RNA–Protein interactions for RNA: ENST00000642072.1

LINC00339-212, long intergenic non-protein coding RNA 339, humanhuman

Gene LINC00339, Length 338 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-212ENST00000642072 DEFB104AQ8WTQ1 72 aa5.71□□□□□ -1.5
LINC00339-212ENST00000642072 SDHCQ99643 169 aaPredicted RBP5.71□□□□□ -1.5
LINC00339-212ENST00000642072 C11orf1Q9H5F2 150 aa5.71□□□□□ -1.5
LINC00339-212ENST00000642072 ZNF492Q9P255 531 aa5.71□□□□□ -1.5
LINC00339-212ENST00000642072 FLVCR2Q9UPI3 526 aa5.71□□□□□ -1.5
LINC00339-212ENST00000642072 WDR83OSQ9Y284 106 aa5.71□□□□□ -1.5
LINC00339-212ENST00000642072 IGKV2-40A0A087WW87 121 aaPredicted RBP5.7□□□□□ -1.5
LINC00339-212ENST00000642072 TRGV4A0A0C4DH28 118 aa5.7□□□□□ -1.5
LINC00339-212ENST00000642072 IGHV3-38A0A0C4DH36 116 aa5.7□□□□□ -1.5
LINC00339-212ENST00000642072 TRBV7-9A0A0J9YWB2 115 aa5.7□□□□□ -1.5
LINC00339-212ENST00000642072 IBA57-AS1B1ANH7 110 aa5.7□□□□□ -1.5
LINC00339-212ENST00000642072 NDUFB6O95139 128 aa5.7□□□□□ -1.5
LINC00339-212ENST00000642072 SCGB1D2O95969 90 aa5.7□□□□□ -1.5
LINC00339-212ENST00000642072 IGKV2D-40P01614 121 aaPredicted RBP5.7□□□□□ -1.5
LINC00339-212ENST00000642072 ORM1P02763 201 aa5.7□□□□□ -1.5
LINC00339-212ENST00000642072 PYYP10082 97 aa5.7□□□□□ -1.5
LINC00339-212ENST00000642072 HIST1H1EP10412 219 aaKnown RBP5.7□□□□□ -1.5
LINC00339-212ENST00000642072 Q6ZRG5 221 aa5.7□□□□□ -1.5
LINC00339-212ENST00000642072 OR1L4Q8NGR5 311 aa5.7□□□□□ -1.5
LINC00339-212ENST00000642072 PFDN5Q99471 154 aa5.7□□□□□ -1.5
LINC00339-212ENST00000642072 SRRQ9GZT4 340 aa5.7□□□□□ -1.5
LINC00339-212ENST00000642072 SLC39A9Q9NUM3 307 aa5.7□□□□□ -1.5
LINC00339-212ENST00000642072 PRELID1Q9Y255 219 aa5.7□□□□□ -1.5
LINC00339-212ENST00000642072 LOC100131303A0A0U1RQF7 123 aa5.69□□□□□ -1.5
LINC00339-212ENST00000642072 PSCAO43653 123 aa5.69□□□□□ -1.5
LINC00339-212ENST00000642072 RPL29P47914 159 aaKnown RBP5.69□□□□□ -1.5
LINC00339-212ENST00000642072 ASAH1Q13510 395 aa5.69□□□□□ -1.5
LINC00339-212ENST00000642072 Q8TAT8 98 aa5.69□□□□□ -1.5
LINC00339-212ENST00000642072 MITD1Q8WV92 249 aa5.69□□□□□ -1.5
LINC00339-212ENST00000642072 FAM167A-AS1Q96KT0 104 aa5.69□□□□□ -1.5
LINC00339-212ENST00000642072 ARPC5LQ9BPX5 153 aa5.69□□□□□ -1.5
LINC00339-212ENST00000642072 TXNDC17Q9BRA2 123 aa5.69□□□□□ -1.5
LINC00339-212ENST00000642072 TRAV4A0A0B4J268 109 aa5.68□□□□□ -1.5
LINC00339-212ENST00000642072 C9JCJ5 164 aa5.68□□□□□ -1.5
LINC00339-212ENST00000642072 ATP6V1G1O75348 118 aa5.68□□□□□ -1.5
LINC00339-212ENST00000642072 CST7O76096 145 aa5.68□□□□□ -1.5
LINC00339-212ENST00000642072 BTCP35070 178 aa5.68□□□□□ -1.5
LINC00339-212ENST00000642072 ZNF138P52744 262 aa5.68□□□□□ -1.5
LINC00339-212ENST00000642072 RAB31Q13636 194 aa5.68□□□□□ -1.5
LINC00339-212ENST00000642072 ZNF266Q14584 549 aa5.68□□□□□ -1.5
LINC00339-212ENST00000642072 GCSAMLQ5JQS6 135 aa5.68□□□□□ -1.5
LINC00339-212ENST00000642072 MUC21Q5SSG8 566 aa5.68□□□□□ -1.5
LINC00339-212ENST00000642072 TMEM78Q5T7P6 136 aa5.68□□□□□ -1.5
LINC00339-212ENST00000642072 FAM122CQ6P4D5 195 aa5.68□□□□□ -1.5
LINC00339-212ENST00000642072 AKAP14Q86UN6 197 aa5.68□□□□□ -1.5
LINC00339-212ENST00000642072 C12orf45Q8N5I9 185 aaPredicted RBP5.68□□□□□ -1.5
LINC00339-212ENST00000642072 BLNKQ8WV28 456 aa5.68□□□□□ -1.5
LINC00339-212ENST00000642072 PCNPQ8WW12 178 aaKnown RBP5.68□□□□□ -1.5
LINC00339-212ENST00000642072 SLC25A2Q9BXI2 301 aa5.68□□□□□ -1.5
LINC00339-212ENST00000642072 UQCC1Q9NVA1 299 aa5.68□□□□□ -1.5
LINC00339-212ENST00000642072 GSKIPQ9P0R6 139 aa5.68□□□□□ -1.5
LINC00339-212ENST00000642072 TIMM9Q9Y5J7 89 aa5.68□□□□□ -1.5
LINC00339-212ENST00000642072 IL7P13232 177 aa5.67□□□□□ -1.5
LINC00339-212ENST00000642072 GATA1P15976 413 aaPredicted RBP5.67□□□□□ -1.5
LINC00339-212ENST00000642072 NDUFA5Q16718 116 aa5.67□□□□□ -1.5
LINC00339-212ENST00000642072 TDRG1Q3Y452 100 aa5.67□□□□□ -1.5
LINC00339-212ENST00000642072 Q6AWC8 147 aa5.67□□□□□ -1.5
LINC00339-212ENST00000642072 SCXQ7RTU7 201 aa5.67□□□□□ -1.5
LINC00339-212ENST00000642072 SH2D6Q7Z4S9 175 aa5.67□□□□□ -1.5
LINC00339-212ENST00000642072 SYT8Q8NBV8 401 aa5.67□□□□□ -1.5
LINC00339-212ENST00000642072 SPXQ9BT56 116 aa5.67□□□□□ -1.5
LINC00339-212ENST00000642072 Q9HAA7 133 aa5.67□□□□□ -1.5
LINC00339-212ENST00000642072 UBE2L5PA0A1B0GUS4 154 aa5.66□□□□□ -1.5
LINC00339-212ENST00000642072 NAP1L6A6NFF2 107 aa5.66□□□□□ -1.5
LINC00339-212ENST00000642072 FAM24AA6NFZ4 105 aa5.66□□□□□ -1.5
LINC00339-212ENST00000642072 CCSO14618 274 aa5.66□□□□□ -1.5
LINC00339-212ENST00000642072 OXTP01178 125 aa5.66□□□□□ -1.5
LINC00339-212ENST00000642072 CAV2P51636 162 aa5.66□□□□□ -1.5
LINC00339-212ENST00000642072 LAGE3Q14657 143 aa5.66□□□□□ -1.5
LINC00339-212ENST00000642072 BAK1Q16611 211 aa5.66□□□□□ -1.5
LINC00339-212ENST00000642072 TMEM183BQ1AE95 376 aa5.66□□□□□ -1.5
LINC00339-212ENST00000642072 TMEM183AQ8IXX5 376 aa5.66□□□□□ -1.5
LINC00339-212ENST00000642072 FXYD5Q96DB9 178 aa5.66□□□□□ -1.5
LINC00339-212ENST00000642072 PHYHIPLQ96FC7 376 aa5.66□□□□□ -1.5
LINC00339-212ENST00000642072 SLC25A31Q9H0C2 315 aa5.66□□□□□ -1.5
LINC00339-212ENST00000642072 AAMDCQ9H7C9 122 aa5.66□□□□□ -1.5
LINC00339-212ENST00000642072 LYRM2Q9NU23 88 aaPredicted RBP5.66□□□□□ -1.5
LINC00339-212ENST00000642072 PLA2G2DQ9UNK4 145 aa5.66□□□□□ -1.5
LINC00339-212ENST00000642072 IGHV3-16A0A0C4DH30 117 aa5.65□□□□□ -1.5
LINC00339-212ENST00000642072 IGSF23A1L1A6 192 aa5.65□□□□□ -1.5
LINC00339-212ENST00000642072 RBAKDNA6NC62 111 aa5.65□□□□□ -1.5
LINC00339-212ENST00000642072 L7N2F9 121 aa5.65□□□□□ -1.5
LINC00339-212ENST00000642072 NBEAP1P0C6P0 100 aa5.65□□□□□ -1.5
LINC00339-212ENST00000642072 SULT1A1P50225 295 aa5.65□□□□□ -1.5
LINC00339-212ENST00000642072 PPT1P50897 306 aa5.65□□□□□ -1.5
LINC00339-212ENST00000642072 VAMP2P63027 116 aa5.65□□□□□ -1.5
LINC00339-212ENST00000642072 BAXQ07812 192 aa5.65□□□□□ -1.5
LINC00339-212ENST00000642072 IL15RAQ13261 267 aa5.65□□□□□ -1.5
LINC00339-212ENST00000642072 MIR17HGQ75NE6 70 aa5.65□□□□□ -1.5
LINC00339-212ENST00000642072 Q8N3U1 123 aa5.65□□□□□ -1.5
LINC00339-212ENST00000642072 NHLRC2Q8NBF2 726 aa5.65□□□□□ -1.5
LINC00339-212ENST00000642072 OR4C5Q8NGB2 326 aa5.65□□□□□ -1.5
LINC00339-212ENST00000642072 NPCDR1Q9BY65 106 aa5.65□□□□□ -1.5
LINC00339-212ENST00000642072 C20orf85Q9H1P6 137 aa5.65□□□□□ -1.5
LINC00339-212ENST00000642072 TNXBP22105 4242 aa5.64□□□□□ -1.51
LINC00339-212ENST00000642072 TRGV11A0A075B6L2 103 aa5.64□□□□□ -1.51
LINC00339-212ENST00000642072 M0R2P5 195 aa5.64□□□□□ -1.51
LINC00339-212ENST00000642072 IGHV3-30P01768 117 aa5.64□□□□□ -1.51
LINC00339-212ENST00000642072 IGHV3-33P01772 117 aa5.64□□□□□ -1.51
LINC00339-212ENST00000642072 IGHV3-30-3P0DP02 117 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms