RNA–Protein interactions for RNA: ENST00000292478.8

PTCD1-201, Transcript of pentatricopeptide repeat domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD1, Length 5,582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-201ENST00000292478 IGF2BP2-AS1Q96M15 143 aa10.01□□□□□ -0.81
PTCD1-201ENST00000292478 PRO1854Q9UHT4 67 aa10.01□□□□□ -0.81
PTCD1-201ENST00000292478 IGHV4-59P01825 116 aa10□□□□□ -0.81
PTCD1-201ENST00000292478 CRYGCP07315 174 aa10□□□□□ -0.81
PTCD1-201ENST00000292478 GPR179Q6PRD1 2367 aa10□□□□□ -0.81
PTCD1-201ENST00000292478 WI2-2373I1.2A0A1W2PRP0 233 aa10□□□□□ -0.81
PTCD1-201ENST00000292478 HIST1H4AP62805 103 aaKnown RBP10□□□□□ -0.81
PTCD1-201ENST00000292478 PATE2Q6UY27 113 aa10□□□□□ -0.81
PTCD1-201ENST00000292478 PPDPFLQ8WWR9 84 aa10□□□□□ -0.81
PTCD1-201ENST00000292478 HLA-DMBP28068 263 aa10□□□□□ -0.81
PTCD1-201ENST00000292478 FBXL19-AS1Q494R0 122 aa10□□□□□ -0.81
PTCD1-201ENST00000292478 C16orf54Q6UWD8 224 aa10□□□□□ -0.81
PTCD1-201ENST00000292478 COL4A3Q01955 1670 aa10□□□□□ -0.81
PTCD1-201ENST00000292478 TRAV13-2A0A0B4J235 113 aa9.99□□□□□ -0.81
PTCD1-201ENST00000292478 SOCS3O14543 225 aa9.99□□□□□ -0.81
PTCD1-201ENST00000292478 IGLV2-23P01705 113 aa9.99□□□□□ -0.81
PTCD1-201ENST00000292478 CTSGP08311 255 aa9.99□□□□□ -0.81
PTCD1-201ENST00000292478 RMI2Q96E14 147 aa9.99□□□□□ -0.81
PTCD1-201ENST00000292478 TMEM89A2RUT3 159 aa9.99□□□□□ -0.81
PTCD1-201ENST00000292478 SEM1Q6ZVN7 128 aa9.99□□□□□ -0.81
PTCD1-201ENST00000292478 TRBV6-1A0A0K0K1D8 114 aa9.99□□□□□ -0.81
PTCD1-201ENST00000292478 GAGE6Q13070 117 aa9.99□□□□□ -0.81
PTCD1-201ENST00000292478 DEFB113Q30KQ7 82 aa9.99□□□□□ -0.81
PTCD1-201ENST00000292478 SRCAPQ6ZRS2 3230 aa9.99□□□□□ -0.81
PTCD1-201ENST00000292478 IGHV4-61A0A0C4DH41 118 aa9.99□□□□□ -0.81
PTCD1-201ENST00000292478 GAGE2AQ6NT46 116 aa9.99□□□□□ -0.81
PTCD1-201ENST00000292478 ZNF625Q96I27 306 aaPredicted RBP9.99□□□□□ -0.81
PTCD1-201ENST00000292478 POLEQ07864 2286 aa9.99□□□□□ -0.81
PTCD1-201ENST00000292478 IGLV1-47P01700 117 aa9.99□□□□□ -0.81
PTCD1-201ENST00000292478 C10orf105Q8TEF2 133 aa9.99□□□□□ -0.81
PTCD1-201ENST00000292478 LINC01545Q5VT33 79 aa9.98□□□□□ -0.81
PTCD1-201ENST00000292478 Q8N9W7 124 aa9.98□□□□□ -0.81
PTCD1-201ENST00000292478 IGHV3-38A0A0C4DH36 116 aa9.98□□□□□ -0.81
PTCD1-201ENST00000292478 A0A1W2PPM0 123 aa9.98□□□□□ -0.81
PTCD1-201ENST00000292478 GNRH2O43555 120 aa9.98□□□□□ -0.81
PTCD1-201ENST00000292478 UTF1Q5T230 341 aa9.98□□□□□ -0.81
PTCD1-201ENST00000292478 ZNF48Q96MX3 618 aaPredicted RBP9.98□□□□□ -0.81
PTCD1-201ENST00000292478 PLA2G2EQ9NZK7 142 aa9.98□□□□□ -0.81
PTCD1-201ENST00000292478 DOCK9Q9BZ29 2069 aa9.98□□□□□ -0.81
PTCD1-201ENST00000292478 K7EMT4 169 aa9.98□□□□□ -0.81
PTCD1-201ENST00000292478 IGLV2-14P01704 120 aa9.98□□□□□ -0.81
PTCD1-201ENST00000292478 SPINK8P0C7L1 97 aa9.98□□□□□ -0.81
PTCD1-201ENST00000292478 ADORA2A-AS1P86434 159 aa9.98□□□□□ -0.81
PTCD1-201ENST00000292478 FAM167A-AS1Q96KT0 104 aa9.98□□□□□ -0.81
PTCD1-201ENST00000292478 BUB3O43684 328 aa9.97□□□□□ -0.81
PTCD1-201ENST00000292478 PRSS29PA6NIE9 313 aa9.97□□□□□ -0.81
PTCD1-201ENST00000292478 C5orf56Q8N8D9 126 aa9.97□□□□□ -0.81
PTCD1-201ENST00000292478 ZNF106Q9H2Y7 1883 aaKnown RBP9.97□□□□□ -0.81
PTCD1-201ENST00000292478 KIF26AQ9ULI4 1882 aaPredicted RBP9.97□□□□□ -0.81
PTCD1-201ENST00000292478 A0A1W2PNU3 283 aaPredicted RBP9.97□□□□□ -0.81
PTCD1-201ENST00000292478 CCL24O00175 119 aa9.97□□□□□ -0.81
PTCD1-201ENST00000292478 ODF3L1Q8IXM7 274 aa9.97□□□□□ -0.81
PTCD1-201ENST00000292478 DKK2Q9UBU2 259 aa9.97□□□□□ -0.81
PTCD1-201ENST00000292478 TEX22C9J3V5 150 aa9.97□□□□□ -0.81
PTCD1-201ENST00000292478 FGF6P10767 208 aa9.97□□□□□ -0.81
PTCD1-201ENST00000292478 RITA1Q96K30 269 aa9.97□□□□□ -0.81
PTCD1-201ENST00000292478 GTSF1LQ9H1H1 148 aa9.97□□□□□ -0.81
PTCD1-201ENST00000292478 C11orf1Q9H5F2 150 aa9.96□□□□□ -0.81
PTCD1-201ENST00000292478 ROS1P08922 2347 aa9.96□□□□□ -0.81
PTCD1-201ENST00000292478 KIR2DL5BA0A0G2JN68 375 aa9.96□□□□□ -0.82
PTCD1-201ENST00000292478 KIR2DL5BA0A0G2JPC4 375 aa9.96□□□□□ -0.82
PTCD1-201ENST00000292478 MED14OSP0DP75 135 aa9.96□□□□□ -0.82
PTCD1-201ENST00000292478 PFN2P35080 140 aa9.96□□□□□ -0.82
PTCD1-201ENST00000292478 KIR2DL5AQ8N109 375 aa9.96□□□□□ -0.82
PTCD1-201ENST00000292478 RIF1Q5UIP0 2472 aaKnown RBP9.96□□□□□ -0.82
PTCD1-201ENST00000292478 F6UB75 175 aa9.96□□□□□ -0.82
PTCD1-201ENST00000292478 U3KQE9 123 aa9.96□□□□□ -0.82
PTCD1-201ENST00000292478 AJUBAQ96IF1 538 aa9.96□□□□□ -0.82
PTCD1-201ENST00000292478 IGHV4-30-2A0A087WSY4 118 aa9.95□□□□□ -0.82
PTCD1-201ENST00000292478 PKDREJQ9NTG1 2253 aa9.95□□□□□ -0.82
PTCD1-201ENST00000292478 HERV-K104P63124 156 aa9.95□□□□□ -0.82
PTCD1-201ENST00000292478 C9orf47Q6ZRZ4 202 aa9.95□□□□□ -0.82
PTCD1-201ENST00000292478 NKAPP1Q8N9T2 125 aa9.95□□□□□ -0.82
PTCD1-201ENST00000292478 IGHV4-38-2P0DP08 117 aa9.95□□□□□ -0.82
PTCD1-201ENST00000292478 PRSS47A8MTI9 375 aa9.94□□□□□ -0.82
PTCD1-201ENST00000292478 K7EP13 123 aa9.94□□□□□ -0.82
PTCD1-201ENST00000292478 COL6A6A6NMZ7 2263 aa9.94□□□□□ -0.82
PTCD1-201ENST00000292478 TEX48A0A1B0GUV7 120 aa9.94□□□□□ -0.82
PTCD1-201ENST00000292478 LINC00574Q9H8X3 128 aa9.94□□□□□ -0.82
PTCD1-201ENST00000292478 ASPHD1Q5U4P2 390 aa9.94□□□□□ -0.82
PTCD1-201ENST00000292478 CADP27708 2225 aa9.94□□□□□ -0.82
PTCD1-201ENST00000292478 MORN5Q5VZ52 161 aa9.93□□□□□ -0.82
PTCD1-201ENST00000292478 C12orf74Q32Q52 190 aa9.93□□□□□ -0.82
PTCD1-201ENST00000292478 C16orf74Q96GX8 76 aa9.93□□□□□ -0.82
PTCD1-201ENST00000292478 Q8N7P7 452 aa9.93□□□□□ -0.82
PTCD1-201ENST00000292478 USF3Q68DE3 2245 aa9.93□□□□□ -0.82
PTCD1-201ENST00000292478 C9orf66Q5T8R8 295 aa9.93□□□□□ -0.82
PTCD1-201ENST00000292478 P0C879 139 aa9.92□□□□□ -0.82
PTCD1-201ENST00000292478 GPHB5Q86YW7 130 aa9.92□□□□□ -0.82
PTCD1-201ENST00000292478 TRAV25A0A0B4J276 109 aa9.92□□□□□ -0.82
PTCD1-201ENST00000292478 SUMO4Q6EEV6 95 aa9.92□□□□□ -0.82
PTCD1-201ENST00000292478 NOP10Q9NPE3 64 aaKnown RBP9.92□□□□□ -0.82
PTCD1-201ENST00000292478 OBSL1O75147 1896 aa9.92□□□□□ -0.82
PTCD1-201ENST00000292478 SIRPDQ9H106 197 aa9.92□□□□□ -0.82
PTCD1-201ENST00000292478 IFITM1P13164 125 aa9.91□□□□□ -0.82
PTCD1-201ENST00000292478 DOCK11Q5JSL3 2073 aa9.91□□□□□ -0.82
PTCD1-201ENST00000292478 SLC25A29Q8N8R3 303 aa9.91□□□□□ -0.82
PTCD1-201ENST00000292478 C2orf16Q68DN1 1984 aa9.91□□□□□ -0.82
PTCD1-201ENST00000292478 ANGP03950 147 aaKnown RBP9.91□□□□□ -0.82
PTCD1-201ENST00000292478 SH2D6Q7Z4S9 175 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms