RNA–Protein interactions for RNA: ENSMUST00000041643.3

Pcif1-201, Transcript of Phosphorylated CTD-interacting factor 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcif1, Length 5,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcif1-201ENSMUST00000041643 Igkv14-100A0A0G2JG36 117 aa9.9□□□□□ -0.83
Pcif1-201ENSMUST00000041643 1700001C19RikQ8K168 210 aa9.9□□□□□ -0.83
Pcif1-201ENSMUST00000041643 Cyb5r3Q9DCN2 301 aaKnown RBP9.9□□□□□ -0.83
Pcif1-201ENSMUST00000041643 Adam6aB2RSY5 754 aa9.9□□□□□ -0.83
Pcif1-201ENSMUST00000041643 Pate4Q09098 99 aa9.9□□□□□ -0.83
Pcif1-201ENSMUST00000041643 2810408A11RikQ6NSU2 435 aa9.9□□□□□ -0.83
Pcif1-201ENSMUST00000041643 Samt1A2BED8 237 aa9.89□□□□□ -0.83
Pcif1-201ENSMUST00000041643 Wipf3P0C7L0 485 aa9.89□□□□□ -0.83
Pcif1-201ENSMUST00000041643 Slc17a2Q5SZA1 478 aa9.89□□□□□ -0.83
Pcif1-201ENSMUST00000041643 Fbxo24Q9D417 589 aa9.89□□□□□ -0.83
Pcif1-201ENSMUST00000041643 Suclg1Q9WUM5 346 aaKnown RBP9.89□□□□□ -0.83
Pcif1-201ENSMUST00000041643 G530012D18RikJ3QK25 139 aa9.89□□□□□ -0.83
Pcif1-201ENSMUST00000041643 Iglc3P01845 104 aa9.89□□□□□ -0.83
Pcif1-201ENSMUST00000041643 EppinQ9DA01 134 aa9.89□□□□□ -0.83
Pcif1-201ENSMUST00000041643 Trav7n-5A0A075B604 112 aa9.89□□□□□ -0.83
Pcif1-201ENSMUST00000041643 AU041133A0A0J9YVH3 498 aa9.89□□□□□ -0.83
Pcif1-201ENSMUST00000041643 AsmtD3KU66 387 aa9.89□□□□□ -0.83
Pcif1-201ENSMUST00000041643 Adat3Q6PAT0 349 aa9.89□□□□□ -0.83
Pcif1-201ENSMUST00000041643 Gm9945Q8BNZ3 91 aa9.89□□□□□ -0.83
Pcif1-201ENSMUST00000041643 B3gnt9Q8VI16 399 aa9.89□□□□□ -0.83
Pcif1-201ENSMUST00000041643 Atp23Q9CWQ3 201 aa9.89□□□□□ -0.83
Pcif1-201ENSMUST00000041643 Gm37797A0A1D5RLC8 261 aa9.88□□□□□ -0.83
Pcif1-201ENSMUST00000041643 Aadacl4B1AVU5 407 aa9.88□□□□□ -0.83
Pcif1-201ENSMUST00000041643 Q497N7 227 aa9.88□□□□□ -0.83
Pcif1-201ENSMUST00000041643 Cldn23Q9D7D7 296 aa9.88□□□□□ -0.83
Pcif1-201ENSMUST00000041643 Hils1Q9QYL0 170 aa9.88□□□□□ -0.83
Pcif1-201ENSMUST00000041643 A630076J17RikJ3QQ32 107 aa9.88□□□□□ -0.83
Pcif1-201ENSMUST00000041643 Gstp1P19157 210 aa9.88□□□□□ -0.83
Pcif1-201ENSMUST00000041643 Olfr1537P34983 314 aa9.88□□□□□ -0.83
Pcif1-201ENSMUST00000041643 Adra2aQ01338 450 aa9.88□□□□□ -0.83
Pcif1-201ENSMUST00000041643 Srsf7Q8BL97 267 aaKnown RBP9.88□□□□□ -0.83
Pcif1-201ENSMUST00000041643 PpifQ99KR7 206 aaKnown RBP9.88□□□□□ -0.83
Pcif1-201ENSMUST00000041643 Olfr961Q9EQ84 314 aa9.88□□□□□ -0.83
Pcif1-201ENSMUST00000041643 Gm6525A0A0A6YW33 106 aa9.88□□□□□ -0.83
Pcif1-201ENSMUST00000041643 Ighv8-9A0A0G2JET1 119 aa9.88□□□□□ -0.83
Pcif1-201ENSMUST00000041643 Olfr1185-ps1F6XP16 303 aa9.88□□□□□ -0.83
Pcif1-201ENSMUST00000041643 Fabp6P51162 128 aa9.88□□□□□ -0.83
Pcif1-201ENSMUST00000041643 Slc39a7Q31125 476 aa9.88□□□□□ -0.83
Pcif1-201ENSMUST00000041643 Olfr491Q8VG06 310 aa9.88□□□□□ -0.83
Pcif1-201ENSMUST00000041643 Stard4Q99JV5 224 aa9.88□□□□□ -0.83
Pcif1-201ENSMUST00000041643 Arpc1aQ9R0Q6 370 aa9.88□□□□□ -0.83
Pcif1-201ENSMUST00000041643 Rnf217D3YYI7 515 aa9.88□□□□□ -0.83
Pcif1-201ENSMUST00000041643 Zfp648D3Z0W3 525 aa9.88□□□□□ -0.83
Pcif1-201ENSMUST00000041643 Cxcl2P10889 100 aa9.88□□□□□ -0.83
Pcif1-201ENSMUST00000041643 Cox6a1P43024 111 aa9.88□□□□□ -0.83
Pcif1-201ENSMUST00000041643 KncnQ307W7 124 aa9.88□□□□□ -0.83
Pcif1-201ENSMUST00000041643 Zg16Q8K0C5 167 aa9.88□□□□□ -0.83
Pcif1-201ENSMUST00000041643 Mrpl18Q9CQL5 180 aa9.88□□□□□ -0.83
Pcif1-201ENSMUST00000041643 Ighv7-4A0A0A6YXL5 121 aa9.88□□□□□ -0.83
Pcif1-201ENSMUST00000041643 Hspb7P35385 169 aa9.88□□□□□ -0.83
Pcif1-201ENSMUST00000041643 Eda2rQ8BX35 297 aa9.88□□□□□ -0.83
Pcif1-201ENSMUST00000041643 Smim8Q9CQQ0 97 aa9.88□□□□□ -0.83
Pcif1-201ENSMUST00000041643 Kcnmb2Q9CZM9 235 aa9.88□□□□□ -0.83
Pcif1-201ENSMUST00000041643 Smdt1Q9DB10 107 aa9.88□□□□□ -0.83
Pcif1-201ENSMUST00000041643 Gpr34Q9R1K6 375 aa9.88□□□□□ -0.83
Pcif1-201ENSMUST00000041643 Dock11A2AF47 2073 aa9.87□□□□□ -0.83
Pcif1-201ENSMUST00000041643 Zfp980A2A9J5 645 aa9.87□□□□□ -0.83
Pcif1-201ENSMUST00000041643 Tmem8bB1AWJ5 472 aa9.87□□□□□ -0.83
Pcif1-201ENSMUST00000041643 SnrpeP62305 92 aaKnown RBP9.87□□□□□ -0.83
Pcif1-201ENSMUST00000041643 Ceacam12Q3UKP4 300 aa9.87□□□□□ -0.83
Pcif1-201ENSMUST00000041643 Repin1Q5U4E2 545 aa9.87□□□□□ -0.83
Pcif1-201ENSMUST00000041643 Olfr1009Q8VFK1 314 aa9.87□□□□□ -0.83
Pcif1-201ENSMUST00000041643 S100a4P07091 101 aa9.87□□□□□ -0.83
Pcif1-201ENSMUST00000041643 Sult2a2P50236 285 aa9.87□□□□□ -0.83
Pcif1-201ENSMUST00000041643 Morn2Q6UL01 79 aa9.87□□□□□ -0.83
Pcif1-201ENSMUST00000041643 Olfr275Q7TS18 319 aa9.87□□□□□ -0.83
Pcif1-201ENSMUST00000041643 Tm2d3Q8BJ83 261 aa9.87□□□□□ -0.83
Pcif1-201ENSMUST00000041643 IqcjQ8BPW0 110 aa9.87□□□□□ -0.83
Pcif1-201ENSMUST00000041643 IcosQ9WVS0 200 aa9.87□□□□□ -0.83
Pcif1-201ENSMUST00000041643 Rpl30P62889 115 aaKnown RBP9.87□□□□□ -0.83
Pcif1-201ENSMUST00000041643 C130073F10RikQ8C4L8 201 aa9.87□□□□□ -0.83
Pcif1-201ENSMUST00000041643 Tmem212Q8C6V3 187 aa9.87□□□□□ -0.83
Pcif1-201ENSMUST00000041643 Dcbld1Q9D4J3 503 aa9.87□□□□□ -0.83
Pcif1-201ENSMUST00000041643 Rnf125Q9D9R0 233 aa9.87□□□□□ -0.83
Pcif1-201ENSMUST00000041643 Tcf20Q9EPQ8 1987 aa9.87□□□□□ -0.83
Pcif1-201ENSMUST00000041643 Wnt5bP22726 359 aa9.87□□□□□ -0.83
Pcif1-201ENSMUST00000041643 Dlx1Q64317 255 aa9.87□□□□□ -0.83
Pcif1-201ENSMUST00000041643 Olfr1199Q8VF94 310 aa9.87□□□□□ -0.83
Pcif1-201ENSMUST00000041643 Zfand2bQ91X58 257 aa9.87□□□□□ -0.83
Pcif1-201ENSMUST00000041643 Opn3Q9WUK7 400 aa9.87□□□□□ -0.83
Pcif1-201ENSMUST00000041643 Gm21310J3QQ23 232 aa9.86□□□□□ -0.83
Pcif1-201ENSMUST00000041643 Hmx3P42581 356 aa9.86□□□□□ -0.83
Pcif1-201ENSMUST00000041643 Cd200r4Q6XJV4 270 aa9.86□□□□□ -0.83
Pcif1-201ENSMUST00000041643 Olfr411Q7TRW8 315 aa9.86□□□□□ -0.83
Pcif1-201ENSMUST00000041643 Cldn16Q925N4 235 aa9.86□□□□□ -0.83
Pcif1-201ENSMUST00000041643 Pmaip1Q9JM54 103 aa9.86□□□□□ -0.83
Pcif1-201ENSMUST00000041643 Igkv6-15A0A140T8M5 115 aa9.86□□□□□ -0.83
Pcif1-201ENSMUST00000041643 Gm45783A0A1B0GT48 74 aa9.86□□□□□ -0.83
Pcif1-201ENSMUST00000041643 A0A1Y7VLU2 103 aa9.86□□□□□ -0.83
Pcif1-201ENSMUST00000041643 Trav12d-1A0N8R0 115 aa9.86□□□□□ -0.83
Pcif1-201ENSMUST00000041643 Olfr1016A2ASV2 309 aa9.86□□□□□ -0.83
Pcif1-201ENSMUST00000041643 HrkP62816 92 aa9.86□□□□□ -0.83
Pcif1-201ENSMUST00000041643 Gm9Q3UKW5 162 aa9.86□□□□□ -0.83
Pcif1-201ENSMUST00000041643 Znf250Q7TNU6 535 aa9.86□□□□□ -0.83
Pcif1-201ENSMUST00000041643 Vmn1r235Q8R297 328 aa9.86□□□□□ -0.83
Pcif1-201ENSMUST00000041643 D1Ertd622eQ8VEB3 207 aa9.86□□□□□ -0.83
Pcif1-201ENSMUST00000041643 Ccpg1osV9GXK1 122 aa9.86□□□□□ -0.83
Pcif1-201ENSMUST00000041643 Gm5741B2RVA4 72 aa9.86□□□□□ -0.83
Pcif1-201ENSMUST00000041643 Gm4792Q569Q2 183 aa9.86□□□□□ -0.83
Pcif1-201ENSMUST00000041643 Cd200r1lQ6XJV6 249 aa9.86□□□□□ -0.83
Retrieved 100 of 22,080 RNA–protein pairs in 34.6 ms