RNA–Protein interactions for RNA: ENST00000218364.4

HTATSF1-201, Transcript of HIV-1 Tat specific factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HTATSF1, Length 2,775 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTATSF1-201ENST00000218364 C16orf92Q96LL3 132 aa16.87■□□□□ 0.29
HTATSF1-201ENST00000218364 H7C1H1 209 aa16.86■□□□□ 0.29
HTATSF1-201ENST00000218364 C5orf56Q8N8D9 126 aa16.86■□□□□ 0.29
HTATSF1-201ENST00000218364 IGLL5B9A064 214 aa16.86■□□□□ 0.29
HTATSF1-201ENST00000218364 F8VRH5 84 aa16.86■□□□□ 0.29
HTATSF1-201ENST00000218364 ABCA4P78363 2273 aa16.85■□□□□ 0.29
HTATSF1-201ENST00000218364 LINC01619G3V211 115 aa16.85■□□□□ 0.29
HTATSF1-201ENST00000218364 SLC25A16P16260 332 aa16.85■□□□□ 0.29
HTATSF1-201ENST00000218364 ORMDL2Q53FV1 153 aa16.85■□□□□ 0.29
HTATSF1-201ENST00000218364 C20orf173Q96LM9 149 aa16.85■□□□□ 0.29
HTATSF1-201ENST00000218364 LRBAP50851 2863 aa16.85■□□□□ 0.29
HTATSF1-201ENST00000218364 A0A1W2PPR1 153 aa16.84■□□□□ 0.29
HTATSF1-201ENST00000218364 C19orf54Q5BKX5 351 aa16.84■□□□□ 0.29
HTATSF1-201ENST00000218364 TOMM6Q96B49 74 aa16.84■□□□□ 0.29
HTATSF1-201ENST00000218364 LINC00477Q96M19 166 aa16.84■□□□□ 0.29
HTATSF1-201ENST00000218364 C20orf78Q9BR46 151 aa16.84■□□□□ 0.29
HTATSF1-201ENST00000218364 K7EMI3 77 aa16.83■□□□□ 0.29
HTATSF1-201ENST00000218364 KLRB1Q12918 225 aa16.83■□□□□ 0.29
HTATSF1-201ENST00000218364 C12orf74Q32Q52 190 aa16.83■□□□□ 0.29
HTATSF1-201ENST00000218364 FOXI2Q6ZQN5 318 aa16.83■□□□□ 0.28
HTATSF1-201ENST00000218364 FAM223BA6NKX1 122 aa16.83■□□□□ 0.28
HTATSF1-201ENST00000218364 NPFFO15130 113 aa16.83■□□□□ 0.28
HTATSF1-201ENST00000218364 FAM223AQ8IWN6 122 aa16.83■□□□□ 0.28
HTATSF1-201ENST00000218364 ZFAND2AQ8N6M9 145 aa16.83■□□□□ 0.28
HTATSF1-201ENST00000218364 TLN1Q9Y490 2541 aaKnown RBP16.82■□□□□ 0.28
HTATSF1-201ENST00000218364 TRBV7-3A0A075B6L6 115 aa16.82■□□□□ 0.28
HTATSF1-201ENST00000218364 IGF1P05019 195 aa16.82■□□□□ 0.28
HTATSF1-201ENST00000218364 SUMO2P61956 95 aaKnown RBP16.82■□□□□ 0.28
HTATSF1-201ENST00000218364 LY6DQ14210 128 aa16.82■□□□□ 0.28
HTATSF1-201ENST00000218364 RASL10AQ92737 203 aa16.82■□□□□ 0.28
HTATSF1-201ENST00000218364 CSMD1Q96PZ7 3565 aa16.82■□□□□ 0.28
HTATSF1-201ENST00000218364 NEXN-AS1Q8NBZ9 246 aa16.82■□□□□ 0.28
HTATSF1-201ENST00000218364 TEX48A0A1B0GUV7 120 aa16.81■□□□□ 0.28
HTATSF1-201ENST00000218364 CRIP2P52943 208 aaPredicted RBP16.81■□□□□ 0.28
HTATSF1-201ENST00000218364 LMO4P61968 165 aa16.81■□□□□ 0.28
HTATSF1-201ENST00000218364 CHTOPQ9Y3Y2 248 aaKnown RBP16.81■□□□□ 0.28
HTATSF1-201ENST00000218364 ACACBO00763 2458 aa16.81■□□□□ 0.28
HTATSF1-201ENST00000218364 ITPR1Q14643 2758 aa16.81■□□□□ 0.28
HTATSF1-201ENST00000218364 GPHB5Q86YW7 130 aa16.81■□□□□ 0.28
HTATSF1-201ENST00000218364 ZNF479Q96JC4 524 aa16.81■□□□□ 0.28
HTATSF1-201ENST00000218364 SCGB3A1Q96QR1 104 aa16.81■□□□□ 0.28
HTATSF1-201ENST00000218364 DPH3P1Q9H4G8 78 aa16.81■□□□□ 0.28
HTATSF1-201ENST00000218364 TRAV41A0A0B4J266 112 aa16.8■□□□□ 0.28
HTATSF1-201ENST00000218364 TRAV21A0A0B4J279 112 aa16.8■□□□□ 0.28
HTATSF1-201ENST00000218364 F8W1H4 67 aa16.8■□□□□ 0.28
HTATSF1-201ENST00000218364 RPL24P83731 157 aaKnown RBP16.8■□□□□ 0.28
HTATSF1-201ENST00000218364 HIST1H4GQ99525 98 aa16.8■□□□□ 0.28
HTATSF1-201ENST00000218364 A0A1B0GWB2 263 aa16.8■□□□□ 0.28
HTATSF1-201ENST00000218364 OVOL1O14753 267 aa16.8■□□□□ 0.28
HTATSF1-201ENST00000218364 TMEM238C9JI98 176 aa16.79■□□□□ 0.28
HTATSF1-201ENST00000218364 SOCS3O14543 225 aa16.79■□□□□ 0.28
HTATSF1-201ENST00000218364 MED14OSP0DP75 135 aa16.79■□□□□ 0.28
HTATSF1-201ENST00000218364 MYMXA0A1B0GTQ4 84 aa16.79■□□□□ 0.28
HTATSF1-201ENST00000218364 M0R381 172 aa16.79■□□□□ 0.28
HTATSF1-201ENST00000218364 PKD1L2Q7Z442 2459 aa16.79■□□□□ 0.28
HTATSF1-201ENST00000218364 OR11H12B2RN74 326 aa16.78■□□□□ 0.28
HTATSF1-201ENST00000218364 OR11H1Q8NG94 326 aa16.78■□□□□ 0.28
HTATSF1-201ENST00000218364 OR11H2Q8NH07 326 aa16.78■□□□□ 0.28
HTATSF1-201ENST00000218364 RNF223E7ERA6 249 aa16.78■□□□□ 0.28
HTATSF1-201ENST00000218364 ARL3P36405 182 aa16.78■□□□□ 0.28
HTATSF1-201ENST00000218364 OR10J6PQ8NGY7 276 aa16.78■□□□□ 0.28
HTATSF1-201ENST00000218364 MOB4Q9Y3A3 225 aa16.78■□□□□ 0.28
HTATSF1-201ENST00000218364 ASIPP42127 132 aa16.77■□□□□ 0.28
HTATSF1-201ENST00000218364 FAM19A4Q96LR4 140 aa16.77■□□□□ 0.28
HTATSF1-201ENST00000218364 HRNRQ86YZ3 2850 aaPredicted RBP16.77■□□□□ 0.28
HTATSF1-201ENST00000218364 RRN3P1Q2M238 152 aa16.76■□□□□ 0.27
HTATSF1-201ENST00000218364 RPL39LQ96EH5 51 aaKnown RBP16.76■□□□□ 0.27
HTATSF1-201ENST00000218364 WNK2Q9Y3S1 2297 aa16.76■□□□□ 0.27
HTATSF1-201ENST00000218364 NDUFA4O00483 81 aa16.76■□□□□ 0.27
HTATSF1-201ENST00000218364 UNQ9165/PRO28630Q6UXU0 137 aa16.76■□□□□ 0.27
HTATSF1-201ENST00000218364 APRG1Q8IVJ8 170 aa16.76■□□□□ 0.27
HTATSF1-201ENST00000218364 KLK15Q9H2R5 256 aa16.76■□□□□ 0.27
HTATSF1-201ENST00000218364 SPANXB1Q9NS25 103 aaPredicted RBP16.76■□□□□ 0.27
HTATSF1-201ENST00000218364 J3KRW8 73 aa16.75■□□□□ 0.27
HTATSF1-201ENST00000218364 S100A4P26447 101 aaKnown RBP16.75■□□□□ 0.27
HTATSF1-201ENST00000218364 ANXA2RQ3ZCQ2 193 aa16.75■□□□□ 0.27
HTATSF1-201ENST00000218364 TMEM219Q86XT9 240 aa16.75■□□□□ 0.27
HTATSF1-201ENST00000218364 C14orf178Q8N769 122 aaPredicted RBP16.75■□□□□ 0.27
HTATSF1-201ENST00000218364 BAALCQ8WXS3 180 aa16.75■□□□□ 0.27
HTATSF1-201ENST00000218364 PHLDA3Q9Y5J5 127 aa16.75■□□□□ 0.27
HTATSF1-201ENST00000218364 C2orf66Q6UXQ4 117 aa16.75■□□□□ 0.27
HTATSF1-201ENST00000218364 BPESC1Q9GZL8 116 aa16.75■□□□□ 0.27
HTATSF1-201ENST00000218364 ATRXP46100 2492 aa16.75■□□□□ 0.27
HTATSF1-201ENST00000218364 SPTA1P02549 2419 aa16.75■□□□□ 0.27
HTATSF1-201ENST00000218364 WFDC2Q14508 124 aa16.74■□□□□ 0.27
HTATSF1-201ENST00000218364 SPOCK3Q9BQ16 436 aa16.74■□□□□ 0.27
HTATSF1-201ENST00000218364 POM121L12Q8N7R1 296 aa16.74■□□□□ 0.27
HTATSF1-201ENST00000218364 SPRY2O43597 315 aa16.73■□□□□ 0.27
HTATSF1-201ENST00000218364 LGALS1P09382 135 aaKnown RBP16.73■□□□□ 0.27
HTATSF1-201ENST00000218364 LINC00527Q9UJ94 153 aa16.73■□□□□ 0.27
HTATSF1-201ENST00000218364 PPP1R17O96001 155 aa16.73■□□□□ 0.27
HTATSF1-201ENST00000218364 TRBV7-9A0A0J9YWB2 115 aa16.72■□□□□ 0.27
HTATSF1-201ENST00000218364 UBTD1Q9HAC8 227 aa16.72■□□□□ 0.27
HTATSF1-201ENST00000218364 TRBV12-3P01733 135 aa16.72■□□□□ 0.27
HTATSF1-201ENST00000218364 PRSS29PA6NIE9 313 aa16.72■□□□□ 0.27
HTATSF1-201ENST00000218364 H3BMG7 143 aa16.72■□□□□ 0.27
HTATSF1-201ENST00000218364 BRI3O95415 125 aa16.71■□□□□ 0.27
HTATSF1-201ENST00000218364 RNASE3P12724 160 aaKnown RBP16.71■□□□□ 0.26
HTATSF1-201ENST00000218364 NXPH4O95158 308 aa16.7■□□□□ 0.26
HTATSF1-201ENST00000218364 MGPP08493 103 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms