RNA–Protein interactions for RNA: ENST00000637538.1

CLCN2-220, Transcript of chloride voltage-gated channel 2, humanhuman

TSL 5

Gene CLCN2, Length 1,545 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN2-220ENST00000637538 PRR27Q6MZM9 219 aa12.44□□□□□ -0.42
CLCN2-220ENST00000637538 WFDC9Q8NEX5 89 aa12.44□□□□□ -0.42
CLCN2-220ENST00000637538 NUDT10Q8NFP7 164 aa12.44□□□□□ -0.42
CLCN2-220ENST00000637538 NUDT11Q96G61 164 aa12.44□□□□□ -0.42
CLCN2-220ENST00000637538 SAV1Q9H4B6 383 aaPredicted RBP12.44□□□□□ -0.42
CLCN2-220ENST00000637538 MAP6D1Q9H9H5 199 aa12.44□□□□□ -0.42
CLCN2-220ENST00000637538 SORL1Q92673 2214 aa12.43□□□□□ -0.42
CLCN2-220ENST00000637538 TYMSP04818 313 aa12.43□□□□□ -0.42
CLCN2-220ENST00000637538 S100A6P06703 90 aa12.43□□□□□ -0.42
CLCN2-220ENST00000637538 FOXI2Q6ZQN5 318 aa12.43□□□□□ -0.42
CLCN2-220ENST00000637538 NDFIP1Q9BT67 221 aa12.43□□□□□ -0.42
CLCN2-220ENST00000637538 TRAV9-1A0A075B6T8 112 aa12.42□□□□□ -0.42
CLCN2-220ENST00000637538 A8MTW9 85 aa12.42□□□□□ -0.42
CLCN2-220ENST00000637538 INSL3P51460 131 aa12.42□□□□□ -0.42
CLCN2-220ENST00000637538 ZNF80P51504 273 aaPredicted RBP12.42□□□□□ -0.42
CLCN2-220ENST00000637538 DEFB131AP59861 70 aa12.42□□□□□ -0.42
CLCN2-220ENST00000637538 BEAN1Q3B7T3 259 aa12.42□□□□□ -0.42
CLCN2-220ENST00000637538 ODF3L2Q3SX64 289 aa12.42□□□□□ -0.42
CLCN2-220ENST00000637538 ZFAND2AQ8N6M9 145 aa12.42□□□□□ -0.42
CLCN2-220ENST00000637538 TRRAPQ9Y4A5 3859 aa12.42□□□□□ -0.42
CLCN2-220ENST00000637538 C5orf52A6NGY3 159 aa12.42□□□□□ -0.42
CLCN2-220ENST00000637538 CRISP2P16562 243 aa12.42□□□□□ -0.42
CLCN2-220ENST00000637538 SMUG1Q53HV7 270 aa12.42□□□□□ -0.42
CLCN2-220ENST00000637538 APRG1Q8IVJ8 170 aa12.42□□□□□ -0.42
CLCN2-220ENST00000637538 ODF3Q96PU9 254 aa12.42□□□□□ -0.42
CLCN2-220ENST00000637538 IL36BQ9NZH7 164 aa12.42□□□□□ -0.42
CLCN2-220ENST00000637538 A0A1W2PPQ1 181 aa12.41□□□□□ -0.42
CLCN2-220ENST00000637538 TRGC2P03986 189 aa12.41□□□□□ -0.42
CLCN2-220ENST00000637538 FAM3BP58499 235 aaPredicted RBP12.41□□□□□ -0.42
CLCN2-220ENST00000637538 EBLN2Q6P2I7 272 aa12.41□□□□□ -0.42
CLCN2-220ENST00000637538 GATCO43716 136 aaKnown RBP12.4□□□□□ -0.42
CLCN2-220ENST00000637538 SH2D1AO60880 128 aa12.4□□□□□ -0.42
CLCN2-220ENST00000637538 DUSP14O95147 198 aaKnown RBP12.4□□□□□ -0.42
CLCN2-220ENST00000637538 HLA-DRB4P13762 266 aa12.4□□□□□ -0.42
CLCN2-220ENST00000637538 CD33P20138 364 aa12.4□□□□□ -0.42
CLCN2-220ENST00000637538 CT83Q5H943 113 aa12.4□□□□□ -0.42
CLCN2-220ENST00000637538 FAM162BQ5T6X4 162 aa12.4□□□□□ -0.42
CLCN2-220ENST00000637538 PRR9Q5T870 116 aa12.4□□□□□ -0.42
CLCN2-220ENST00000637538 C9orf66Q5T8R8 295 aa12.4□□□□□ -0.42
CLCN2-220ENST00000637538 AMTNQ6UX39 209 aa12.4□□□□□ -0.42
CLCN2-220ENST00000637538 OR4B1Q8NGF8 309 aa12.4□□□□□ -0.42
CLCN2-220ENST00000637538 FAM110AQ9BQ89 295 aa12.4□□□□□ -0.42
CLCN2-220ENST00000637538 RPP21Q9H633 154 aaKnown RBP12.4□□□□□ -0.42
CLCN2-220ENST00000637538 HLA-DRB4X5D2U9 266 aa12.4□□□□□ -0.42
CLCN2-220ENST00000637538 ZNF705GA8MUZ8 300 aaPredicted RBP12.39□□□□□ -0.43
CLCN2-220ENST00000637538 PHOX2AO14813 284 aa12.39□□□□□ -0.43
CLCN2-220ENST00000637538 WIPF1O43516 503 aa12.39□□□□□ -0.43
CLCN2-220ENST00000637538 P01737 135 aa12.39□□□□□ -0.43
CLCN2-220ENST00000637538 SNRPEP62304 92 aaKnown RBP12.39□□□□□ -0.43
CLCN2-220ENST00000637538 KNCNA6PVL3 124 aa12.38□□□□□ -0.43
CLCN2-220ENST00000637538 KLLNB2CW77 178 aa12.38□□□□□ -0.43
CLCN2-220ENST00000637538 H3BMM0 161 aa12.38□□□□□ -0.43
CLCN2-220ENST00000637538 UBE2CO00762 179 aa12.38□□□□□ -0.43
CLCN2-220ENST00000637538 ZNF124Q15973 351 aa12.38□□□□□ -0.43
CLCN2-220ENST00000637538 DAZAP1Q96EP5 407 aaKnown RBP12.38□□□□□ -0.43
CLCN2-220ENST00000637538 C19orf73Q9NVV2 129 aa12.38□□□□□ -0.43
CLCN2-220ENST00000637538 SMIM27A0A1W2PRY6 76 aa12.37□□□□□ -0.43
CLCN2-220ENST00000637538 CA1P00915 261 aaPredicted RBP12.37□□□□□ -0.43
CLCN2-220ENST00000637538 ZNF575Q86XF7 245 aa12.37□□□□□ -0.43
CLCN2-220ENST00000637538 CLUHP3Q96NS8 147 aa12.37□□□□□ -0.43
CLCN2-220ENST00000637538 MCRIP2Q9BUT9 160 aaKnown RBP12.37□□□□□ -0.43
CLCN2-220ENST00000637538 AGRNO00468 2067 aa12.37□□□□□ -0.43
CLCN2-220ENST00000637538 FABP5P3A8MUU1 101 aa12.37□□□□□ -0.43
CLCN2-220ENST00000637538 CMC4P56277 68 aaPredicted RBP12.37□□□□□ -0.43
CLCN2-220ENST00000637538 ACTL10Q5JWF8 245 aa12.37□□□□□ -0.43
CLCN2-220ENST00000637538 TSKUQ8WUA8 353 aa12.37□□□□□ -0.43
CLCN2-220ENST00000637538 FRZBQ92765 325 aa12.37□□□□□ -0.43
CLCN2-220ENST00000637538 RBMY1BA6NDE4 496 aaKnown RBP12.36□□□□□ -0.43
CLCN2-220ENST00000637538 RBMY1EA6NEQ0 496 aaKnown RBP12.36□□□□□ -0.43
CLCN2-220ENST00000637538 OR11H12B2RN74 326 aa12.36□□□□□ -0.43
CLCN2-220ENST00000637538 HIST1H2BKO60814 126 aa12.36□□□□□ -0.43
CLCN2-220ENST00000637538 HIST1H2BJP06899 126 aa12.36□□□□□ -0.43
CLCN2-220ENST00000637538 CD7P09564 240 aa12.36□□□□□ -0.43
CLCN2-220ENST00000637538 RBMY1DP0C7P1 496 aaKnown RBP12.36□□□□□ -0.43
CLCN2-220ENST00000637538 TRGC1P0CF51 173 aa12.36□□□□□ -0.43
CLCN2-220ENST00000637538 HIST1H2BOP23527 126 aa12.36□□□□□ -0.43
CLCN2-220ENST00000637538 HIST1H2BBP33778 126 aa12.36□□□□□ -0.43
CLCN2-220ENST00000637538 HIST1H2BDP58876 126 aa12.36□□□□□ -0.43
CLCN2-220ENST00000637538 HIST1H2BCP62807 126 aa12.36□□□□□ -0.43
CLCN2-220ENST00000637538 RPL19P84098 196 aaKnown RBP12.36□□□□□ -0.43
CLCN2-220ENST00000637538 KIR3DS1Q14943 382 aa12.36□□□□□ -0.43
CLCN2-220ENST00000637538 HIST2H2BEQ16778 126 aa12.36□□□□□ -0.43
CLCN2-220ENST00000637538 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.36□□□□□ -0.43
CLCN2-220ENST00000637538 Q6AWC8 147 aa12.36□□□□□ -0.43
CLCN2-220ENST00000637538 HIST1H2BHQ93079 126 aa12.36□□□□□ -0.43
CLCN2-220ENST00000637538 HIST1H2BNQ99877 126 aa12.36□□□□□ -0.43
CLCN2-220ENST00000637538 HIST1H2BMQ99879 126 aa12.36□□□□□ -0.43
CLCN2-220ENST00000637538 C11orf21Q9P2W6 132 aa12.36□□□□□ -0.43
CLCN2-220ENST00000637538 NOTCH3Q9UM47 2321 aa12.35□□□□□ -0.43
CLCN2-220ENST00000637538 LEPP41159 167 aa12.35□□□□□ -0.43
CLCN2-220ENST00000637538 LINC01559Q495D7 138 aa12.35□□□□□ -0.43
CLCN2-220ENST00000637538 PRR31Q5SQ13 230 aa12.35□□□□□ -0.43
CLCN2-220ENST00000637538 Q6ZQT7 251 aa12.35□□□□□ -0.43
CLCN2-220ENST00000637538 OR2D3Q8NGH3 330 aa12.35□□□□□ -0.43
CLCN2-220ENST00000637538 CMYA5Q8N3K9 4069 aa12.34□□□□□ -0.43
CLCN2-220ENST00000637538 FAM231BA6NCW3 169 aa12.34□□□□□ -0.43
CLCN2-220ENST00000637538 A8MWL6 223 aa12.34□□□□□ -0.43
CLCN2-220ENST00000637538 HOXA5P20719 270 aa12.34□□□□□ -0.43
CLCN2-220ENST00000637538 FABP9Q0Z7S8 132 aa12.34□□□□□ -0.43
CLCN2-220ENST00000637538 GFRA4Q9GZZ7 299 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms