RNA–Protein interactions for RNA: ENST00000298355.7

TRIM9-201, Transcript of tripartite motif containing 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM9, Length 5,284 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM9-201ENST00000298355 ICOSQ9Y6W8 199 aa13.45□□□□□ -0.26
TRIM9-201ENST00000298355 NDUFA11Q86Y39 141 aa13.45□□□□□ -0.26
TRIM9-201ENST00000298355 A0A0B4J2C4 111 aa13.45□□□□□ -0.26
TRIM9-201ENST00000298355 THADAQ6YHU6 1953 aa13.45□□□□□ -0.26
TRIM9-201ENST00000298355 DKK1O94907 266 aa13.44□□□□□ -0.26
TRIM9-201ENST00000298355 DOCK10Q96BY6 2186 aa13.44□□□□□ -0.26
TRIM9-201ENST00000298355 EML6Q6ZMW3 1958 aa13.44□□□□□ -0.26
TRIM9-201ENST00000298355 MALP21145 153 aa13.44□□□□□ -0.26
TRIM9-201ENST00000298355 MINOS1Q5TGZ0 78 aa13.44□□□□□ -0.26
TRIM9-201ENST00000298355 MINOS1-NBL1R4GNA1 71 aa13.44□□□□□ -0.26
TRIM9-201ENST00000298355 TRBV6-1A0A0K0K1D8 114 aa13.44□□□□□ -0.26
TRIM9-201ENST00000298355 C5orf47Q569G3 176 aa13.44□□□□□ -0.26
TRIM9-201ENST00000298355 TRGV2A0A075B6R0 118 aa13.43□□□□□ -0.26
TRIM9-201ENST00000298355 A0A1B0GX51 115 aa13.43□□□□□ -0.26
TRIM9-201ENST00000298355 CHCHD5Q9BSY4 110 aa13.43□□□□□ -0.26
TRIM9-201ENST00000298355 AGPAT4-IT1Q9H0P7 198 aa13.43□□□□□ -0.26
TRIM9-201ENST00000298355 H3BT86 120 aa13.42□□□□□ -0.26
TRIM9-201ENST00000298355 MRAPQ8TCY5 172 aa13.42□□□□□ -0.26
TRIM9-201ENST00000298355 Q8N1Y9 231 aa13.42□□□□□ -0.26
TRIM9-201ENST00000298355 BRWD1-AS2P59051 145 aa13.42□□□□□ -0.26
TRIM9-201ENST00000298355 MLST8Q9BVC4 326 aa13.42□□□□□ -0.26
TRIM9-201ENST00000298355 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.41□□□□□ -0.26
TRIM9-201ENST00000298355 NCOA6Q14686 2063 aaPredicted RBP13.41□□□□□ -0.26
TRIM9-201ENST00000298355 ZNF672Q499Z4 452 aaPredicted RBP13.41□□□□□ -0.26
TRIM9-201ENST00000298355 ZFP2Q6ZN57 461 aa13.41□□□□□ -0.26
TRIM9-201ENST00000298355 RPL39LQ96EH5 51 aaKnown RBP13.41□□□□□ -0.26
TRIM9-201ENST00000298355 RPL36AP83881 106 aaKnown RBP13.41□□□□□ -0.26
TRIM9-201ENST00000298355 RPL36ALQ969Q0 106 aaKnown RBP13.41□□□□□ -0.26
TRIM9-201ENST00000298355 RHPN1-AS1Q9BWJ2 59 aa13.41□□□□□ -0.26
TRIM9-201ENST00000298355 GPR179Q6PRD1 2367 aa13.41□□□□□ -0.26
TRIM9-201ENST00000298355 RBAKDNA6NC62 111 aa13.41□□□□□ -0.26
TRIM9-201ENST00000298355 BAALCQ8WXS3 180 aa13.41□□□□□ -0.26
TRIM9-201ENST00000298355 JPT2Q9H910 190 aa13.41□□□□□ -0.26
TRIM9-201ENST00000298355 RIF1Q5UIP0 2472 aaKnown RBP13.4□□□□□ -0.26
TRIM9-201ENST00000298355 IGKV2D-26A0A0A0MRZ7 120 aa13.4□□□□□ -0.26
TRIM9-201ENST00000298355 IGHG3P01860 377 aa13.4□□□□□ -0.26
TRIM9-201ENST00000298355 TOMM6Q96B49 74 aa13.4□□□□□ -0.26
TRIM9-201ENST00000298355 NOTCH4Q99466 2003 aa13.4□□□□□ -0.26
TRIM9-201ENST00000298355 FOXE3Q13461 319 aa13.4□□□□□ -0.26
TRIM9-201ENST00000298355 FAM110DQ8TAY7 271 aaPredicted RBP13.4□□□□□ -0.26
TRIM9-201ENST00000298355 CD59P13987 128 aa13.4□□□□□ -0.27
TRIM9-201ENST00000298355 LOXP28300 417 aaPredicted RBP13.4□□□□□ -0.27
TRIM9-201ENST00000298355 ZNF415Q09FC8 603 aa13.4□□□□□ -0.27
TRIM9-201ENST00000298355 M0R1W7 72 aa13.39□□□□□ -0.27
TRIM9-201ENST00000298355 IGKV1-17P01599 117 aa13.39□□□□□ -0.27
TRIM9-201ENST00000298355 CDK2AP2O75956 126 aa13.39□□□□□ -0.27
TRIM9-201ENST00000298355 RBM3P98179 157 aaKnown RBP13.39□□□□□ -0.27
TRIM9-201ENST00000298355 TRAV13-2A0A0B4J235 113 aa13.39□□□□□ -0.27
TRIM9-201ENST00000298355 SPTBN1Q01082 2364 aaKnown RBP13.38□□□□□ -0.27
TRIM9-201ENST00000298355 MBD3L4A6NDZ8 208 aaPredicted RBP13.38□□□□□ -0.27
TRIM9-201ENST00000298355 MBD3L3A6NE82 208 aaPredicted RBP13.38□□□□□ -0.27
TRIM9-201ENST00000298355 MBD3L5A6NJ08 208 aaPredicted RBP13.38□□□□□ -0.27
TRIM9-201ENST00000298355 ATP5G1P05496 136 aa13.38□□□□□ -0.27
TRIM9-201ENST00000298355 MBD3L2Q8NHZ7 208 aaPredicted RBP13.38□□□□□ -0.27
TRIM9-201ENST00000298355 MRPL36Q9P0J6 103 aaKnown RBP13.38□□□□□ -0.27
TRIM9-201ENST00000298355 TINCRA0A1B0GVN0 87 aa13.38□□□□□ -0.27
TRIM9-201ENST00000298355 FAM223BA6NKX1 122 aa13.38□□□□□ -0.27
TRIM9-201ENST00000298355 RHOHQ15669 191 aa13.38□□□□□ -0.27
TRIM9-201ENST00000298355 FAM223AQ8IWN6 122 aa13.38□□□□□ -0.27
TRIM9-201ENST00000298355 INS-IGF2F8WCM5 200 aa13.38□□□□□ -0.27
TRIM9-201ENST00000298355 IGLV1-44P01699 117 aa13.38□□□□□ -0.27
TRIM9-201ENST00000298355 XGP55808 180 aa13.38□□□□□ -0.27
TRIM9-201ENST00000298355 C6orf226Q5I0X4 101 aa13.37□□□□□ -0.27
TRIM9-201ENST00000298355 I3L2K1 104 aa13.37□□□□□ -0.27
TRIM9-201ENST00000298355 TMEM243Q9BU79 118 aa13.37□□□□□ -0.27
TRIM9-201ENST00000298355 HAMPP81172 84 aa13.37□□□□□ -0.27
TRIM9-201ENST00000298355 INSL3P51460 131 aa13.36□□□□□ -0.27
TRIM9-201ENST00000298355 TMEM219Q86XT9 240 aa13.36□□□□□ -0.27
TRIM9-201ENST00000298355 RPL32P62910 135 aaKnown RBP13.36□□□□□ -0.27
TRIM9-201ENST00000298355 C11orf86A6NJI1 115 aa13.36□□□□□ -0.27
TRIM9-201ENST00000298355 TMEM258P61165 79 aa13.36□□□□□ -0.27
TRIM9-201ENST00000298355 C8orf31Q8N9H6 132 aa13.36□□□□□ -0.27
TRIM9-201ENST00000298355 UQCRQO14949 82 aa13.35□□□□□ -0.27
TRIM9-201ENST00000298355 MAPKAPK5-AS1Q8N8E1 139 aa13.35□□□□□ -0.27
TRIM9-201ENST00000298355 NUP210Q8TEM1 1887 aaPredicted RBP13.35□□□□□ -0.27
TRIM9-201ENST00000298355 IGKV3D-7A0A0C4DH55 119 aa13.35□□□□□ -0.27
TRIM9-201ENST00000298355 SPRY2O43597 315 aa13.35□□□□□ -0.27
TRIM9-201ENST00000298355 LINC00643Q86TS7 51 aa13.35□□□□□ -0.27
TRIM9-201ENST00000298355 Q71RC1 249 aaPredicted RBP13.34□□□□□ -0.27
TRIM9-201ENST00000298355 STHQ8IWL8 128 aa13.34□□□□□ -0.27
TRIM9-201ENST00000298355 PKDREJQ9NTG1 2253 aa13.34□□□□□ -0.27
TRIM9-201ENST00000298355 USMG5Q96IX5 58 aa13.34□□□□□ -0.27
TRIM9-201ENST00000298355 POLEQ07864 2286 aa13.34□□□□□ -0.27
TRIM9-201ENST00000298355 CCDC179H3BU77 68 aa13.34□□□□□ -0.27
TRIM9-201ENST00000298355 THBDP07204 575 aa13.34□□□□□ -0.27
TRIM9-201ENST00000298355 CITED2Q99967 270 aaPredicted RBP13.34□□□□□ -0.27
TRIM9-201ENST00000298355 KNCNA6PVL3 124 aa13.34□□□□□ -0.27
TRIM9-201ENST00000298355 ATP6V0E1O15342 81 aa13.34□□□□□ -0.27
TRIM9-201ENST00000298355 GNRH2O43555 120 aa13.34□□□□□ -0.27
TRIM9-201ENST00000298355 CFAP126Q5VTH2 177 aa13.34□□□□□ -0.27
TRIM9-201ENST00000298355 MRPL53Q96EL3 112 aaKnown RBP13.34□□□□□ -0.27
TRIM9-201ENST00000298355 LENEPQ9Y5L5 61 aa13.34□□□□□ -0.27
TRIM9-201ENST00000298355 IGLV3-9A0A075B6K5 115 aa13.33□□□□□ -0.27
TRIM9-201ENST00000298355 TRGV4A0A0C4DH28 118 aa13.33□□□□□ -0.27
TRIM9-201ENST00000298355 CLEC2BQ92478 149 aa13.33□□□□□ -0.27
TRIM9-201ENST00000298355 IGKV1D-37A0A075B6S9 117 aa13.33□□□□□ -0.28
TRIM9-201ENST00000298355 TEX49A0A1B0GTD5 131 aa13.33□□□□□ -0.28
TRIM9-201ENST00000298355 RNASE13Q5GAN3 156 aaKnown RBP13.33□□□□□ -0.28
TRIM9-201ENST00000298355 DAZ1Q9NQZ3 744 aaKnown RBP13.33□□□□□ -0.28
TRIM9-201ENST00000298355 E7EUB6 86 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms