RNA–Protein interactions for RNA: ENST00000244728.9

COL21A1-201, Transcript of collagen type XXI alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL21A1, Length 4,339 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-201ENST00000244728 IGHV1-69DA0A0B4J2H0 117 aa7.29□□□□□ -1.24
COL21A1-201ENST00000244728 A0A0U1RRA0 63 aa7.29□□□□□ -1.24
COL21A1-201ENST00000244728 H3BMG7 143 aa7.29□□□□□ -1.24
COL21A1-201ENST00000244728 IGHV1-69P01742 117 aa7.29□□□□□ -1.24
COL21A1-201ENST00000244728 HLA-DMBP28068 263 aa7.29□□□□□ -1.24
COL21A1-201ENST00000244728 STHQ8IWL8 128 aa7.29□□□□□ -1.24
COL21A1-201ENST00000244728 TOMM7Q9P0U1 55 aa7.29□□□□□ -1.24
COL21A1-201ENST00000244728 KAAG1Q9UBP8 84 aa7.29□□□□□ -1.24
COL21A1-201ENST00000244728 H3BRN7 92 aa7.29□□□□□ -1.24
COL21A1-201ENST00000244728 NDUFS8O00217 210 aa7.29□□□□□ -1.24
COL21A1-201ENST00000244728 AZU1P20160 251 aa7.29□□□□□ -1.24
COL21A1-201ENST00000244728 CR1LQ2VPA4 569 aa7.29□□□□□ -1.24
COL21A1-201ENST00000244728 TTC32Q5I0X7 151 aa7.29□□□□□ -1.24
COL21A1-201ENST00000244728 LINC00311Q8N616 119 aa7.29□□□□□ -1.24
COL21A1-201ENST00000244728 KLHL30-AS1Q8NEE0 82 aa7.29□□□□□ -1.24
COL21A1-201ENST00000244728 TMEM190Q8WZ59 177 aa7.29□□□□□ -1.24
COL21A1-201ENST00000244728 SPATA12Q7Z6I5 190 aa7.29□□□□□ -1.24
COL21A1-201ENST00000244728 MRPL35Q9NZE8 188 aaKnown RBP7.29□□□□□ -1.24
COL21A1-201ENST00000244728 MYO15AQ9UKN7 3530 aa7.28□□□□□ -1.24
COL21A1-201ENST00000244728 IGHV3-64A0A075B6Q5 118 aa7.28□□□□□ -1.24
COL21A1-201ENST00000244728 IGKV1D-37A0A075B6S9 117 aa7.28□□□□□ -1.24
COL21A1-201ENST00000244728 C19orf71A6NCJ1 209 aa7.28□□□□□ -1.24
COL21A1-201ENST00000244728 PLNP26678 52 aa7.28□□□□□ -1.24
COL21A1-201ENST00000244728 VGLL1Q99990 258 aa7.28□□□□□ -1.24
COL21A1-201ENST00000244728 A0A087WWL8 130 aa7.28□□□□□ -1.24
COL21A1-201ENST00000244728 K7EMI3 77 aa7.28□□□□□ -1.24
COL21A1-201ENST00000244728 SIVA1O15304 175 aa7.28□□□□□ -1.24
COL21A1-201ENST00000244728 SPRY2O43597 315 aa7.28□□□□□ -1.24
COL21A1-201ENST00000244728 CGB3P0DN86 165 aa7.28□□□□□ -1.24
COL21A1-201ENST00000244728 CGB7P0DN87 165 aa7.28□□□□□ -1.24
COL21A1-201ENST00000244728 MEIG1Q5JSS6 88 aa7.28□□□□□ -1.24
COL21A1-201ENST00000244728 ZNF491Q8N8L2 437 aa7.28□□□□□ -1.24
COL21A1-201ENST00000244728 PEMTQ9UBM1 199 aa7.28□□□□□ -1.24
COL21A1-201ENST00000244728 TRBV7-1A0A0A6YYK4 115 aa7.28□□□□□ -1.24
COL21A1-201ENST00000244728 IGHV3-53P01767 116 aa7.28□□□□□ -1.24
COL21A1-201ENST00000244728 ADORA2A-AS1P86434 159 aa7.28□□□□□ -1.24
COL21A1-201ENST00000244728 H7C1H1 209 aa7.28□□□□□ -1.24
COL21A1-201ENST00000244728 LOXL1Q08397 574 aaPredicted RBP7.28□□□□□ -1.24
COL21A1-201ENST00000244728 TRAV8-2A0A0B4J237 113 aa7.27□□□□□ -1.25
COL21A1-201ENST00000244728 IGHV4-61A0A0C4DH41 118 aa7.27□□□□□ -1.25
COL21A1-201ENST00000244728 GAGE12HA6NDE8 117 aa7.27□□□□□ -1.25
COL21A1-201ENST00000244728 IGKV1-17P01599 117 aa7.27□□□□□ -1.25
COL21A1-201ENST00000244728 COX6CP09669 75 aa7.27□□□□□ -1.25
COL21A1-201ENST00000244728 EGR2P11161 476 aaPredicted RBP7.27□□□□□ -1.25
COL21A1-201ENST00000244728 TMEM95Q3KNT9 176 aa7.27□□□□□ -1.25
COL21A1-201ENST00000244728 WDFY4Q6ZS81 3184 aa7.27□□□□□ -1.25
COL21A1-201ENST00000244728 TRAV26-2A0A0B4J265 109 aa7.27□□□□□ -1.25
COL21A1-201ENST00000244728 KNCNA6PVL3 124 aa7.27□□□□□ -1.25
COL21A1-201ENST00000244728 OVOL1O14753 267 aa7.27□□□□□ -1.25
COL21A1-201ENST00000244728 SNCGO76070 127 aa7.27□□□□□ -1.25
COL21A1-201ENST00000244728 LINC01356Q8N9X3 169 aa7.27□□□□□ -1.25
COL21A1-201ENST00000244728 DLX4Q92988 240 aaPredicted RBP7.27□□□□□ -1.25
COL21A1-201ENST00000244728 Q96MF0 132 aa7.27□□□□□ -1.25
COL21A1-201ENST00000244728 A8MWV9 139 aa7.27□□□□□ -1.25
COL21A1-201ENST00000244728 GATA1P15976 413 aaPredicted RBP7.27□□□□□ -1.25
COL21A1-201ENST00000244728 FXYD2P54710 66 aa7.27□□□□□ -1.25
COL21A1-201ENST00000244728 DSCR9P59020 149 aa7.27□□□□□ -1.25
COL21A1-201ENST00000244728 PPP1R17O96001 155 aa7.26□□□□□ -1.25
COL21A1-201ENST00000244728 RPL35AP18077 110 aaKnown RBP7.26□□□□□ -1.25
COL21A1-201ENST00000244728 DEFB131AP59861 70 aa7.26□□□□□ -1.25
COL21A1-201ENST00000244728 BOD1L2Q8IYS8 172 aa7.26□□□□□ -1.25
COL21A1-201ENST00000244728 MLST8Q9BVC4 326 aa7.26□□□□□ -1.25
COL21A1-201ENST00000244728 MSRB1Q9NZV6 116 aa7.26□□□□□ -1.25
COL21A1-201ENST00000244728 CEND1Q8N111 149 aa7.26□□□□□ -1.25
COL21A1-201ENST00000244728 LINC00477Q96M19 166 aa7.26□□□□□ -1.25
COL21A1-201ENST00000244728 TRBV25-1A0A075B6N4 114 aa7.26□□□□□ -1.25
COL21A1-201ENST00000244728 F8W1H4 67 aa7.26□□□□□ -1.25
COL21A1-201ENST00000244728 SPINK8P0C7L1 97 aa7.26□□□□□ -1.25
COL21A1-201ENST00000244728 BLCAPP62952 87 aa7.26□□□□□ -1.25
COL21A1-201ENST00000244728 C9orf139Q6ZV77 190 aa7.26□□□□□ -1.25
COL21A1-201ENST00000244728 SH2D6Q7Z4S9 175 aa7.26□□□□□ -1.25
COL21A1-201ENST00000244728 Q8N8P6 123 aa7.26□□□□□ -1.25
COL21A1-201ENST00000244728 MRAP2Q96G30 205 aa7.26□□□□□ -1.25
COL21A1-201ENST00000244728 ANAPC13Q9BS18 74 aa7.26□□□□□ -1.25
COL21A1-201ENST00000244728 DAZ1Q9NQZ3 744 aaKnown RBP7.26□□□□□ -1.25
COL21A1-201ENST00000244728 SPINK13Q1W4C9 94 aa7.25□□□□□ -1.25
COL21A1-201ENST00000244728 DTX2Q86UW9 622 aa7.25□□□□□ -1.25
COL21A1-201ENST00000244728 FAM110DQ8TAY7 271 aaPredicted RBP7.25□□□□□ -1.25
COL21A1-201ENST00000244728 F6UB75 175 aa7.25□□□□□ -1.25
COL21A1-201ENST00000244728 ZNF876PQ49A33 203 aa7.25□□□□□ -1.25
COL21A1-201ENST00000244728 C1orf122Q6ZSJ8 110 aa7.25□□□□□ -1.25
COL21A1-201ENST00000244728 VCX2Q9H322 139 aa7.25□□□□□ -1.25
COL21A1-201ENST00000244728 VWC2LB2RUY7 222 aa7.25□□□□□ -1.25
COL21A1-201ENST00000244728 DUSP14O95147 198 aaKnown RBP7.25□□□□□ -1.25
COL21A1-201ENST00000244728 RNASE1P07998 156 aaKnown RBP7.25□□□□□ -1.25
COL21A1-201ENST00000244728 SLC25A16P16260 332 aa7.25□□□□□ -1.25
COL21A1-201ENST00000244728 USMG5Q96IX5 58 aa7.25□□□□□ -1.25
COL21A1-201ENST00000244728 SRSF8Q9BRL6 282 aaKnown RBP7.25□□□□□ -1.25
COL21A1-201ENST00000244728 TRAV12-2A0A075B6T6 113 aa7.25□□□□□ -1.25
COL21A1-201ENST00000244728 TRAV2A0A0B4J234 112 aa7.25□□□□□ -1.25
COL21A1-201ENST00000244728 IGLV2-23P01705 113 aa7.25□□□□□ -1.25
COL21A1-201ENST00000244728 IGHV4-59P01825 116 aa7.25□□□□□ -1.25
COL21A1-201ENST00000244728 PAPPA-AS1Q5QFB9 102 aa7.25□□□□□ -1.25
COL21A1-201ENST00000244728 IGF2-ASQ6U949 168 aa7.25□□□□□ -1.25
COL21A1-201ENST00000244728 IGHV4-30-2A0A087WSY4 118 aa7.24□□□□□ -1.25
COL21A1-201ENST00000244728 LINC01549A6NIU2 74 aa7.24□□□□□ -1.25
COL21A1-201ENST00000244728 C12orf74Q32Q52 190 aa7.24□□□□□ -1.25
COL21A1-201ENST00000244728 INS-IGF2F8WCM5 200 aa7.24□□□□□ -1.25
COL21A1-201ENST00000244728 G3V4G9 280 aa7.24□□□□□ -1.25
COL21A1-201ENST00000244728 IGHV4-38-2P0DP08 117 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms