RNA–Protein interactions for RNA: ENST00000307340.7

USH2A-201, Transcript of usherin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USH2A, Length 18,883 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-201ENST00000307340 Q8N1Y9 231 aa3.19□□□□□ -1.9
USH2A-201ENST00000307340 TOMM6Q96B49 74 aa3.19□□□□□ -1.9
USH2A-201ENST00000307340 SH2D1AO60880 128 aa3.19□□□□□ -1.9
USH2A-201ENST00000307340 LY6DQ14210 128 aa3.19□□□□□ -1.9
USH2A-201ENST00000307340 SPINK8P0C7L1 97 aa3.19□□□□□ -1.9
USH2A-201ENST00000307340 P0DMU3 169 aa3.19□□□□□ -1.9
USH2A-201ENST00000307340 FAM231AP0DMU4 169 aa3.19□□□□□ -1.9
USH2A-201ENST00000307340 FAM231CP0DMU5 169 aa3.19□□□□□ -1.9
USH2A-201ENST00000307340 SPINK9Q5DT21 86 aa3.19□□□□□ -1.9
USH2A-201ENST00000307340 CD177Q8N6Q3 437 aa3.19□□□□□ -1.9
USH2A-201ENST00000307340 ZNF747Q9BV97 191 aa3.19□□□□□ -1.9
USH2A-201ENST00000307340 SPRR3Q9UBC9 169 aa3.19□□□□□ -1.9
USH2A-201ENST00000307340 CSDC2Q9Y534 153 aaKnown RBP3.19□□□□□ -1.9
USH2A-201ENST00000307340 MUC21A0A0G2JKD1 596 aa3.19□□□□□ -1.9
USH2A-201ENST00000307340 MUC21A0A140T8X8 626 aa3.19□□□□□ -1.9
USH2A-201ENST00000307340 MUC21Q5SSG8 566 aa3.19□□□□□ -1.9
USH2A-201ENST00000307340 GAGE12JA6NER3 117 aa3.19□□□□□ -1.9
USH2A-201ENST00000307340 GAGE7O76087 117 aa3.19□□□□□ -1.9
USH2A-201ENST00000307340 GAGE12FP0CL80 117 aa3.19□□□□□ -1.9
USH2A-201ENST00000307340 GAGE12GP0CL81 117 aa3.19□□□□□ -1.9
USH2A-201ENST00000307340 GAGE12IP0CL82 117 aa3.19□□□□□ -1.9
USH2A-201ENST00000307340 GAGE4Q13068 117 aa3.19□□□□□ -1.9
USH2A-201ENST00000307340 J3QQQ9 107 aa3.19□□□□□ -1.9
USH2A-201ENST00000307340 IGHG2P01859 326 aa3.19□□□□□ -1.9
USH2A-201ENST00000307340 C8orf86Q6ZUL3 223 aa3.19□□□□□ -1.9
USH2A-201ENST00000307340 SNHG12Q9BXW3 62 aa3.19□□□□□ -1.9
USH2A-201ENST00000307340 HIST2H2BCQ6DN03 193 aa3.19□□□□□ -1.9
USH2A-201ENST00000307340 HIST2H2BDQ6DRA6 164 aa3.19□□□□□ -1.9
USH2A-201ENST00000307340 IGHV1OR15-1A0A075B7D0 117 aa3.19□□□□□ -1.9
USH2A-201ENST00000307340 NPC2P61916 151 aa3.19□□□□□ -1.9
USH2A-201ENST00000307340 IGHV3OR15-7A0A075B7D8 119 aa3.19□□□□□ -1.9
USH2A-201ENST00000307340 NSUN5P1Q3KNT7 163 aa3.19□□□□□ -1.9
USH2A-201ENST00000307340 LINC00473A8K010 186 aa3.19□□□□□ -1.9
USH2A-201ENST00000307340 IGLC1P0CG04 106 aa3.19□□□□□ -1.9
USH2A-201ENST00000307340 MORN5Q5VZ52 161 aa3.19□□□□□ -1.9
USH2A-201ENST00000307340 ZNF491Q8N8L2 437 aa3.18□□□□□ -1.9
USH2A-201ENST00000307340 IGKV1D-43A0A0B4J1Z2 117 aa3.18□□□□□ -1.9
USH2A-201ENST00000307340 OPRPNQ99935 248 aaPredicted RBP3.18□□□□□ -1.9
USH2A-201ENST00000307340 RHPN1-AS1Q9BWJ2 59 aa3.18□□□□□ -1.9
USH2A-201ENST00000307340 PRORYQ9H606 182 aa3.18□□□□□ -1.9
USH2A-201ENST00000307340 PTPRQQ9UMZ3 2332 aa3.18□□□□□ -1.9
USH2A-201ENST00000307340 F6UB75 175 aa3.18□□□□□ -1.9
USH2A-201ENST00000307340 LINC00474Q9P2X8 69 aa3.18□□□□□ -1.9
USH2A-201ENST00000307340 MED19A0JLT2 244 aaPredicted RBP3.18□□□□□ -1.9
USH2A-201ENST00000307340 TMEM263Q8WUH6 116 aaKnown RBP3.18□□□□□ -1.9
USH2A-201ENST00000307340 CHCHD7Q9BUK0 85 aa3.18□□□□□ -1.9
USH2A-201ENST00000307340 RETNQ9HD89 108 aa3.18□□□□□ -1.9
USH2A-201ENST00000307340 HIVEP2P31629 2446 aa3.18□□□□□ -1.9
USH2A-201ENST00000307340 IGKV1-12A0A0C4DH73 117 aa3.18□□□□□ -1.9
USH2A-201ENST00000307340 IGKV1D-12P01611 117 aa3.18□□□□□ -1.9
USH2A-201ENST00000307340 IGF1P05019 195 aa3.18□□□□□ -1.9
USH2A-201ENST00000307340 PRR31Q5SQ13 230 aa3.18□□□□□ -1.9
USH2A-201ENST00000307340 C9orf106Q8NAJ2 232 aa3.18□□□□□ -1.9
USH2A-201ENST00000307340 IGHV4-4A0A075B6R2 117 aa3.18□□□□□ -1.9
USH2A-201ENST00000307340 LINC01561Q8N1V8 128 aa3.18□□□□□ -1.9
USH2A-201ENST00000307340 SPG11Q96JI7 2443 aa3.18□□□□□ -1.9
USH2A-201ENST00000307340 NDUFC2-KCTD14E9PQ53 114 aa3.18□□□□□ -1.9
USH2A-201ENST00000307340 ADORA2A-AS1P86434 159 aa3.18□□□□□ -1.9
USH2A-201ENST00000307340 FAM19A2Q8N3H0 131 aa3.18□□□□□ -1.9
USH2A-201ENST00000307340 C10orf105Q8TEF2 133 aa3.18□□□□□ -1.9
USH2A-201ENST00000307340 TRAV8-1A0A0A6YYK1 113 aa3.18□□□□□ -1.9
USH2A-201ENST00000307340 TRAV40A0A0B4J280 105 aa3.18□□□□□ -1.9
USH2A-201ENST00000307340 MP68P56378 58 aa3.18□□□□□ -1.9
USH2A-201ENST00000307340 GOLGB1Q14789 3259 aaKnown RBP3.18□□□□□ -1.9
USH2A-201ENST00000307340 IGLV11-55A0A075B6I3 123 aa3.18□□□□□ -1.9
USH2A-201ENST00000307340 C9JAW5 83 aa3.18□□□□□ -1.9
USH2A-201ENST00000307340 TGFBR3LH3BV60 316 aa3.18□□□□□ -1.9
USH2A-201ENST00000307340 CFHR4Q92496 578 aa3.18□□□□□ -1.9
USH2A-201ENST00000307340 TGFAP01135 160 aa3.18□□□□□ -1.9
USH2A-201ENST00000307340 C4orf3Q8WVX3 66 aa3.18□□□□□ -1.9
USH2A-201ENST00000307340 A0A0G2JNJ9 132 aa3.17□□□□□ -1.9
USH2A-201ENST00000307340 BUB3O43684 328 aa3.17□□□□□ -1.9
USH2A-201ENST00000307340 PTH2Q96A98 100 aa3.17□□□□□ -1.9
USH2A-201ENST00000307340 Q9UFV3 132 aa3.17□□□□□ -1.9
USH2A-201ENST00000307340 IGKV1-16P04430 117 aa3.17□□□□□ -1.9
USH2A-201ENST00000307340 CCL24O00175 119 aa3.17□□□□□ -1.9
USH2A-201ENST00000307340 MPV17L2Q567V2 206 aa3.17□□□□□ -1.9
USH2A-201ENST00000307340 SCRT1Q9BWW7 348 aa3.17□□□□□ -1.9
USH2A-201ENST00000307340 TINCRA0A1B0GVN0 87 aa3.17□□□□□ -1.9
USH2A-201ENST00000307340 UQCRQO14949 82 aa3.17□□□□□ -1.9
USH2A-201ENST00000307340 ARMS2P0C7Q2 107 aa3.17□□□□□ -1.9
USH2A-201ENST00000307340 HIGD2BQ4VC39 106 aa3.17□□□□□ -1.9
USH2A-201ENST00000307340 PIP4P1Q86T03 277 aa3.17□□□□□ -1.9
USH2A-201ENST00000307340 PRSS33Q8NF86 280 aa3.17□□□□□ -1.9
USH2A-201ENST00000307340 IGFBP6P24592 240 aaPredicted RBP3.17□□□□□ -1.9
USH2A-201ENST00000307340 C9orf66Q5T8R8 295 aa3.17□□□□□ -1.9
USH2A-201ENST00000307340 CDPF1Q6NVV7 123 aa3.17□□□□□ -1.9
USH2A-201ENST00000307340 FGF6P10767 208 aa3.17□□□□□ -1.9
USH2A-201ENST00000307340 LINC00643Q86TS7 51 aa3.17□□□□□ -1.9
USH2A-201ENST00000307340 VWCEQ96DN2 955 aa3.17□□□□□ -1.9
USH2A-201ENST00000307340 IBA57-AS1B1ANH7 110 aa3.17□□□□□ -1.9
USH2A-201ENST00000307340 PAX4O43316 350 aa3.17□□□□□ -1.9
USH2A-201ENST00000307340 ITLN2Q8WWU7 325 aaPredicted RBP3.17□□□□□ -1.9
USH2A-201ENST00000307340 SPRY4Q9C004 299 aa3.17□□□□□ -1.9
USH2A-201ENST00000307340 FAM27E3Q08E93 113 aa3.17□□□□□ -1.9
USH2A-201ENST00000307340 SCRT2Q9NQ03 307 aa3.17□□□□□ -1.9
USH2A-201ENST00000307340 POLR3KQ9Y2Y1 108 aaPredicted RBP3.17□□□□□ -1.9
USH2A-201ENST00000307340 IGHV7-4-1A0A0J9YVY3 117 aa3.17□□□□□ -1.9
USH2A-201ENST00000307340 C18orf15Q96N68 181 aa3.17□□□□□ -1.9
USH2A-201ENST00000307340 WISP1O95388 367 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms