RNA–Protein interactions for RNA: ENST00000269138.9

SS18-202, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-202ENST00000269138 MLST8Q9BVC4 326 aa9.06□□□□□ -0.96
SS18-202ENST00000269138 TEX48A0A1B0GUV7 120 aa9.05□□□□□ -0.96
SS18-202ENST00000269138 FABP5P3A8MUU1 101 aa9.05□□□□□ -0.96
SS18-202ENST00000269138 SH2D1AO60880 128 aa9.05□□□□□ -0.96
SS18-202ENST00000269138 TYMSP04818 313 aa9.05□□□□□ -0.96
SS18-202ENST00000269138 TCL1AP56279 114 aa9.05□□□□□ -0.96
SS18-202ENST00000269138 IFITM2Q01629 132 aa9.05□□□□□ -0.96
SS18-202ENST00000269138 DAZ2Q13117 558 aaKnown RBP9.05□□□□□ -0.96
SS18-202ENST00000269138 CENPWQ5EE01 88 aa9.05□□□□□ -0.96
SS18-202ENST00000269138 FAM210AQ96ND0 272 aa9.05□□□□□ -0.96
SS18-202ENST00000269138 IGKV3D-20A0A0C4DH25 116 aa9.05□□□□□ -0.96
SS18-202ENST00000269138 IGHV3-16A0A0C4DH30 117 aa9.05□□□□□ -0.96
SS18-202ENST00000269138 GAGE12BA1L429 117 aa9.05□□□□□ -0.96
SS18-202ENST00000269138 GAGE7O76087 117 aa9.05□□□□□ -0.96
SS18-202ENST00000269138 IGLV2-8P01709 118 aa9.05□□□□□ -0.96
SS18-202ENST00000269138 GAGE12FP0CL80 117 aa9.05□□□□□ -0.96
SS18-202ENST00000269138 GAGE12GP0CL81 117 aa9.05□□□□□ -0.96
SS18-202ENST00000269138 GAGE12IP0CL82 117 aa9.05□□□□□ -0.96
SS18-202ENST00000269138 ZNF674Q2M3X9 581 aa9.05□□□□□ -0.96
SS18-202ENST00000269138 IBA57Q5T440 356 aaKnown RBP9.05□□□□□ -0.96
SS18-202ENST00000269138 Q6ZTI0 123 aa9.05□□□□□ -0.96
SS18-202ENST00000269138 EIF5A2Q9GZV4 153 aaKnown RBP9.05□□□□□ -0.96
SS18-202ENST00000269138 SDF2L1Q9HCN8 221 aa9.05□□□□□ -0.96
SS18-202ENST00000269138 CSMD3Q7Z407 3707 aa9.05□□□□□ -0.96
SS18-202ENST00000269138 TRBV20OR9-2A0A075B6H5 130 aa9.04□□□□□ -0.96
SS18-202ENST00000269138 TRGV11A0A075B6L2 103 aa9.04□□□□□ -0.96
SS18-202ENST00000269138 TRAV10A0A0B4J240 114 aa9.04□□□□□ -0.96
SS18-202ENST00000269138 PGPEP1LA6NFU8 196 aa9.04□□□□□ -0.96
SS18-202ENST00000269138 HTN3P15516 51 aa9.04□□□□□ -0.96
SS18-202ENST00000269138 ZNF415Q09FC8 603 aa9.04□□□□□ -0.96
SS18-202ENST00000269138 FAM162BQ5T6X4 162 aa9.04□□□□□ -0.96
SS18-202ENST00000269138 LINC00612Q8N6U2 182 aa9.04□□□□□ -0.96
SS18-202ENST00000269138 KCNS1Q96KK3 526 aa9.04□□□□□ -0.96
SS18-202ENST00000269138 MRPL16Q9NX20 251 aaKnown RBP9.04□□□□□ -0.96
SS18-202ENST00000269138 DEFB131BA0A096LNP1 70 aa9.03□□□□□ -0.96
SS18-202ENST00000269138 TRGV1A0A0A0MS02 117 aa9.03□□□□□ -0.96
SS18-202ENST00000269138 NUPR2A6NF83 97 aa9.03□□□□□ -0.96
SS18-202ENST00000269138 M0R036 132 aa9.03□□□□□ -0.96
SS18-202ENST00000269138 SPINK4O60575 86 aa9.03□□□□□ -0.96
SS18-202ENST00000269138 ORM1P02763 201 aa9.03□□□□□ -0.96
SS18-202ENST00000269138 SRSF3P84103 164 aaKnown RBP9.03□□□□□ -0.96
SS18-202ENST00000269138 ZNF575Q86XF7 245 aa9.03□□□□□ -0.96
SS18-202ENST00000269138 STARD9Q9P2P6 4700 aa9.03□□□□□ -0.96
SS18-202ENST00000269138 KRBOX1C9JBD0 128 aa9.02□□□□□ -0.97
SS18-202ENST00000269138 C9JQL5 133 aa9.02□□□□□ -0.97
SS18-202ENST00000269138 TMEM250H0YL14 139 aa9.02□□□□□ -0.97
SS18-202ENST00000269138 SRP19P09132 144 aaKnown RBP9.02□□□□□ -0.97
SS18-202ENST00000269138 GNG4P50150 75 aa9.02□□□□□ -0.97
SS18-202ENST00000269138 CEBPGP53567 150 aa9.02□□□□□ -0.97
SS18-202ENST00000269138 PRR27Q6MZM9 219 aa9.02□□□□□ -0.97
SS18-202ENST00000269138 PARLQ9H300 379 aa9.02□□□□□ -0.97
SS18-202ENST00000269138 TMSB15BA0A087X1C1 80 aa9.01□□□□□ -0.97
SS18-202ENST00000269138 GRIFINA4D1Z8 144 aa9.01□□□□□ -0.97
SS18-202ENST00000269138 B4DEV8 164 aa9.01□□□□□ -0.97
SS18-202ENST00000269138 MGST1P10620 155 aaKnown RBP9.01□□□□□ -0.97
SS18-202ENST00000269138 IGLL5B9A064 214 aa9□□□□□ -0.97
SS18-202ENST00000269138 RNASE3P12724 160 aaKnown RBP9□□□□□ -0.97
SS18-202ENST00000269138 RPL19P84098 196 aaKnown RBP9□□□□□ -0.97
SS18-202ENST00000269138 LINC01559Q495D7 138 aa9□□□□□ -0.97
SS18-202ENST00000269138 SPXQ9BT56 116 aa9□□□□□ -0.97
SS18-202ENST00000269138 KLK5Q9Y337 293 aaPredicted RBP9□□□□□ -0.97
SS18-202ENST00000269138 TENM2Q9NT68 2774 aa9□□□□□ -0.97
SS18-202ENST00000269138 TRGV2A0A075B6R0 118 aa9□□□□□ -0.97
SS18-202ENST00000269138 ATP5G1P05496 136 aa9□□□□□ -0.97
SS18-202ENST00000269138 RAB14P61106 215 aa9□□□□□ -0.97
SS18-202ENST00000269138 OR5I1Q13606 314 aa9□□□□□ -0.97
SS18-202ENST00000269138 LGALS9BQ3B8N2 356 aa9□□□□□ -0.97
SS18-202ENST00000269138 OCC1Q8TAD7 63 aa9□□□□□ -0.97
SS18-202ENST00000269138 C9orf85Q96MD7 179 aa9□□□□□ -0.97
SS18-202ENST00000269138 DYNC2H1Q8NCM8 4307 aaKnown RBP8.99□□□□□ -0.97
SS18-202ENST00000269138 C9JCJ5 164 aa8.99□□□□□ -0.97
SS18-202ENST00000269138 F5H768 121 aa8.99□□□□□ -0.97
SS18-202ENST00000269138 M0R2P5 195 aa8.99□□□□□ -0.97
SS18-202ENST00000269138 NDUFS6O75380 124 aaKnown RBP8.99□□□□□ -0.97
SS18-202ENST00000269138 ASIPP42127 132 aa8.99□□□□□ -0.97
SS18-202ENST00000269138 IGHV4-4A0A075B6R2 117 aa8.98□□□□□ -0.97
SS18-202ENST00000269138 K7EN84 100 aa8.98□□□□□ -0.97
SS18-202ENST00000269138 IGHV3-53P01767 116 aa8.98□□□□□ -0.97
SS18-202ENST00000269138 HOXA5P20719 270 aa8.98□□□□□ -0.97
SS18-202ENST00000269138 S100A4P26447 101 aaKnown RBP8.98□□□□□ -0.97
SS18-202ENST00000269138 CLLU1Q5K131 121 aa8.98□□□□□ -0.97
SS18-202ENST00000269138 RASL10AQ92737 203 aa8.98□□□□□ -0.97
SS18-202ENST00000269138 SMIM12Q96EX1 92 aa8.98□□□□□ -0.97
SS18-202ENST00000269138 C19orf71A6NCJ1 209 aa8.97□□□□□ -0.97
SS18-202ENST00000269138 H3BVH4 76 aa8.97□□□□□ -0.97
SS18-202ENST00000269138 ARMS2P0C7Q2 107 aa8.97□□□□□ -0.97
SS18-202ENST00000269138 PEA15Q15121 130 aa8.97□□□□□ -0.97
SS18-202ENST00000269138 DNLZQ5SXM8 178 aa8.97□□□□□ -0.97
SS18-202ENST00000269138 TMEM88Q6PEY1 159 aa8.97□□□□□ -0.97
SS18-202ENST00000269138 POM121L12Q8N7R1 296 aa8.97□□□□□ -0.97
SS18-202ENST00000269138 C18orf15Q96N68 181 aa8.97□□□□□ -0.97
SS18-202ENST00000269138 SMIM7Q9BQ49 75 aa8.97□□□□□ -0.97
SS18-202ENST00000269138 APLNQ9ULZ1 77 aa8.97□□□□□ -0.97
SS18-202ENST00000269138 ZNF727A8MUV8 499 aa8.96□□□□□ -0.97
SS18-202ENST00000269138 SFTA3P0C7M3 94 aa8.96□□□□□ -0.97
SS18-202ENST00000269138 DAZAP1Q96EP5 407 aaKnown RBP8.96□□□□□ -0.97
SS18-202ENST00000269138 IL36BQ9NZH7 164 aa8.96□□□□□ -0.97
SS18-202ENST00000269138 GZMBP10144 247 aa8.95□□□□□ -0.98
SS18-202ENST00000269138 ZNF876PQ49A33 203 aa8.95□□□□□ -0.98
SS18-202ENST00000269138 NUDT10Q8NFP7 164 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 204.9 ms