RNA–Protein interactions for RNA: ENST00000316763.7

VRK3-201, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK3, Length 1,938 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-201ENST00000316763 TRAV8-2A0A0B4J237 113 aa10.82□□□□□ -0.68
VRK3-201ENST00000316763 G0S2P27469 103 aa10.82□□□□□ -0.68
VRK3-201ENST00000316763 TMEM86BQ8N661 226 aa10.82□□□□□ -0.68
VRK3-201ENST00000316763 C16orf92Q96LL3 132 aa10.82□□□□□ -0.68
VRK3-201ENST00000316763 LINC00527Q9UJ94 153 aa10.82□□□□□ -0.68
VRK3-201ENST00000316763 H0Y8G0 127 aa10.81□□□□□ -0.68
VRK3-201ENST00000316763 NDUFA4O00483 81 aa10.81□□□□□ -0.68
VRK3-201ENST00000316763 C9orf47Q6ZRZ4 202 aa10.81□□□□□ -0.68
VRK3-201ENST00000316763 PPP1R14DQ9NXH3 145 aa10.81□□□□□ -0.68
VRK3-201ENST00000316763 CFHR3Q02985 330 aa10.8□□□□□ -0.68
VRK3-201ENST00000316763 GLMPQ8WWB7 406 aa10.8□□□□□ -0.68
VRK3-201ENST00000316763 CUBNO60494 3623 aa10.8□□□□□ -0.68
VRK3-201ENST00000316763 hDV102S1A0JD36 115 aa10.8□□□□□ -0.68
VRK3-201ENST00000316763 SLC25A34Q6PIV7 304 aa10.8□□□□□ -0.68
VRK3-201ENST00000316763 ZNF575Q86XF7 245 aa10.8□□□□□ -0.68
VRK3-201ENST00000316763 DUX5Q96PT3 197 aa10.8□□□□□ -0.68
VRK3-201ENST00000316763 ESM1Q9NQ30 184 aa10.8□□□□□ -0.68
VRK3-201ENST00000316763 TCF21O43680 179 aa10.79□□□□□ -0.68
VRK3-201ENST00000316763 HBDP02042 147 aa10.79□□□□□ -0.68
VRK3-201ENST00000316763 GAGE1Q13065 139 aa10.79□□□□□ -0.68
VRK3-201ENST00000316763 ZNF418Q8TF45 676 aaPredicted RBP10.79□□□□□ -0.68
VRK3-201ENST00000316763 NPFFR1Q9GZQ6 430 aa10.79□□□□□ -0.68
VRK3-201ENST00000316763 MAP1LC3AQ9H492 121 aa10.79□□□□□ -0.68
VRK3-201ENST00000316763 LENEPQ9Y5L5 61 aa10.79□□□□□ -0.68
VRK3-201ENST00000316763 NPYP01303 97 aa10.78□□□□□ -0.68
VRK3-201ENST00000316763 IGLV1-40P01703 118 aa10.78□□□□□ -0.68
VRK3-201ENST00000316763 HINT1P49773 126 aaPredicted RBP10.78□□□□□ -0.68
VRK3-201ENST00000316763 SMIM15Q7Z3B0 74 aa10.78□□□□□ -0.68
VRK3-201ENST00000316763 STPG4Q8N801 248 aa10.78□□□□□ -0.68
VRK3-201ENST00000316763 TMEM208Q9BTX3 173 aa10.78□□□□□ -0.68
VRK3-201ENST00000316763 ZNF702PQ9H963 129 aa10.78□□□□□ -0.68
VRK3-201ENST00000316763 DNAJC9-AS1A6NH13 148 aa10.78□□□□□ -0.68
VRK3-201ENST00000316763 DLEU1O43261 78 aa10.78□□□□□ -0.68
VRK3-201ENST00000316763 TFPI2P48307 235 aa10.78□□□□□ -0.68
VRK3-201ENST00000316763 FAM106AQ4KMX7 169 aa10.78□□□□□ -0.68
VRK3-201ENST00000316763 Q8N2B8 174 aa10.78□□□□□ -0.68
VRK3-201ENST00000316763 ZNF738Q8NE65 137 aa10.78□□□□□ -0.68
VRK3-201ENST00000316763 OR8A1Q8NGG7 326 aa10.78□□□□□ -0.68
VRK3-201ENST00000316763 RNF185Q96GF1 192 aa10.78□□□□□ -0.68
VRK3-201ENST00000316763 MSRB1Q9NZV6 116 aa10.78□□□□□ -0.68
VRK3-201ENST00000316763 NIPBLQ6KC79 2804 aaeCLIP10.77□□□□□ -0.68
VRK3-201ENST00000316763 A0A0G2JLM5 398 aa10.77□□□□□ -0.69
VRK3-201ENST00000316763 SMKR1H3BMG3 65 aa10.77□□□□□ -0.69
VRK3-201ENST00000316763 PF4V1P10720 104 aa10.77□□□□□ -0.69
VRK3-201ENST00000316763 TMEM95Q3KNT9 176 aa10.77□□□□□ -0.69
VRK3-201ENST00000316763 LINC00477Q96M19 166 aa10.77□□□□□ -0.69
VRK3-201ENST00000316763 SCRT2Q9NQ03 307 aa10.77□□□□□ -0.69
VRK3-201ENST00000316763 A0A096LNJ9 63 aa10.76□□□□□ -0.69
VRK3-201ENST00000316763 IGKV3D-20A0A0C4DH25 116 aa10.76□□□□□ -0.69
VRK3-201ENST00000316763 OVOL1O14753 267 aa10.76□□□□□ -0.69
VRK3-201ENST00000316763 NCR2O95944 276 aa10.76□□□□□ -0.69
VRK3-201ENST00000316763 HILS1P60008 231 aa10.76□□□□□ -0.69
VRK3-201ENST00000316763 OR10J6PQ8NGY7 276 aa10.76□□□□□ -0.69
VRK3-201ENST00000316763 PMCHL2Q9BQD1 86 aa10.76□□□□□ -0.69
VRK3-201ENST00000316763 MCRIP2Q9BUT9 160 aaKnown RBP10.76□□□□□ -0.69
VRK3-201ENST00000316763 NXT2Q9NPJ8 142 aaKnown RBP10.76□□□□□ -0.69
VRK3-201ENST00000316763 CACNG7P62955 275 aa10.76□□□□□ -0.69
VRK3-201ENST00000316763 LGALS9BQ3B8N2 356 aa10.76□□□□□ -0.69
VRK3-201ENST00000316763 LGALS9CQ6DKI2 356 aa10.76□□□□□ -0.69
VRK3-201ENST00000316763 GOLT1BQ9Y3E0 138 aa10.76□□□□□ -0.69
VRK3-201ENST00000316763 TRBV12-3P01733 135 aa10.75□□□□□ -0.69
VRK3-201ENST00000316763 UNQ9165/PRO28630Q6UXU0 137 aa10.75□□□□□ -0.69
VRK3-201ENST00000316763 OR4X2Q8NGF9 303 aa10.75□□□□□ -0.69
VRK3-201ENST00000316763 DPF1Q92782 380 aa10.75□□□□□ -0.69
VRK3-201ENST00000316763 KLK15Q9H2R5 256 aa10.75□□□□□ -0.69
VRK3-201ENST00000316763 C11orf21Q9P2W6 132 aa10.75□□□□□ -0.69
VRK3-201ENST00000316763 TMEM89A2RUT3 159 aa10.74□□□□□ -0.69
VRK3-201ENST00000316763 LINC01546A6NGU7 62 aa10.74□□□□□ -0.69
VRK3-201ENST00000316763 TNFRSF6BO95407 300 aa10.74□□□□□ -0.69
VRK3-201ENST00000316763 IFI27L1Q96BM0 104 aa10.74□□□□□ -0.69
VRK3-201ENST00000316763 IGHV3-11P01762 117 aa10.74□□□□□ -0.69
VRK3-201ENST00000316763 PSMB8P28062 276 aa10.74□□□□□ -0.69
VRK3-201ENST00000316763 C20orf173Q96LM9 149 aa10.74□□□□□ -0.69
VRK3-201ENST00000316763 JMJD8Q96S16 334 aa10.74□□□□□ -0.69
VRK3-201ENST00000316763 IGHV4-4A0A075B6R2 117 aa10.72□□□□□ -0.69
VRK3-201ENST00000316763 IGHV7-4-1A0A0J9YVY3 117 aa10.72□□□□□ -0.69
VRK3-201ENST00000316763 SNAI2O43623 268 aa10.72□□□□□ -0.69
VRK3-201ENST00000316763 RNASE1P07998 156 aaKnown RBP10.72□□□□□ -0.69
VRK3-201ENST00000316763 COX8AP10176 69 aa10.72□□□□□ -0.69
VRK3-201ENST00000316763 RPL11P62913 178 aaKnown RBP10.72□□□□□ -0.69
VRK3-201ENST00000316763 FOXE3Q13461 319 aa10.72□□□□□ -0.69
VRK3-201ENST00000316763 SPANXN1Q5VSR9 72 aa10.72□□□□□ -0.69
VRK3-201ENST00000316763 C12orf54Q6X4T0 127 aa10.72□□□□□ -0.69
VRK3-201ENST00000316763 OR1N2Q8NGR9 330 aa10.72□□□□□ -0.69
VRK3-201ENST00000316763 ORAOV1Q8WV07 137 aa10.72□□□□□ -0.69
VRK3-201ENST00000316763 NF1P21359 2839 aa10.72□□□□□ -0.69
VRK3-201ENST00000316763 TRAV21A0A0B4J279 112 aa10.72□□□□□ -0.69
VRK3-201ENST00000316763 SOCS3O14543 225 aa10.72□□□□□ -0.69
VRK3-201ENST00000316763 FCER1GP30273 86 aa10.72□□□□□ -0.69
VRK3-201ENST00000316763 FXYD7P58549 80 aa10.71□□□□□ -0.69
VRK3-201ENST00000316763 ZNF124Q15973 351 aa10.71□□□□□ -0.69
VRK3-201ENST00000316763 C10orf99Q6UWK7 81 aa10.71□□□□□ -0.69
VRK3-201ENST00000316763 LCNL1Q6ZST4 164 aa10.71□□□□□ -0.69
VRK3-201ENST00000316763 GPHB5Q86YW7 130 aa10.71□□□□□ -0.69
VRK3-201ENST00000316763 Q8N8P6 123 aa10.71□□□□□ -0.69
VRK3-201ENST00000316763 LEPP41159 167 aa10.7□□□□□ -0.7
VRK3-201ENST00000316763 RNF152Q8N8N0 203 aa10.7□□□□□ -0.7
VRK3-201ENST00000316763 OR2K2Q8NGT1 345 aa10.7□□□□□ -0.7
VRK3-201ENST00000316763 RHPN1-AS1Q9BWJ2 59 aa10.7□□□□□ -0.7
VRK3-201ENST00000316763 DAZ1Q9NQZ3 744 aaKnown RBP10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms