RNA–Protein interactions for RNA: ENST00000299185.12

DEPDC4-201, Transcript of DEP domain containing 4, humanhuman

TSL 1 (best)

Gene DEPDC4, Length 768 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-201ENST00000299185 KRBOX1C9JBD0 128 aa4.68□□□□□ -1.66
DEPDC4-201ENST00000299185 PDE6DO43924 150 aa4.68□□□□□ -1.66
DEPDC4-201ENST00000299185 GPX1P07203 203 aa4.68□□□□□ -1.66
DEPDC4-201ENST00000299185 GZMBP10144 247 aa4.68□□□□□ -1.66
DEPDC4-201ENST00000299185 AZU1P20160 251 aa4.68□□□□□ -1.66
DEPDC4-201ENST00000299185 CDKN1BP46527 198 aa4.68□□□□□ -1.66
DEPDC4-201ENST00000299185 EMP1P54849 157 aa4.68□□□□□ -1.66
DEPDC4-201ENST00000299185 APOC4P55056 127 aa4.68□□□□□ -1.66
DEPDC4-201ENST00000299185 ANXA2RQ3ZCQ2 193 aa4.68□□□□□ -1.66
DEPDC4-201ENST00000299185 LINC00477Q96M19 166 aa4.68□□□□□ -1.66
DEPDC4-201ENST00000299185 ODF3Q96PU9 254 aa4.68□□□□□ -1.66
DEPDC4-201ENST00000299185 NDFIP1Q9BT67 221 aa4.68□□□□□ -1.66
DEPDC4-201ENST00000299185 CELA1Q9UNI1 258 aa4.68□□□□□ -1.66
DEPDC4-201ENST00000299185 KLF12Q9Y4X4 402 aa4.68□□□□□ -1.66
DEPDC4-201ENST00000299185 HUWE1Q7Z6Z7 4374 aaKnown RBP4.67□□□□□ -1.66
DEPDC4-201ENST00000299185 BIRC6Q9NR09 4857 aa4.67□□□□□ -1.66
DEPDC4-201ENST00000299185 MUC21A0A0G2JKD1 596 aa4.67□□□□□ -1.66
DEPDC4-201ENST00000299185 TRBV6-1A0A0K0K1D8 114 aa4.67□□□□□ -1.66
DEPDC4-201ENST00000299185 MUC21A0A140T8X8 626 aa4.67□□□□□ -1.66
DEPDC4-201ENST00000299185 SERTM2A0A1B0GWG4 89 aa4.67□□□□□ -1.66
DEPDC4-201ENST00000299185 TMEM218A2RU14 115 aa4.67□□□□□ -1.66
DEPDC4-201ENST00000299185 ZNF727A8MUV8 499 aa4.67□□□□□ -1.66
DEPDC4-201ENST00000299185 TMEM250H0YL14 139 aa4.67□□□□□ -1.66
DEPDC4-201ENST00000299185 K7EQM0 130 aa4.67□□□□□ -1.66
DEPDC4-201ENST00000299185 TYMSP04818 313 aa4.67□□□□□ -1.66
DEPDC4-201ENST00000299185 TSPOP30536 169 aa4.67□□□□□ -1.66
DEPDC4-201ENST00000299185 GNG4P50150 75 aa4.67□□□□□ -1.66
DEPDC4-201ENST00000299185 ADIRFQ15847 76 aa4.67□□□□□ -1.66
DEPDC4-201ENST00000299185 SMUG1Q53HV7 270 aa4.67□□□□□ -1.66
DEPDC4-201ENST00000299185 MORN3Q6PF18 240 aaPredicted RBP4.67□□□□□ -1.66
DEPDC4-201ENST00000299185 TMEM183AQ8IXX5 376 aa4.67□□□□□ -1.66
DEPDC4-201ENST00000299185 NUDT10Q8NFP7 164 aa4.67□□□□□ -1.66
DEPDC4-201ENST00000299185 OR11H2Q8NH07 326 aa4.67□□□□□ -1.66
DEPDC4-201ENST00000299185 OCC1Q8TAD7 63 aa4.67□□□□□ -1.66
DEPDC4-201ENST00000299185 NUDT11Q96G61 164 aa4.67□□□□□ -1.66
DEPDC4-201ENST00000299185 RCHY1Q96PM5 261 aa4.67□□□□□ -1.66
DEPDC4-201ENST00000299185 LINC01587Q99440 93 aa4.67□□□□□ -1.66
DEPDC4-201ENST00000299185 B9D2Q9BPU9 175 aa4.67□□□□□ -1.66
DEPDC4-201ENST00000299185 TM2D3Q9BRN9 247 aa4.67□□□□□ -1.66
DEPDC4-201ENST00000299185 TMEM208Q9BTX3 173 aa4.67□□□□□ -1.66
DEPDC4-201ENST00000299185 RNASE7Q9H1E1 156 aaKnown RBP4.67□□□□□ -1.66
DEPDC4-201ENST00000299185 ZMAT5Q9UDW3 170 aaKnown RBP4.67□□□□□ -1.66
DEPDC4-201ENST00000299185 TNFRSF18Q9Y5U5 241 aa4.67□□□□□ -1.66
DEPDC4-201ENST00000299185 DNAH9Q9NYC9 4486 aa4.67□□□□□ -1.66
DEPDC4-201ENST00000299185 IGKV3D-20A0A0C4DH25 116 aa4.66□□□□□ -1.66
DEPDC4-201ENST00000299185 KIR2DL5BA0A0G2JN68 375 aa4.66□□□□□ -1.66
DEPDC4-201ENST00000299185 KIR2DL5BA0A0G2JPC4 375 aa4.66□□□□□ -1.66
DEPDC4-201ENST00000299185 A0A0J9YWU9 116 aa4.66□□□□□ -1.66
DEPDC4-201ENST00000299185 PLAC8L1A1L4L8 177 aa4.66□□□□□ -1.66
DEPDC4-201ENST00000299185 H3BVH4 76 aa4.66□□□□□ -1.66
DEPDC4-201ENST00000299185 GNRH2O43555 120 aa4.66□□□□□ -1.66
DEPDC4-201ENST00000299185 ZNF324O75467 553 aaPredicted RBP4.66□□□□□ -1.66
DEPDC4-201ENST00000299185 TCL1AP56279 114 aa4.66□□□□□ -1.66
DEPDC4-201ENST00000299185 TAS2R60P59551 318 aa4.66□□□□□ -1.66
DEPDC4-201ENST00000299185 RPL23P62829 140 aaKnown RBP4.66□□□□□ -1.66
DEPDC4-201ENST00000299185 C21orf62-AS1Q17RA5 79 aa4.66□□□□□ -1.66
DEPDC4-201ENST00000299185 SOHLH1Q5JUK2 328 aa4.66□□□□□ -1.66
DEPDC4-201ENST00000299185 C10orf91Q5T1B1 145 aa4.66□□□□□ -1.66
DEPDC4-201ENST00000299185 Q6AWC8 147 aa4.66□□□□□ -1.66
DEPDC4-201ENST00000299185 ZNF705AQ6ZN79 300 aaPredicted RBP4.66□□□□□ -1.66
DEPDC4-201ENST00000299185 LINC01551Q86U37 167 aa4.66□□□□□ -1.66
DEPDC4-201ENST00000299185 KIR2DL5AQ8N109 375 aa4.66□□□□□ -1.66
DEPDC4-201ENST00000299185 Q8NAQ8 132 aa4.66□□□□□ -1.66
DEPDC4-201ENST00000299185 KIR2DL5BQ8NHK3 375 aa4.66□□□□□ -1.66
DEPDC4-201ENST00000299185 RNF183Q96D59 192 aa4.66□□□□□ -1.66
DEPDC4-201ENST00000299185 TCEAL7Q9BRU2 100 aa4.66□□□□□ -1.66
DEPDC4-201ENST00000299185 NIPSNAP3BQ9BS92 247 aa4.66□□□□□ -1.66
DEPDC4-201ENST00000299185 MLST8Q9BVC4 326 aa4.66□□□□□ -1.66
DEPDC4-201ENST00000299185 SEC11CQ9BY50 192 aa4.66□□□□□ -1.66
DEPDC4-201ENST00000299185 MRPL16Q9NX20 251 aaKnown RBP4.66□□□□□ -1.66
DEPDC4-201ENST00000299185 GOLT1BQ9Y3E0 138 aa4.66□□□□□ -1.66
DEPDC4-201ENST00000299185 PRKDCP78527 4128 aaKnown RBP4.66□□□□□ -1.66
DEPDC4-201ENST00000299185 IGHV1OR15-1A0A075B7D0 117 aa4.65□□□□□ -1.67
DEPDC4-201ENST00000299185 CBY3A6NI87 242 aa4.65□□□□□ -1.67
DEPDC4-201ENST00000299185 C9JCJ5 164 aa4.65□□□□□ -1.67
DEPDC4-201ENST00000299185 F8W036 122 aa4.65□□□□□ -1.67
DEPDC4-201ENST00000299185 SSTP61278 116 aa4.65□□□□□ -1.67
DEPDC4-201ENST00000299185 FAM74A3Q4VXF1 159 aa4.65□□□□□ -1.67
DEPDC4-201ENST00000299185 ARL6IP6Q8N6S5 226 aa4.65□□□□□ -1.67
DEPDC4-201ENST00000299185 C11orf72Q8NBR9 251 aa4.65□□□□□ -1.67
DEPDC4-201ENST00000299185 ISOC2Q96AB3 205 aa4.65□□□□□ -1.67
DEPDC4-201ENST00000299185 GSN-AS1Q9NRJ2 163 aa4.65□□□□□ -1.67
DEPDC4-201ENST00000299185 MDFICQ9P1T7 246 aa4.65□□□□□ -1.67
DEPDC4-201ENST00000299185 CARHSP1Q9Y2V2 147 aaKnown RBP4.65□□□□□ -1.67
DEPDC4-201ENST00000299185 TRAV21A0A0B4J279 112 aa4.64□□□□□ -1.67
DEPDC4-201ENST00000299185 IGHV3-16A0A0C4DH30 117 aa4.64□□□□□ -1.67
DEPDC4-201ENST00000299185 C19orf71A6NCJ1 209 aa4.64□□□□□ -1.67
DEPDC4-201ENST00000299185 B4DEV8 164 aa4.64□□□□□ -1.67
DEPDC4-201ENST00000299185 H7BYZ3 331 aa4.64□□□□□ -1.67
DEPDC4-201ENST00000299185 UBE2CO00762 179 aa4.64□□□□□ -1.67
DEPDC4-201ENST00000299185 AMBPP02760 352 aa4.64□□□□□ -1.67
DEPDC4-201ENST00000299185 ORM1P02763 201 aa4.64□□□□□ -1.67
DEPDC4-201ENST00000299185 PFN1P07737 140 aaKnown RBP4.64□□□□□ -1.67
DEPDC4-201ENST00000299185 NUTF2P61970 127 aaKnown RBP4.64□□□□□ -1.67
DEPDC4-201ENST00000299185 SAPCD1Q5SSQ6 148 aa4.64□□□□□ -1.67
DEPDC4-201ENST00000299185 FAM162BQ5T6X4 162 aa4.64□□□□□ -1.67
DEPDC4-201ENST00000299185 Q6ZWC4 215 aa4.64□□□□□ -1.67
DEPDC4-201ENST00000299185 OR2D3Q8NGH3 330 aa4.64□□□□□ -1.67
DEPDC4-201ENST00000299185 RNASE8Q8TDE3 154 aaKnown RBP4.64□□□□□ -1.67
DEPDC4-201ENST00000299185 C1QTNF4Q9BXJ3 329 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 116.3 ms