30 269 aa10.43□□□□□ -0.74
COL2A1-201ENST00000337299 CFAP161Q6P656 301 aa10.43□□□□□ -0.74
COL2A1-201ENST00000337299 ZNF491Q8N8L2 437 aa10.43□□□□□ -0.74
COL2A1-201ENST00000337299 PRSS22Q9GZN4 317 aa10.43□□□□□ -0.74
COL2A1-201ENST00000337299 AGRNO00468 2067 aa10.42□□□□□ -0.74
COL2A1-201ENST00000337299 SIGLEC15Q6ZMC9 328 aa10.42□□□□□ -0.74
COL2A1-201ENST00000337299 C1orf229Q6ZS94 237 aaPredicted RBP10.42□□□□□ -0.74
COL2A1-201ENST00000337299 NAV2Q8IVL1 2488 aa10.42□□□□□ -0.74
COL2A1-201ENST00000337299 H3BRN7 92 aa10.42□□□□□ -0.74
COL2A1-201ENST00000337299 PLA2G2CQ5R387 149 aa10.42□□□□□ -0.74
COL2A1-201ENST00000337299 TMEM14CQ9P0S9 112 aa10.42□□□□□ -0.74
COL2A1-201ENST00000337299 CHD9Q3L8U1 2897 aa10.42□□□□□ -0.74
COL2A1-201ENST00000337299 TMEM178BH3BS89 294 aa10.42□□□□□ -0.74
COL2A1-201ENST00000337299 NUP37Q8NFH4 326 aa10.42□□□□□ -0.74
COL2A1-201ENST00000337299 LY6HO94772 140 aa10.41□□□□□ -0.74
COL2A1-201ENST00000337299 MAPKAPK5-AS1Q8N8E1 139 aa10.41□□□□□ -0.74
COL2A1-201ENST00000337299 WT1P19544 449 aaPredicted RBP10.41□□□□□ -0.74
COL2A1-201ENST00000337299 TRPT1Q86TN4 253 aaKnown RBP10.41□□□□□ -0.74
COL2A1-201ENST00000337299 RNASE6Q93091 150 aaKnown RBP10.41□□□□□ -0.74
COL2A1-201ENST00000337299 BUB1B-PAK6H3BSN5 160 aa10.41□□□□□ -0.74
COL2A1-201ENST00000337299 DYNAPQ8N1N2 210 aa10.41□□□□□ -0.74
COL2A1-201ENST00000337299 CARD19Q96LW7 228 aa10.41□□□□□ -0.74
COL2A1-201ENST00000337299 MLST8Q9BVC4 326 aa10.41□□□□□ -0.74
COL2A1-201ENST00000337299 J3QQQ9 107 aa10.4□□□□□ -0.74
COL2A1-201ENST00000337299 VCYO14598 125 aa10.4□□□□□ -0.74
COL2A1-201ENST00000337299 NPFFO15130 113 aa10.4□□□□□ -0.74
COL2A1-201ENST00000337299 IGKV1-17P01599 117 aa10.4□□□□□ -0.74
COL2A1-201ENST00000337299 CFC1BP0CG36 223 aa10.4□□□□□ -0.74
COL2A1-201ENST00000337299 CFC1P0CG37 223 aa10.4□□□□□ -0.74
COL2A1-201ENST00000337299 CFHR4Q92496 578 aa10.4□□□□□ -0.74
COL2A1-201ENST00000337299 K7EM74 188 aa10.4□□□□□ -0.74
COL2A1-201ENST00000337299 A4D1N5 150 aa10.4□□□□□ -0.75
COL2A1-201ENST00000337299 TEX36Q5VZQ5 186 aa10.4□□□□□ -0.75
COL2A1-201ENST00000337299 RPL39LQ96EH5 51 aaKnown RBP10.4□□□□□ -0.75
COL2A1-201ENST00000337299 USP9XQ93008 2570 aaPredicted RBP10.39□□□□□ -0.75
COL2A1-201ENST00000337299 C5orf64Q2M2E5 130 aa10.39□□□□□ -0.75
COL2A1-201ENST00000337299 PLEKHB2Q96CS7 222 aa10.39□□□□□ -0.75
COL2A1-201ENST00000337299 XGP55808 180 aa10.39□□□□□ -0.75
COL2A1-201ENST00000337299 FOXE3Q13461 319 aa10.39□□□□□ -0.75
COL2A1-201ENST00000337299 LTBP2Q14767 1821 aa10.39□□□□□ -0.75
COL2A1-201ENST00000337299 IGKV1D-37A0A075B6S9 117 aa10.39□□□□□ -0.75
COL2A1-201ENST00000337299 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.39□□□□□ -0.75
COL2A1-201ENST00000337299 PRR30Q53SZ7 412 aaPredicted RBP10.39□□□□□ -0.75
COL2A1-201ENST00000337299 TIMM21Q9BVV7 248 aa10.39□□□□□ -0.75
COL2A1-201ENST00000337299 C1orf159Q96HA4 380 aa10.38□□□□□ -0.75
COL2A1-201ENST00000337299 LINC00477Q96M19 166 aa10.38□□□□□ -0.75
COL2A1-201ENST00000337299 YAE1D1Q9NRH1 226 aa10.38□□□□□ -0.75
COL2A1-201ENST00000337299 A0A1W2PNU3 283 aaPredicted RBP10.38□□□□□ -0.75
COL2A1-201ENST00000337299 TCL1BO95988 128 aa10.38□□□□□ -0.75
COL2A1-201ENST00000337299 CR1LQ2VPA4 569 aa10.38□□□□□ -0.75
COL2A1-201ENST00000337299 RNASE13Q5GAN3 156 aaKnown RBP10.37□□□□□ -0.75
COL2A1-201ENST00000337299 DUX3Q96PT4 197 aa10.37□□□□□ -0.75
COL2A1-201ENST00000337299 HIVEP3Q5T1R4 2406 aa10.37□□□□□ -0.75
COL2A1-201ENST00000337299 FAM236AA0A1B0GUQ0 79 aa10.37□□□□□ -0.75
COL2A1-201ENST00000337299 FAM236BA0A1B0GV22 79 aa10.37□□□□□ -0.75
COL2A1-201ENST00000337299 LGALS1P09382 135 aaKnown RBP10.37□□□□□ -0.75
COL2A1-201ENST00000337299 ZNF493Q6ZR52 646 aa10.37□□□□□ -0.75
COL2A1-201ENST00000337299 DUX5Q96PT3 197 aa10.37□□□□□ -0.75
COL2A1-201ENST00000337299 SDHAF1A6NFY7 115 aa10.37□□□□□ -0.75
COL2A1-201ENST00000337299 EIF4EBP1Q13541 118 aaPredicted RBP10.36□□□□□ -0.75
COL2A1-201ENST00000337299 B9A039 149 aa10.36□□□□□ -0.75
COL2A1-201ENST00000337299 WISP2O76076 250 aa10.36□□□□□ -0.75
COL2A1-201ENST00000337299 DUSP14O95147 198 aaKnown RBP10.36□□□□□ -0.75
COL2A1-201ENST00000337299 NDUFV3P56181 108 aaKnown RBP10.36□□□□□ -0.75
COL2A1-201ENST00000337299 TM2D2Q9BX73 214 aa10.36□□□□□ -0.75
COL2A1-201ENST00000337299 SHISA9B4DS77 424 aa10.36□□□□□ -0.75
COL2A1-201ENST00000337299 TMEM219Q86XT9 240 aa10.36□□□□□ -0.75
COL2A1-201ENST00000337299 AGPAT4-IT1Q9H0P7 198 aa10.36□□□□□ -0.75
COL2A1-201ENST00000337299 ATG2AQ2TAZ0 1938 aa10.36□□□□□ -0.75
COL2A1-201ENST00000337299 PAX8Q06710 450 aa10.35□□□□□ -0.75
COL2A1-201ENST00000337299 Q6ZS92 163 aa10.35□□□□□ -0.75
COL2A1-201ENST00000337299 PRO3102Q9H379 93 aa10.35□□□□□ -0.75
COL2A1-201ENST00000337299 LOXP28300 417 aaPredicted RBP10.35□□□□□ -0.75
COL2A1-201ENST00000337299 GATD1Q8NB37 220 aa10.35□□□□□ -0.75
COL2A1-201ENST00000337299 PRAC2D3DTV9 90 aa10.34□□□□□ -0.75
COL2A1-201ENST00000337299 LINC01620Q4KN68 170 aa10.34□□□□□ -0.75
COL2A1-201ENST00000337299 SPATA25Q9BR10 227 aa10.34□□□□□ -0.75
COL2A1-201ENST00000337299 UBE2L6O14933 153 aa10.34□□□□□ -0.75
COL2A1-201ENST00000337299 COPS9Q8WXC6 57 aa10.34□□□□□ -0.75
COL2A1-201ENST00000337299 ZNF80P51504 273 aaPredicted RBP10.33□□□□□ -0.76
COL2A1-201ENST00000337299 A0A0G2JNJ9 132 aa10.33□□□□□ -0.76
COL2A1-201ENST00000337299 SNRPD3P62318 126 aaKnown RBP10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms